Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
744,753 |
C→T |
A122A (GCC→GCT) |
ybgL → |
putative lactam utilization protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 744,753 | 0 | C | T | 99.5%
| 736.7
/ ‑5.2
| 207 | A122A (GCC→GCT) | ybgL | putative lactam utilization protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (101/105); total (102/105) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.37e-01 |
Only 100 of 212 total aligned reads displayed.
GCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATG > NC_000913/744664‑744841
|
gCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATc < 1:4169072/93‑1 (MQ=255)
gCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATc < 2:3753084/93‑1 (MQ=255)
cccGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCg > 2:1514939/1‑93 (MQ=255)
ccGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGc > 2:3917182/1‑93 (MQ=255)
gTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCa > 2:1954056/1‑93 (MQ=255)
gTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCa < 2:2378229/93‑1 (MQ=255)
gTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCa < 1:2098437/93‑1 (MQ=255)
gcgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCaga > 2:2654816/1‑93 (MQ=255)
gcgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCaga < 2:4094367/93‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCagag < 2:1442492/93‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCagag < 1:6465860/93‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCagag < 1:4829138/93‑1 (MQ=255)
cgcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCagag < 1:3628921/93‑1 (MQ=255)
gcAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGc < 1:3397183/93‑1 (MQ=255)
cAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCg > 2:2689524/1‑93 (MQ=255)
aaGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCgg < 1:1087806/93‑1 (MQ=255)
aGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGt > 1:2839937/1‑93 (MQ=255)
aGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGt < 1:5494231/93‑1 (MQ=255)
aGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGt > 1:3898052/1‑93 (MQ=255)
ggcggcGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGta < 1:2488965/93‑1 (MQ=255)
ggcggcGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGta < 1:2747721/93‑1 (MQ=255)
ggcggcGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGta < 1:157777/93‑1 (MQ=255)
gcgTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACg > 2:4679216/1‑93 (MQ=255)
gTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCt < 1:909857/93‑1 (MQ=255)
tAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCtt < 2:1169568/93‑1 (MQ=255)
tAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCtt > 1:6144999/1‑93 (MQ=255)
tAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCtt < 1:5401916/93‑1 (MQ=255)
tAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCtt > 2:4629648/1‑93 (MQ=255)
aTGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGc > 2:3769561/1‑93 (MQ=255)
cGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGAt < 2:3651743/93‑1 (MQ=255)
gTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATc > 2:1758433/1‑93 (MQ=255)
tCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATcc < 2:3444666/93‑1 (MQ=255)
tCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATcc > 2:21648/1‑93 (MQ=255)
cATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCa < 1:3060514/93‑1 (MQ=255)
aTGTCAAACCGCACGGCATGTTGTACAGCCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAg < 1:654056/93‑1 (MQ=255)
aTGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAg < 1:3967037/93‑1 (MQ=255)
tGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGc > 1:2234037/1‑93 (MQ=255)
tGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGc < 2:1390843/93‑1 (MQ=255)
tCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCAt < 1:4607167/93‑1 (MQ=255)
aaCCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGa > 2:4984522/1‑93 (MQ=255)
ccGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGAtt < 2:2941091/93‑1 (MQ=255)
cGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATtc < 2:1300007/93‑1 (MQ=255)
gCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATtct > 2:1809516/1‑93 (MQ=255)
cACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATtctc > 2:3049368/1‑93 (MQ=255)
aCGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcg > 2:6021252/1‑93 (MQ=255)
aCGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcg > 1:5639932/1‑93 (MQ=255)
cGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgt < 2:4875372/93‑1 (MQ=255)
cGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgt > 2:1713175/1‑93 (MQ=255)
cGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgt > 1:6432893/1‑93 (MQ=255)
cGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgt > 2:5693478/1‑93 (MQ=255)
ggCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgtc < 1:2425705/93‑1 (MQ=255)
ggCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgtc < 1:5575186/93‑1 (MQ=255)
ggCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgtc > 1:2046038/1‑93 (MQ=255)
ggCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCtcgtc > 1:2375748/1‑93 (MQ=255)
cATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCgg < 2:5660232/93‑1 (MQ=255)
tgttgtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCgggt > 2:2145585/1‑92 (MQ=255)
tgttgtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGc < 1:1828147/93‑1 (MQ=255)
tgtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTgg > 2:848819/1‑93 (MQ=255)
tgtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTgg < 1:5787881/93‑1 (MQ=255)
gtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGc > 1:229170/1‑93 (MQ=255)
gtACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGc > 1:4015012/1‑93 (MQ=255)
aCAACCAGGCGGCGAAAGAAGCAGAACTGGAAGAAGGTATCGCCAGCACGGTATAAGCTTGCGATCCAGCATTGATTCTCGTCGCGCgggggg > 2:381984/1‑93 (MQ=255)
cAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCggg < 2:3217720/93‑1 (MQ=255)
aaCCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGa > 2:2572595/1‑93 (MQ=255)
cAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGc > 1:1441975/1‑93 (MQ=255)
cAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGc < 1:3683699/93‑1 (MQ=255)
cAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGc > 1:3204508/1‑93 (MQ=255)
cAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGGAGc > 2:4746032/1‑93 (MQ=255)
aGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGCAGCg > 1:6375169/1‑93 (MQ=255)
aGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCg < 1:1281339/93‑1 (MQ=255)
ggcggcGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGa < 2:4438746/93‑1 (MQ=255)
ggcggcGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGa > 1:1351104/1‑93 (MQ=255)
gcggcgAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAg < 1:2935984/93‑1 (MQ=255)
gcggcgAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAg < 1:4341465/93‑1 (MQ=255)
cggcgAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCGAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGc < 2:4835574/93‑1 (MQ=255)
gAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGGAGCGAGCTGAt > 2:6200336/1‑93 (MQ=255)
gAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAt > 2:6392196/1‑93 (MQ=255)
gAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAt < 1:4025984/93‑1 (MQ=255)
aaaGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAtt > 2:2798893/1‑93 (MQ=255)
aaaGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAtt > 1:4966520/1‑93 (MQ=255)
aaaGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAtt < 1:2383373/93‑1 (MQ=255)
aaaGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAtt < 1:1560881/93‑1 (MQ=255)
aagaagCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTc < 2:1864939/93‑1 (MQ=255)
agaagCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCg > 1:6287825/1‑93 (MQ=255)
gaagCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCgg > 2:4170889/1‑92 (MQ=255)
cacaACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGTAAGCGAGCTGATTCGTGCAg < 1:5100456/93‑1 (MQ=255)
acaACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAgg > 1:5214182/1‑93 (MQ=255)
acaACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAgg > 2:4484661/1‑93 (MQ=255)
acaACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAgg > 2:5382854/1‑93 (MQ=255)
caACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGTGCTGGCGGGAAGCGAGCTGATTCGTGCAGgc > 1:3142652/1‑93 (MQ=255)
caACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgc < 2:2485343/93‑1 (MQ=255)
aaCTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgca < 2:1653648/93‑1 (MQ=255)
aaCTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgca > 1:3439256/1‑93 (MQ=255)
aaCTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgca < 2:1097259/93‑1 (MQ=255)
aCTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgcaa < 1:5826141/93‑1 (MQ=255)
aCTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgcaa < 1:1261851/93‑1 (MQ=255)
cTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgcaag < 1:2631698/93‑1 (MQ=255)
cTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGgcaag < 1:3473162/93‑1 (MQ=255)
cAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAat < 2:4521330/93‑1 (MQ=255)
aCGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTTATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATg > 1:1749137/1‑93 (MQ=255)
|
GCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATG > NC_000913/744664‑744841
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCTG > NC_000913/744660‑744846
|
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCATGCGGCGAAAGAAGCACAACTGGCAGACGCT < SRR4302537.1925877/94‑1 (MQ=60)
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCT < SRR4302537.5338238/94‑1 (MQ=60)
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCT > SRR4302537.3397489/1‑94 (MQ=60)
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCT > SRR4302537.5517969/1‑94 (MQ=60)
ATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTA > SRR4302537.1271414/1‑94 (MQ=60)
ATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTA > SRR4302537.1255359/1‑94 (MQ=60)
TTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTAT < SRR4302537.2655993/94‑1 (MQ=60)
TTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTAT < SRR4302537.3793725/94‑1 (MQ=60)
GCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCG < SRR4302537.4198192/94‑1 (MQ=60)
CCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGC > SRR4302537.1285796/1‑94 (MQ=60)
CCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCC > SRR4302537.2364847/1‑94 (MQ=60)
CGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCA < SRR4302537.3166858/94‑1 (MQ=60)
GTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAG < SRR4302537.2113236/94‑1 (MQ=60)
GTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAG > SRR4302537.5476633/1‑94 (MQ=60)
CGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGC < SRR4302537.4862495/94‑1 (MQ=60)
CGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGC < SRR4302537.3654496/94‑1 (MQ=60)
CGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGC < SRR4302537.6509655/94‑1 (MQ=60)
CGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGACAGAGG > SRR4302537.1226749/1‑94 (MQ=60)
GCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCG < SRR4302537.3421242/94‑1 (MQ=60)
CAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGG < SRR4302537.1478047/94‑1 (MQ=60)
CAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGG > SRR4302537.3480480/1‑94 (MQ=60)
AAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGT < SRR4302537.1095318/94‑1 (MQ=60)
AAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGT > SRR4302537.3925303/1‑94 (MQ=60)
AAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGT > SRR4302537.2859812/1‑94 (MQ=60)
AGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTA < SRR4302537.5531743/94‑1 (MQ=60)
GGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTAT < SRR4302537.2766885/94‑1 (MQ=60)
GGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTAT < SRR4302537.2506499/94‑1 (MQ=60)
GGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTAT < SRR4302537.158898/94‑1 (MQ=60)
CGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATAC > SRR4302537.1643877/1‑94 (MQ=60)
GGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACG < SRR4302537.2610532/94‑1 (MQ=60)
CGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCT > SRR4302537.3458207/1‑94 (MQ=60)
GTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTT < SRR4302537.3449204/94‑1 (MQ=60)
GTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTT < SRR4302537.4049423/94‑1 (MQ=60)
GTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTT > SRR4302537.533446/1‑94 (MQ=60)
GTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTT > SRR4302537.6187258/1‑94 (MQ=60)
GTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTT < SRR4302537.916137/94‑1 (MQ=60)
TAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTG < SRR4302537.5438781/94‑1 (MQ=60)
TGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGA < SRR4302537.4933751/94‑1 (MQ=60)
CATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAG < SRR4302537.2041060/94‑1 (MQ=60)
CATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAG < SRR4302537.3081839/94‑1 (MQ=60)
ATGTCAAACCGCACGGCATGTTGTACAGCCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGC < SRR4302537.658512/94‑1 (MQ=60)
ATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGC > SRR4302537.2249796/1‑94 (MQ=60)
ATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGC < SRR4302537.3994798/94‑1 (MQ=60)
GTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCAT > SRR4302537.2648216/1‑94 (MQ=60)
TCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATT > SRR4302537.5678645/1‑94 (MQ=60)
TCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATT < SRR4302537.4639071/94‑1 (MQ=60)
AAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGA > SRR4302537.3941604/1‑94 (MQ=60)
ACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATT < SRR4302537.4798495/94‑1 (MQ=60)
ACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTAGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTCATT > SRR4302537.2819118/1‑94 (MQ=60)
CGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCT > SRR4302537.2907662/1‑94 (MQ=60)
CGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCT < SRR4302537.6495982/94‑1 (MQ=60)
CGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCT > SRR4302537.1430014/1‑94 (MQ=60)
GCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTC < SRR4302537.6398300/94‑1 (MQ=60)
GCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTC < SRR4302537.6463628/94‑1 (MQ=60)
CACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCG < SRR4302537.4542770/94‑1 (MQ=60)
CACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCG > SRR4302537.5678528/1‑94 (MQ=60)
CACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCG < SRR4302537.3555552/94‑1 (MQ=60)
ACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGT > SRR4302537.6476582/1‑94 (MQ=60)
ACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGT > SRR4302537.6204062/1‑94 (MQ=60)
CGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTC > SRR4302537.2392486/1‑94 (MQ=60)
CGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTC > SRR4302537.2393944/1‑94 (MQ=60)
CGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTC > SRR4302537.2060379/1‑94 (MQ=60)
GGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCG < SRR4302537.2442797/94‑1 (MQ=60)
GGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCG < SRR4302537.5613290/94‑1 (MQ=60)
CATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGG > SRR4302537.2156053/1‑94 (MQ=60)
CATGTTGTACAACCAGGCGGCGAAAGAAGCAAAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGG < SRR4302537.4634828/94‑1 (MQ=60)
ATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGC > SRR4302537.2093075/1‑94 (MQ=60)
ATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGC > SRR4302537.657863/1‑94 (MQ=60)
TGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCT < SRR4302537.1840885/94‑1 (MQ=60)
TGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCT < SRR4302537.1840884/94‑1 (MQ=60)
GTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTG > SRR4302537.31100/1‑94 (MQ=60)
GTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTG < SRR4302537.4016398/94‑1 (MQ=60)
TGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGC < SRR4302537.5827571/94‑1 (MQ=60)
TGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGC > SRR4302537.431267/1‑94 (MQ=60)
TGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGC > SRR4302537.230792/1‑94 (MQ=60)
TGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGC > SRR4302537.4043126/1‑94 (MQ=60)
TACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGG < SRR4302537.3070155/94‑1 (MQ=60)
CAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGA > SRR4302537.650787/1‑94 (MQ=60)
CCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGGTGGCGGGgagg > SRR4302537.516596/1‑90 (MQ=60)
CCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGGAGC > SRR4302537.4071099/1‑94 (MQ=60)
CCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGC > SRR4302537.1452024/1‑94 (MQ=60)
CCAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGC > SRR4302537.3227036/1‑94 (MQ=60)
CAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGCAGCG > SRR4302537.6418648/1‑94 (MQ=60)
CAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCG < SRR4302537.3709603/94‑1 (MQ=60)
CAGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCG < SRR4302537.5842342/94‑1 (MQ=60)
AGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGA > SRR4302537.1360516/1‑94 (MQ=60)
AGGCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGA < SRR4302537.1290248/94‑1 (MQ=60)
GCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGC < SRR4302537.4371582/94‑1 (MQ=60)
GCGGCGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGC < SRR4302537.2956600/94‑1 (MQ=60)
CGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAT > SRR4302537.5113910/1‑94 (MQ=60)
CGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAT < SRR4302537.854960/94‑1 (MQ=60)
CGAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGAT < SRR4302537.3685108/94‑1 (MQ=60)
GAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATT > SRR4302537.5000749/1‑94 (MQ=60)
GAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATT > SRR4302537.4312326/1‑94 (MQ=60)
GAAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATT < SRR4302537.4054169/94‑1 (MQ=60)
AAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTC < SRR4302537.1321787/94‑1 (MQ=60)
AAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTC < SRR4302537.1571774/94‑1 (MQ=60)
AAAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTC < SRR4302537.2400163/94‑1 (MQ=60)
AAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCG > SRR4302537.6330927/1‑94 (MQ=60)
AAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCG > SRR4302537.2700236/1‑94 (MQ=60)
AAGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCG > SRR4302537.5558858/1‑94 (MQ=60)
AGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGT > SRR4302537.3867144/1‑94 (MQ=60)
AGAAGCACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGT > SRR4302537.5618616/1‑94 (MQ=60)
CACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGTAAGCGAGCTGATTCGTGCAGG < SRR4302537.5135597/94‑1 (MQ=60)
CACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGG > SRR4302537.5250035/1‑94 (MQ=60)
CACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGG < SRR4302537.5562071/94‑1 (MQ=60)
ACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGTGCTGGCGGGAAGCGAGCTGATTCGTGCAGGC > SRR4302537.3164709/1‑94 (MQ=60)
ACAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTAGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGC > SRR4302537.6078210/1‑94 (MQ=60)
CAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCA < SRR4302537.3347983/94‑1 (MQ=60)
CAACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCA > SRR4302537.3463597/1‑94 (MQ=60)
ACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAG < SRR4302537.1270626/94‑1 (MQ=60)
ACTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAG < SRR4302537.5866072/94‑1 (MQ=60)
CTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGC < SRR4302537.3497739/94‑1 (MQ=60)
CTGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGC < SRR4302537.2650124/94‑1 (MQ=60)
TGGCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCA < SRR4302537.2408841/94‑1 (MQ=60)
GCAGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAAT > SRR4302537.2261649/1‑94 (MQ=60)
AGACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATAT < SRR4302537.1866197/94‑1 (MQ=60)
GACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTTATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATG > SRR4302537.1761335/1‑94 (MQ=60)
GACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATG < SRR4302537.2451875/94‑1 (MQ=60)
GACGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATG < SRR4302537.1582314/94‑1 (MQ=60)
CGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGT > SRR4302537.5076753/1‑94 (MQ=60)
CGCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGT > SRR4302537.2484697/1‑94 (MQ=60)
GCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTC < SRR4302537.5350141/94‑1 (MQ=60)
GCTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTC < SRR4302537.2780361/94‑1 (MQ=60)
CTATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCT > SRR4302537.2009421/1‑94 (MQ=60)
TATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCTG > SRR4302537.2852800/1‑94 (MQ=60)
TATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCTG < SRR4302537.1051167/94‑1 (MQ=60)
|
GATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCTG > NC_000913/744660‑744846
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
