Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	747,172	A→G	V345A (GTG→GCG)	ybgO ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	747,172	0	A	G	99.1%	1097.7 / ‑1.2	320	V345A (GTG→GCG)	ybgO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/3); new base G (158/159); total (158/162)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01

Only 100 of 334 total aligned reads displayed.

GGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGG  >  NC_000913/747081‑747262

ggggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCt                                                                                          <  1:8539021/94‑1 (MQ=255)

 gggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTg                                                                                         <  2:10152350/94‑1 (MQ=255)

 gggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTg                                                                                         <  2:9492081/94‑1 (MQ=255)

   gAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTa                                                                                       >  1:5966865/1‑94 (MQ=255)

    aaaaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTAt                                                                                      >  1:6792694/1‑94 (MQ=255)

    aaaaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGAAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTAt                                                                                      >  2:3816342/1‑94 (MQ=255)

     aaaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATc                                                                                     <  2:1625239/94‑1 (MQ=255)

      aaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCg                                                                                    <  2:4543203/94‑1 (MQ=255)

      aaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCg                                                                                    <  2:213893/94‑1 (MQ=255)

       aTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGa                                                                                   <  1:10030978/94‑1 (MQ=255)

        tCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGaa                                                                                  <  1:5220700/94‑1 (MQ=255)

         cAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAg                                                                                 >  1:7720255/1‑94 (MQ=255)

             aaTTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGc                                                                             >  2:3006981/1‑94 (MQ=255)

              aTTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGcc                                                                            <  1:1918173/94‑1 (MQ=255)

                tttCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAg                                                                          <  1:3816319/94‑1 (MQ=255)

                  tCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGcc                                                                        >  2:2605177/1‑94 (MQ=255)

                   cTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATTGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCt                                                                       <  2:3629684/94‑1 (MQ=255)

                   cTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCt                                                                       <  1:10235799/94‑1 (MQ=255)

                   cTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCt                                                                       <  1:185971/94‑1 (MQ=255)

                    tGAAAGAGATGCCCTGTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTc                                                                      <  1:590730/94‑1 (MQ=255)

                     gAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCg                                                                     >  2:6170324/1‑94 (MQ=255)

                     gAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCg                                                                     <  2:4313352/94‑1 (MQ=255)

                     gAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCg                                                                     >  2:9590158/1‑94 (MQ=255)

                      aaaGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGa                                                                    <  2:7983813/94‑1 (MQ=255)

                       aaGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAt                                                                   >  1:5177682/1‑94 (MQ=255)

                       aaGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAt                                                                   >  1:2452574/1‑94 (MQ=255)

                       aaGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAt                                                                   >  1:8921837/1‑94 (MQ=255)

                         gagaTGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATgg                                                                 >  1:3427692/1‑94 (MQ=255)

                            aTGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATggggg                                                              >  2:5637325/1‑94 (MQ=255)

                             tGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGt                                                             <  2:8720101/94‑1 (MQ=255)

                             tGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGt                                                             <  1:3690510/94‑1 (MQ=255)

                              gCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTg                                                            >  2:1820174/1‑94 (MQ=255)

                              gCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTg                                                            >  1:6241312/1‑94 (MQ=255)

                              gCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTg                                                            >  2:8278445/1‑94 (MQ=255)

                               cccTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGc                                                           >  2:3314571/1‑94 (MQ=255)

                               cccTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGc                                                           >  1:196897/1‑94 (MQ=255)

                                 cTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt                                                         <  2:3091908/94‑1 (MQ=255)

                                 cTTTCCAGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt                                                         >  1:2703206/1‑94 (MQ=255)

                                  tttCCGGCGGCAAAGGGCCTCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACTGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTg                                                        >  2:4732585/1‑94 (MQ=255)

                                  tttCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTg                                                        >  1:7347426/1‑94 (MQ=255)

                                  tttCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTg                                                        <  2:8499583/94‑1 (MQ=255)

                                  tttCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTg                                                        >  2:6576121/1‑94 (MQ=255)

                                   ttCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTgg                                                       >  2:2435702/1‑94 (MQ=255)

                                   ttCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTgg                                                       <  2:9269908/94‑1 (MQ=255)

                                      cggcggCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAAt                                                    <  2:671289/94‑1 (MQ=255)

                                      cggcggCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAAt                                                    <  1:2868330/94‑1 (MQ=255)

                                       ggcggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATg                                                   <  1:6054387/94‑1 (MQ=255)

                                        gcggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATgg                                                  <  2:7817007/94‑1 (MQ=255)

                                         cggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa                                                 <  2:10092589/94‑1 (MQ=255)

                                          ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGag                                                >  1:9103300/1‑93 (MQ=255)

                                          ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAc                                                >  1:262747/1‑94 (MQ=255)

                                           gcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACg                                               >  2:5380621/1‑94 (MQ=255)

                                           gcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACg                                               <  2:7377032/94‑1 (MQ=255)

                                           gcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACg                                               <  1:1421187/94‑1 (MQ=255)

                                            cAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGa                                              >  1:1762611/1‑94 (MQ=255)

                                             aaaGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGaa                                             <  1:5075920/94‑1 (MQ=255)

                                                 ggCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGtt                                         <  1:6102671/94‑1 (MQ=255)

                                                  gCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTc                                        <  1:7831292/94‑1 (MQ=255)

                                                  gCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTc                                        <  1:6636526/94‑1 (MQ=255)

                                                   catcatGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCa                                       <  1:5593846/94‑1 (MQ=255)

                                                   catcatGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCa                                       <  2:4088012/94‑1 (MQ=255)

                                                    atcatGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAg                                      >  1:3979176/1‑94 (MQ=255)

                                                    atcatGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAg                                      >  1:3737326/1‑94 (MQ=255)

                                                      catGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGcc                                    <  1:3071333/94‑1 (MQ=255)

                                                       atGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCg                                   >  2:7168058/1‑94 (MQ=255)

                                                         ggTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGCAAGCTCAGCCGta                                 >  1:1549872/1‑94 (MQ=255)

                                                          gTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGtat                                >  1:4445029/1‑94 (MQ=255)

                                                          gTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGtat                                >  1:9573806/1‑94 (MQ=255)

                                                          gTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGtat                                >  1:7170460/1‑94 (MQ=255)

                                                            aaaTCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAg                              >  1:7599140/1‑94 (MQ=255)

                                                             aaTCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAgg                             >  2:5066343/1‑94 (MQ=255)

                                                             aaTCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAgg                             >  1:9991847/1‑94 (MQ=255)

                                                             aaTCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAgg                             <  1:6565723/94‑1 (MQ=255)

                                                               tCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtt                           <  2:978623/94‑1 (MQ=255)

                                                                cAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGttt                          <  2:6330033/94‑1 (MQ=255)

                                                                 aGTTATAGCTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtttt                         >  1:4885887/1‑94 (MQ=255)

                                                                   ttATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtttttt                       >  2:2826958/1‑94 (MQ=255)

                                                                   ttATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtttttt                       <  1:4694317/94‑1 (MQ=255)

                                                                    tataGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTc                      <  1:1802720/94‑1 (MQ=255)

                                                                     ataGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCg                     >  2:8223904/1‑94 (MQ=255)

                                                                     ataGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCg                     >  2:3765620/1‑94 (MQ=255)

                                                                     ataGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCg                     <  2:8858291/94‑1 (MQ=255)

                                                                        gTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAg                  <  1:94124/94‑1 (MQ=255)

                                                                         ttAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGa                 >  1:4305110/1‑94 (MQ=255)

                                                                            aTCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCa              <  2:6481544/94‑1 (MQ=255)

                                                                             tCTTAAAACGCCCCGCTGTATAGAAGGGGACAACCTCGATGGGGGTGCCTGGACTGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAAACCaa             <  2:9357535/94‑1 (MQ=255)

                                                                               ttAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACa           <  2:7023363/94‑1 (MQ=255)

                                                                                 aaaaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATg         <  2:3363657/94‑1 (MQ=255)

                                                                                 aaaaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATg         >  1:7984071/1‑94 (MQ=255)

                                                                                  aaaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGt        >  2:7674849/1‑94 (MQ=255)

                                                                                  aaaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGt        >  2:10536841/1‑94 (MQ=255)

                                                                                   aaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTc       >  2:6227073/1‑94 (MQ=255)

                                                                                   aaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTc       >  2:5936265/1‑94 (MQ=255)

                                                                                   aaaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTc       <  2:5182770/94‑1 (MQ=255)

                                                                                    aaGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCa      >  1:3460993/1‑94 (MQ=255)

                                                                                     aGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAc     <  2:8373006/94‑1 (MQ=255)

                                                                                     aGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAc     >  2:3541481/1‑94 (MQ=255)

                                                                                      gCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACt    >  1:8777609/1‑94 (MQ=255)

                                                                                      acaccgcTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACt    <  1:8138713/93‑1 (MQ=255)

                                                                                       caccgcTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTg   >  1:8426254/1‑94 (MQ=255)

GGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGG  >  NC_000913/747081‑747262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTG  >  NC_000913/747079‑747264

AAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCG                                                                                              <  SRR4302545.974523/94‑1 (MQ=60)

AAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCG                                                                                              >  SRR4302545.4586452/1‑94 (MQ=60)

AAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCG                                                                                              >  SRR4302545.1790298/1‑94 (MQ=60)

 AGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGC                                                                                             >  SRR4302545.3266620/1‑94 (MQ=60)

 AGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGC                                                                                             >  SRR4302545.520110/1‑94 (MQ=60)

 AGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGC                                                                                             >  SRR4302545.7707319/1‑94 (MQ=60)

 AGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGC                                                                                             >  SRR4302545.804504/1‑94 (MQ=60)

  GGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCT                                                                                            <  SRR4302545.8785904/94‑1 (MQ=60)

   GGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTG                                                                                           >  SRR4302545.1995247/1‑94 (MQ=60)

    GGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGT                                                                                          <  SRR4302545.8596834/94‑1 (MQ=60)

    GGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGT                                                                                          <  SRR4302545.195342/94‑1 (MQ=60)

    GGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGT                                                                                          <  SRR4302545.6855999/94‑1 (MQ=60)

     GAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTA                                                                                         >  SRR4302545.6127837/1‑94 (MQ=60)

     GAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTA                                                                                         <  SRR4302545.3796779/94‑1 (MQ=60)

     GAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTA                                                                                         >  SRR4302545.3520674/1‑94 (MQ=60)

      AAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTAT                                                                                        >  SRR4302545.6979140/1‑94 (MQ=60)

        AATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCG                                                                                      <  SRR4302545.2806426/94‑1 (MQ=60)

         ATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGA                                                                                     <  SRR4302545.10328173/94‑1 (MQ=60)

         ATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTCAATCTTAAAAAGCACCGCTGTATCGA                                                                                     <  SRR4302545.6687406/94‑1 (MQ=60)

          TCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAA                                                                                    <  SRR4302545.5355233/94‑1 (MQ=60)

          TCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAA                                                                                    <  SRR4302545.5355234/94‑1 (MQ=60)

          TCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAA                                                                                    >  SRR4302545.5236736/1‑94 (MQ=60)

           CAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAG                                                                                   >  SRR4302545.1488580/1‑94 (MQ=60)

           CAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAG                                                                                   >  SRR4302545.7938804/1‑94 (MQ=60)

           CAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAG                                                                                   >  SRR4302545.7938803/1‑94 (MQ=60)

            AGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGG                                                                                  >  SRR4302545.10261205/1‑94 (MQ=60)

            AGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGG                                                                                  >  SRR4302545.1839781/1‑94 (MQ=60)

               AATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGC                                                                               <  SRR4302545.6130835/94‑1 (MQ=60)

                ATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAATAGCACCGCTGTATCGAAGGGGCC                                                                              >  SRR4302545.7455163/1‑94 (MQ=60)

                ATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCC                                                                              <  SRR4302545.1965585/94‑1 (MQ=60)

                ATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCC                                                                              <  SRR4302545.8742689/94‑1 (MQ=60)

                  TTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAG                                                                            <  SRR4302545.3911236/94‑1 (MQ=60)

                    TCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCC                                                                          >  SRR4302545.5119620/1‑94 (MQ=60)

                     CTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCT                                                                         <  SRR4302545.189921/94‑1 (MQ=60)

                     CTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCT                                                                         <  SRR4302545.7558180/94‑1 (MQ=60)

                     CTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCT                                                                         <  SRR4302545.10538082/94‑1 (MQ=60)

                      TGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTC                                                                        <  SRR4302545.10364764/94‑1 (MQ=60)

                      TGAAAGAGATGCCCTTTCCGGCGACAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCCCCGATGTATCGAAGGGGCCAGCCTC                                                                        <  SRR4302545.10915178/94‑1 (MQ=60)

                      TGAAAGAGATGCCCTGTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTC                                                                        <  SRR4302545.604081/94‑1 (MQ=60)

                        AAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGA                                                                      <  SRR4302545.6213755/94‑1 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     <  SRR4302545.3783649/94‑1 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     >  SRR4302545.9181204/1‑94 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     >  SRR4302545.5310947/1‑94 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     >  SRR4302545.8004410/1‑94 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     >  SRR4302545.5432145/1‑94 (MQ=60)

                         AAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGAT                                                                     >  SRR4302545.2511988/1‑94 (MQ=60)

                          AGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTACAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATG                                                                    <  SRR4302545.944089/94‑1 (MQ=60)

                          AGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATG                                                                    <  SRR4302545.944090/94‑1 (MQ=60)

                          AGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATG                                                                    <  SRR4302545.2404253/94‑1 (MQ=60)

                           GAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGG                                                                   >  SRR4302545.3511453/1‑94 (MQ=60)

                           GAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGG                                                                   <  SRR4302545.6984171/94‑1 (MQ=60)

                           GAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGG                                                                   <  SRR4302545.6751836/94‑1 (MQ=60)

                             GATGCCCTTTCCGGCGGCAAAGGGCATCTTGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCAAGCCTCGATGGGG                                                                 <  SRR4302545.9982333/94‑1 (MQ=60)

                             GATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGG                                                                 <  SRR4302545.2722109/94‑1 (MQ=60)

                             GATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGG                                                                 <  SRR4302545.8677868/94‑1 (MQ=60)

                             GATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGG                                                                 <  SRR4302545.7923981/94‑1 (MQ=60)

                              ATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGG                                                                >  SRR4302545.1852402/1‑94 (MQ=60)

                              ATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGG                                                                >  SRR4302545.3842461/1‑94 (MQ=60)

                              ATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGG                                                                >  SRR4302545.3842462/1‑94 (MQ=60)

                               TGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGT                                                               <  SRR4302545.3780835/94‑1 (MQ=60)

                                GCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTG                                                              >  SRR4302545.6411419/1‑94 (MQ=60)

                                 CCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGC                                                             >  SRR4302545.201021/1‑94 (MQ=60)

                                 CCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGC                                                             <  SRR4302545.8922740/94‑1 (MQ=60)

                                 CCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGC                                                             >  SRR4302545.3207004/1‑94 (MQ=60)

                                  CCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCC                                                            <  SRR4302545.972611/94‑1 (MQ=60)

                                   CTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCT                                                           <  SRR4302545.3528882/94‑1 (MQ=60)

                                   CTTTCCAGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCT                                                           >  SRR4302545.2768324/1‑94 (MQ=60)

                                    TTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTG                                                          >  SRR4302545.7553796/1‑94 (MQ=60)

                                    CTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTG                                                          <  SRR4302545.3356303/94‑1 (MQ=60)

                                     TTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGG                                                         <  SRR4302545.5813953/94‑1 (MQ=60)

                                     TTCCGGCGGCAAAGGACATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGG                                                         <  SRR4302545.1921866/94‑1 (MQ=60)

                                      TCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGA                                                        <  SRR4302545.169721/94‑1 (MQ=60)

                                      TCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGA                                                        >  SRR4302545.6231070/1‑94 (MQ=60)

                                       CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAA                                                       <  SRR4302545.4431375/94‑1 (MQ=60)

                                       CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAA                                                       <  SRR4302545.4431374/94‑1 (MQ=60)

                                        CGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAAT                                                      <  SRR4302545.3130330/94‑1 (MQ=60)

                                        CGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAAT                                                      <  SRR4302545.2937681/94‑1 (MQ=60)

                                        CCGCGGCAAAGGGCATCATGCTAAATCAGTTATAGTTAATCTTAAAAAGCACCGTTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAAT                                                      <  SRR4302545.6085056/94‑1 (MQ=60)

                                         GGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATG                                                     <  SRR4302545.6218501/94‑1 (MQ=60)

                                         GGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATG                                                     <  SRR4302545.6218503/94‑1 (MQ=60)

                                         GGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATG                                                     <  SRR4302545.9022282/94‑1 (MQ=60)

                                         GGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATG                                                     <  SRR4302545.6218502/94‑1 (MQ=60)

                                          GCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGG                                                    <  SRR4302545.1872028/94‑1 (MQ=60)

                                          GCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGG                                                    <  SRR4302545.278007/94‑1 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGGCTGGAATGGAC                                                  >  SRR4302545.4448631/1‑94 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAG                                                  >  SRR4302545.9370192/1‑94 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAC                                                  >  SRR4302545.3643339/1‑94 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAC                                                  >  SRR4302545.268170/1‑94 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAC                                                  <  SRR4302545.5854935/94‑1 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAC                                                  >  SRR4302545.5412666/1‑94 (MQ=60)

                                            GGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGAC                                                  >  SRR4302545.9370191/1‑94 (MQ=60)

                                             GCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACG                                                 <  SRR4302545.3068053/94‑1 (MQ=60)

                                             GCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACG                                                 <  SRR4302545.5069039/94‑1 (MQ=60)

                                             GCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACG                                                 >  SRR4302545.4363287/1‑94 (MQ=60)

                                             GCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACG                                                 <  SRR4302545.1453391/94‑1 (MQ=60)

                                             GCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACG                                                 <  SRR4302545.9346922/94‑1 (MQ=60)

                                              CAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGA                                                >  SRR4302545.1804817/1‑94 (MQ=60)

                                              CAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGA                                                >  SRR4302545.1804818/1‑94 (MQ=60)

                                              CAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGA                                                >  SRR4302545.519856/1‑94 (MQ=60)

                                              CAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGA                                                >  SRR4302545.4639230/1‑94 (MQ=60)

                                               AAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAA                                               <  SRR4302545.5205273/94‑1 (MQ=60)

                                               AAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAA                                               >  SRR4302545.1055766/1‑94 (MQ=60)

                                                  gggaataagGGTAAATCAGTTATAGTTAATCTTAAAAATCACCACTGTATCGAAGGGGCAAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGT                                            <  SRR4302545.7682222/85‑1 (MQ=60)

                                                  GGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGT                                            >  SRR4302545.899303/1‑94 (MQ=60)

                                                  GGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGT                                            <  SRR4302545.962536/94‑1 (MQ=60)

                                                  GGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGT                                            <  SRR4302545.6355489/94‑1 (MQ=60)

                                                   GGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTT                                           <  SRR4302545.4066379/94‑1 (MQ=60)

                                                   GGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTT                                           <  SRR4302545.6268501/94‑1 (MQ=60)

                                                   GGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTT                                           <  SRR4302545.6268504/94‑1 (MQ=60)

                                                   GGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTT                                           >  SRR4302545.6740637/1‑94 (MQ=60)

                                                    GCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTC                                          <  SRR4302545.6818433/94‑1 (MQ=60)

                                                    GCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTC                                          <  SRR4302545.4866500/94‑1 (MQ=60)

                                                    GCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTC                                          <  SRR4302545.8053236/94‑1 (MQ=60)

                                                    GCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGGTC                                          >  SRR4302545.5316200/1‑94 (MQ=60)

                                                     CATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCA                                         <  SRR4302545.5742164/94‑1 (MQ=60)

                                                      ATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAG                                        >  SRR4302545.3829266/1‑94 (MQ=60)

                                                      ATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAG                                        <  SRR4302545.2380658/94‑1 (MQ=60)

                                                      ATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAG                                        >  SRR4302545.4078713/1‑94 (MQ=60)

                                                        CATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCC                                      <  SRR4302545.3146665/94‑1 (MQ=60)

                                                        CATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCC                                      >  SRR4302545.2661605/1‑94 (MQ=60)

                                                        CATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCC                                      >  SRR4302545.1989156/1‑94 (MQ=60)

                                                          TGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGT                                    <  SRR4302545.2867182/94‑1 (MQ=60)

                                                           GGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGCAAGCTCAGCCGTA                                   >  SRR4302545.1586296/1‑94 (MQ=60)

                                                           GGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTA                                   <  SRR4302545.1822537/94‑1 (MQ=60)

                                                           GGTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTA                                   >  SRR4302545.5631492/1‑94 (MQ=60)

                                                            GTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTAT                                  >  SRR4302545.7369630/1‑94 (MQ=60)

                                                            GTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTAT                                  >  SRR4302545.4558255/1‑94 (MQ=60)

                                                            GTAAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTAT                                  >  SRR4302545.9856004/1‑94 (MQ=60)

                                                              AAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTGAGCCGTATAG                                >  SRR4302545.7814097/1‑94 (MQ=60)

                                                              AAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAG                                <  SRR4302545.8041240/94‑1 (MQ=60)

                                                              AAATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAG                                >  SRR4302545.7814099/1‑94 (MQ=60)

                                                              AAATCAGTTATAGTAAATCTAAAAAAGCCCCGATGTATCGAAGGGGCCAGCCGCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAG                                <  SRR4302545.8312272/94‑1 (MQ=60)

                                                               AATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGG                               >  SRR4302545.8508756/1‑94 (MQ=60)

                                                               AATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGG                               >  SRR4302545.10288116/1‑94 (MQ=60)

                                                               AATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGG                               <  SRR4302545.6745363/94‑1 (MQ=60)

                                                               AATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGG                               <  SRR4302545.676221/94‑1 (MQ=60)

                                                                ATCAGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCCGGAATGGACGAAAGTTCAGCCGTATAGGT                              <  SRR4302545.2592407/94‑1 (MQ=60)

                                                                  CGGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGCTCAGCCGTATAGGTTT                            >  SRR4302545.3544710/1‑94 (MQ=60)

                                                                   AGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTT                           >  SRR4302545.1474733/1‑94 (MQ=60)

                                                                   AGTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTT                           <  SRR4302545.9539407/94‑1 (MQ=60)

                                                                   AGTTATAGCTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTT                           >  SRR4302545.5010036/1‑94 (MQ=60)

                                                                   AGTTACAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTT                           >  SRR4302545.6996054/1‑94 (MQ=60)

                                                                    GTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTT                          <  SRR4302545.8809050/94‑1 (MQ=60)

                                                                    GTTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTT                          >  SRR4302545.4003666/1‑94 (MQ=60)

                                                                     TTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCGTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTT                         <  SRR4302545.478014/94‑1 (MQ=60)

                                                                     TTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTT                         >  SRR4302545.8107854/1‑94 (MQ=60)

                                                                     TTATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTT                         <  SRR4302545.4813936/94‑1 (MQ=60)

                                                                      TATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTC                        >  SRR4302545.3758712/1‑94 (MQ=60)

                                                                      TATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTC                        <  SRR4302545.1846311/94‑1 (MQ=60)

                                                                      TATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTC                        <  SRR4302545.2752118/94‑1 (MQ=60)

                                                                       ATAGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCG                       <  SRR4302545.5127463/94‑1 (MQ=60)

                                                                        TAGTTAATCTTAAAAAGCACCGCTGTATCGAAGAGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTTTAGGTTTTTTCCT                      >  SRR4302545.7918154/1‑94 (MQ=60)

                                                                         AGTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTA                     <  SRR4302545.9899747/94‑1 (MQ=60)

                                                                          GTTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAG                    <  SRR4302545.96298/94‑1 (MQ=60)

                                                                           TTAATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGA                   >  SRR4302545.4413518/1‑94 (MQ=60)

                                                                              ATCTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGGGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCA                >  SRR4302545.185239/1‑94 (MQ=60)

                                                                                CTTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAAC              <  SRR4302545.8189997/94‑1 (MQ=60)

                                                                                 TTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACA             >  SRR4302545.662720/1‑94 (MQ=60)

                                                                                 TTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACA             >  SRR4302545.8260829/1‑94 (MQ=60)

                                                                                 TTAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACA             >  SRR4302545.8260828/1‑94 (MQ=60)

                                                                                  TAAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACAT            >  SRR4302545.6076935/1‑94 (MQ=60)

                                                                                   AAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTTGTAGACCAACATG           >  SRR4302545.7462079/1‑94 (MQ=60)

                                                                                   AAAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATG           >  SRR4302545.8211129/1‑94 (MQ=60)

                                                                                    AAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGT          <  SRR4302545.238228/94‑1 (MQ=60)

                                                                                    AAAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGT          >  SRR4302545.4849558/1‑94 (MQ=60)

                                                                                     AAAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTC         <  SRR4302545.7037797/94‑1 (MQ=60)

                                                                                      AAGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCA        >  SRR4302545.3545716/1‑94 (MQ=60)

                                                                                       AGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAC       <  SRR4302545.1498054/94‑1 (MQ=60)

                                                                                       AGCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAC       >  SRR4302545.6900191/1‑94 (MQ=60)

                                                                                        GCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACT      <  SRR4302545.4228867/94‑1 (MQ=60)

                                                                                        GCACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACT      >  SRR4302545.9032331/1‑94 (MQ=60)

                                                                                        ACACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACT      <  SRR4302545.8373832/94‑1 (MQ=60)

                                                                                         CACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTG     >  SRR4302545.8669970/1‑94 (MQ=60)

                                                                                         CACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTG     >  SRR4302545.9619894/1‑94 (MQ=60)

                                                                                         CACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTG     <  SRR4302545.3855233/94‑1 (MQ=60)

                                                                                          ACCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGG    <  SRR4302545.9087044/94‑1 (MQ=60)

                                                                                           CCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGT   <  SRR4302545.8603767/94‑1 (MQ=60)

                                                                                           CCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGT   >  SRR4302545.1147209/1‑94 (MQ=60)

                                                                                           CCGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGT   <  SRR4302545.9042286/94‑1 (MQ=60)

                                                                                            CGCTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTG  >  SRR4302545.2315546/1‑94 (MQ=60)

AAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTG  >  NC_000913/747079‑747264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`