Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
782,054 |
T→C |
A249A (GCT→GCC) |
nadA → |
quinolinate synthetase A protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 782,054 | 0 | T | C | 99.5%
| 705.2
/ NA
| 203 | A249A (GCT→GCC) | nadA | quinolinate synthetase A protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (91/111); minor base G (1/0); total (92/111) |
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 234 total aligned reads displayed.
GGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTT > NC_000913/781964‑782143
|
ggATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCtgccgc < 2:3842447/93‑1 (MQ=255)
ggATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCtgccgc < 2:5850263/93‑1 (MQ=255)
tgctgcCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGaa > 2:2099449/1‑93 (MQ=255)
tgctgcCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGaa > 1:2281651/1‑93 (MQ=255)
tgctgcCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGGTCCTCCAGTCAACTGATCGCTGCCGCGaa > 1:1065447/1‑93 (MQ=255)
tgcCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAAc < 2:3054065/93‑1 (MQ=255)
gcCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACa < 2:1124629/93‑1 (MQ=255)
cATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACAtt < 2:3207614/93‑1 (MQ=255)
cATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACAtt < 2:5300614/93‑1 (MQ=255)
aTACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTg > 2:2348763/1‑93 (MQ=255)
tACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGc > 2:3261287/1‑93 (MQ=255)
tACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGc < 1:2704916/93‑1 (MQ=255)
cTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCca > 1:612038/1‑93 (MQ=255)
tGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCcac > 1:302804/1‑93 (MQ=255)
agTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGTTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCcaca < 1:2579483/92‑1 (MQ=255)
gTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACAt > 2:4227635/1‑93 (MQ=255)
tGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATc < 2:2928616/93‑1 (MQ=255)
cATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCag < 2:5751932/93‑1 (MQ=255)
cATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCag < 2:6462982/93‑1 (MQ=255)
cATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCag < 1:4254696/93‑1 (MQ=255)
tCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCagag > 2:4358330/1‑93 (MQ=255)
tCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGAGAAAAAATTGCCACATCagag > 1:5830215/1‑93 (MQ=255)
cAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGc < 1:3929514/93‑1 (MQ=255)
aTCACCACAAGCTATTATCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTAt < 1:4778755/93‑1 (MQ=255)
tCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCCGAGGCTTAtt > 1:1385377/1‑93 (MQ=255)
tCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGACACATCAGAGGCTTAtt > 1:1286743/1‑93 (MQ=255)
accacAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATtgt > 1:6388957/1‑93 (MQ=255)
accacAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATtgt > 2:1752144/1‑93 (MQ=255)
accacAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATAGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATtgt > 2:2286171/1‑93 (MQ=255)
cacaAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTgg > 1:134668/1‑93 (MQ=255)
acaAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGc < 1:5398717/93‑1 (MQ=255)
caAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCa < 2:2105837/93‑1 (MQ=255)
aGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAAc < 2:4510965/93‑1 (MQ=255)
tATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGa < 1:324476/93‑1 (MQ=255)
tATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGa < 1:440921/93‑1 (MQ=255)
aTTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGAt < 2:5887239/93‑1 (MQ=255)
ttGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATc < 1:4881145/93‑1 (MQ=255)
ttGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATc < 2:3987451/93‑1 (MQ=255)
tGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCg < 1:378459/93‑1 (MQ=255)
tGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCg < 2:3522387/93‑1 (MQ=255)
tCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCggg > 1:3821452/1‑93 (MQ=255)
gcGATAGGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCggg < 2:1689890/92‑1 (MQ=255)
cGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCgggg < 1:537061/93‑1 (MQ=255)
cGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCgggg < 1:6205463/93‑1 (MQ=255)
gATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGt > 1:148412/1‑93 (MQ=255)
atatGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCgggggt > 2:4955490/1‑91 (MQ=255)
atatGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCggggga > 2:1008220/1‑91 (MQ=255)
atatGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTa < 1:351663/93‑1 (MQ=255)
tatGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAt > 2:1278213/1‑93 (MQ=255)
tatGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAt > 1:2161634/1‑93 (MQ=255)
atGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAtt > 1:1001921/1‑93 (MQ=255)
tGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAttt < 2:1864631/93‑1 (MQ=255)
tGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAttt < 2:2219684/93‑1 (MQ=255)
cGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCt < 2:3902104/93‑1 (MQ=255)
ggATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTa > 2:6103989/1‑93 (MQ=255)
ggATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTa < 1:1742987/93‑1 (MQ=255)
gATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGACGACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAc < 1:3604101/93‑1 (MQ=255)
gATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAc > 1:2110741/1‑93 (MQ=255)
cggtcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACaaaa < 1:6108758/93‑1 (MQ=255)
cggtcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCAACaaaa < 2:5368610/93‑1 (MQ=255)
tatcggtGCCACCAGTCAACTGATTGCTGTCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAAt < 2:4852428/91‑1 (MQ=255)
gtcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATg > 1:2126239/1‑93 (MQ=255)
gtcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATg < 1:3387472/93‑1 (MQ=255)
gtcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATg < 2:5653930/93‑1 (MQ=255)
tcggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgc > 1:4857795/1‑93 (MQ=255)
ggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcag > 2:4899664/1‑93 (MQ=255)
ggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcag > 2:2510319/1‑93 (MQ=255)
ggtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcag < 2:1524338/93‑1 (MQ=255)
gtTCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcagc < 2:4988769/93‑1 (MQ=255)
ttCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcagca < 2:5179547/93‑1 (MQ=255)
ttCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATgcagca > 1:2051929/1‑93 (MQ=255)
tCCACCAGTCAACTGATCGCTGCCTCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGcagcag < 1:1179135/93‑1 (MQ=255)
tCCACCAGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCGACCGATCGGGGTATTTTCTACAAAATGcagcag < 2:562166/93‑1 (MQ=255)
ccaccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAgg < 1:771698/93‑1 (MQ=255)
ccaccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAgg < 2:3750132/93‑1 (MQ=255)
ccaccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAgg < 1:1248058/93‑1 (MQ=255)
ccaccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAgg > 2:75541/1‑93 (MQ=255)
caccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGc < 2:2621435/93‑1 (MQ=255)
caccaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGc > 1:1549154/1‑93 (MQ=255)
accaGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCg > 1:3093997/1‑93 (MQ=255)
caGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGt < 2:5384024/93‑1 (MQ=255)
caGTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGt < 1:1993716/93‑1 (MQ=255)
gTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGc > 2:801868/1‑93 (MQ=255)
gTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGc > 1:4484676/1‑93 (MQ=255)
gTCAACTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGc > 1:3674866/1‑93 (MQ=255)
aCTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGa > 2:2748421/1‑93 (MQ=255)
aCTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGa < 2:343056/93‑1 (MQ=255)
cTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGAt < 1:5502849/93‑1 (MQ=255)
cTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGAt > 2:6218450/1‑93 (MQ=255)
cTGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGAt < 1:606041/93‑1 (MQ=255)
tGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATa < 2:2773673/93‑1 (MQ=255)
tGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATa > 1:6449017/1‑93 (MQ=255)
tGATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATa > 1:81519/1‑93 (MQ=255)
gATCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATaa < 2:5024204/93‑1 (MQ=255)
aTCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATaaa > 1:3319360/1‑93 (MQ=255)
aTCGCTGCCGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATaaa > 2:4677281/1‑93 (MQ=255)
gctgccGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAagag < 1:5234425/93‑1 (MQ=255)
ctgccgCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGt > 1:2784742/1‑93 (MQ=255)
tgccgcGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGtt > 1:5640745/1‑93 (MQ=255)
tgccgcGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGtt > 2:6256882/1‑93 (MQ=255)
|
GGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTT > NC_000913/781964‑782143
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTACTG > NC_000913/781961‑782147
|
CCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCC < SRR4302537.546659/94‑1 (MQ=60)
CCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGCCAACTGGTCGCTGCC > SRR4302537.6384970/1‑94 (MQ=60)
CCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCG > SRR4302537.6214959/1‑94 (MQ=60)
CCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCG > SRR4302537.2523447/1‑94 (MQ=60)
ATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCT‑AA > SRR4302537.4775327/1‑94 (MQ=60)
ATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AA > SRR4302537.2297753/1‑94 (MQ=60)
ATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGGTCCTCCAGTCAACTGATCGCTGCCGCG‑AA > SRR4302537.1072785/1‑94 (MQ=60)
GCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCCGGTACAGCCGTCAACTGATCGCTGCCGCG‑AAAA > SRR4302537.3091576/1‑94 (MQ=60)
CTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCCGTCAACTGATCGCTGCCGCG‑AAAAC > SRR4302537.5420834/1‑94 (MQ=60)
CTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCGCAAAA > SRR4302537.3688943/1‑94 (MQ=60)
CTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAAC > SRR4302537.203413/1‑94 (MQ=60)
TGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGCTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACA > SRR4302537.1528499/1‑94 (MQ=60)
CCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATT < SRR4302537.2069980/94‑1 (MQ=60)
ATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTTATTGCTGCCCCG‑AAAACATTCC > SRR4302537.5352292/1‑94 (MQ=60)
TACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCC < SRR4302537.2723798/94‑1 (MQ=60)
ACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCA > SRR4302537.616217/1‑94 (MQ=60)
CTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCAC > SRR4302537.304912/1‑94 (MQ=60)
AGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGTTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACAT < SRR4302537.2597540/94‑1 (MQ=60)
GCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGGTCGCTGCCGCG‑AAAACATTGCCACATCAG < SRR4302537.3789649/94‑1 (MQ=60)
CATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGA < SRR4302537.3326816/94‑1 (MQ=60)
CATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGA < SRR4302537.4284269/94‑1 (MQ=60)
ATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGAG‑AAAAAATTGCCACATCAGAG > SRR4302537.5870177/1‑94 (MQ=60)
TCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGG > SRR4302537.5553352/1‑94 (MQ=60)
TCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGG < SRR4302537.1236172/94‑1 (MQ=60)
TCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGG < SRR4302537.4284865/94‑1 (MQ=60)
CAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCT < SRR4302537.3956970/94‑1 (MQ=60)
AGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCACTGCCGCG‑AAAACATTGCCACATCAGAGGCTT < SRR4302537.787913/94‑1 (MQ=60)
AATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTAT < SRR4302537.4895448/94‑1 (MQ=60)
ATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCCGAGGCTTATT > SRR4302537.1395041/1‑94 (MQ=60)
ATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATT < SRR4302537.3847556/94‑1 (MQ=60)
ATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGACACATCAGAGGCTTATT > SRR4302537.1295693/1‑94 (MQ=60)
ATCACCACAAGCTATTATCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATT < SRR4302537.4811747/94‑1 (MQ=60)
TCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTG < SRR4302537.4159260/94‑1 (MQ=60)
CACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGT > SRR4302537.6432492/1‑94 (MQ=60)
CACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGT < SRR4302537.1276225/94‑1 (MQ=60)
ACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTG < SRR4302537.3849984/94‑1 (MQ=60)
ACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTG > SRR4302537.3391519/1‑94 (MQ=60)
CCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGG > SRR4302537.135622/1‑94 (MQ=60)
ACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCA < SRR4302537.5435569/94‑1 (MQ=60)
ACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCA < SRR4302537.1080324/94‑1 (MQ=60)
AAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAAC > SRR4302537.5456682/1‑94 (MQ=60)
AGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACC < SRR4302537.1656280/94‑1 (MQ=60)
AGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACC < SRR4302537.3503126/94‑1 (MQ=60)
AGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACC < SRR4302537.1910437/94‑1 (MQ=60)
AGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACC < SRR4302537.4878353/94‑1 (MQ=60)
GCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCG < SRR4302537.213619/94‑1 (MQ=60)
TATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGAT < SRR4302537.326726/94‑1 (MQ=60)
TATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGAT < SRR4302537.443981/94‑1 (MQ=60)
ATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATC < SRR4302537.3456388/94‑1 (MQ=60)
ATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATC > SRR4302537.956181/1‑94 (MQ=60)
TTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCG < SRR4302537.4914864/94‑1 (MQ=60)
TGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGG < SRR4302537.381085/94‑1 (MQ=60)
GTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGG > SRR4302537.3848246/1‑94 (MQ=60)
GTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGG < SRR4302537.6161400/94‑1 (MQ=60)
TCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGG < SRR4302537.226478/94‑1 (MQ=60)
CGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGT > SRR4302537.2152313/1‑94 (MQ=60)
CGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGT < SRR4302537.6248227/94‑1 (MQ=60)
CGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGT < SRR4302537.130929/94‑1 (MQ=60)
CGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGT < SRR4302537.540747/94‑1 (MQ=60)
CGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGT > SRR4302537.149472/1‑94 (MQ=60)
GATATTGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTA < SRR4302537.2791571/94‑1 (MQ=60)
ATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAT > SRR4302537.2176871/1‑94 (MQ=60)
ATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTAT < SRR4302537.354107/94‑1 (MQ=60)
TATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATT > SRR4302537.1008833/1‑94 (MQ=60)
ATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGTCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTT > SRR4302537.44549/1‑94 (MQ=60)
ATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTT > SRR4302537.6143958/1‑94 (MQ=60)
TGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTT > SRR4302537.1220174/1‑94 (MQ=60)
GCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGGATTTTCT > SRR4302537.424113/1‑94 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC < SRR4302537.1492532/94‑1 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC < SRR4302537.5443553/94‑1 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC < SRR4302537.1755138/94‑1 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC > SRR4302537.578871/1‑94 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC < SRR4302537.6478571/94‑1 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC > SRR4302537.2125620/1‑94 (MQ=60)
GGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTAC > SRR4302537.2205072/1‑94 (MQ=60)
GATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑ACGACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACA < SRR4302537.3629501/94‑1 (MQ=60)
GATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACA > SRR4302537.5974129/1‑94 (MQ=60)
ATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAA < SRR4302537.2715218/94‑1 (MQ=60)
GCGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAA > SRR4302537.690569/1‑94 (MQ=60)
CGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAAT < SRR4302537.6150737/94‑1 (MQ=60)
CGGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTCCTACAAAAT < SRR4302537.908388/94‑1 (MQ=60)
GGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATG > SRR4302537.2141196/1‑94 (MQ=60)
GGTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATG > SRR4302537.697980/1‑94 (MQ=60)
GTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGC < SRR4302537.3411468/94‑1 (MQ=60)
GTCGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGC > SRR4302537.4891313/1‑94 (MQ=60)
CGGTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAG < SRR4302537.5120156/94‑1 (MQ=60)
GTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCA > SRR4302537.2066322/1‑94 (MQ=60)
GTTCCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCA > SRR4302537.6209513/1‑94 (MQ=60)
TCCACCAGTCAACTGATCGCTGCCTCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGG < SRR4302537.1187344/94‑1 (MQ=60)
CCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGC > SRR4302537.1559964/1‑94 (MQ=60)
CCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGC < SRR4302537.6166700/94‑1 (MQ=60)
CCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGC < SRR4302537.1256751/94‑1 (MQ=60)
CCACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGC < SRR4302537.776989/94‑1 (MQ=60)
CACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCG > SRR4302537.3115581/1‑94 (MQ=60)
CACCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCG > SRR4302537.136822/1‑94 (MQ=60)
CCAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGT < SRR4302537.6292012/94‑1 (MQ=60)
CAGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTG < SRR4302537.2007579/94‑1 (MQ=60)
AGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGC > SRR4302537.3700714/1‑94 (MQ=60)
AGTCAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGC > SRR4302537.4515700/1‑94 (MQ=60)
TCAACTGATCGCTCCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCA < SRR4302537.3713535/94‑1 (MQ=60)
CAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAG > SRR4302537.5882707/1‑94 (MQ=60)
CAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAG < SRR4302537.2777053/94‑1 (MQ=60)
CAACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAG < SRR4302537.3601478/94‑1 (MQ=60)
ACTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGAT > SRR4302537.3229645/1‑94 (MQ=60)
CTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATA > SRR4302537.82119/1‑94 (MQ=60)
CTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATA < SRR4302537.610183/94‑1 (MQ=60)
CTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATA < SRR4302537.5540424/94‑1 (MQ=60)
CTGATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATA > SRR4302537.6492756/1‑94 (MQ=60)
GATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAA < SRR4302537.2114254/94‑1 (MQ=60)
GATCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAA > SRR4302537.3342838/1‑94 (MQ=60)
TCGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGA > SRR4302537.1052156/1‑94 (MQ=60)
CGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAG < SRR4302537.1586646/94‑1 (MQ=60)
CGCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGGATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAG > SRR4302537.3134583/1‑94 (MQ=60)
GCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGT > SRR4302537.2804207/1‑94 (MQ=60)
GCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGT < SRR4302537.4610357/94‑1 (MQ=60)
GCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGT < SRR4302537.5112241/94‑1 (MQ=60)
GCTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGT < SRR4302537.5270433/94‑1 (MQ=60)
GCTGCCGCG‑AAAACATTGCAACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGT < SRR4302537.13784/94‑1 (MQ=60)
CTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTT > SRR4302537.2900105/1‑94 (MQ=60)
CTGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTT > SRR4302537.5679347/1‑94 (MQ=60)
TGCCGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTA < SRR4302537.2330940/94‑1 (MQ=60)
CGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTACTG > SRR4302537.5993178/1‑94 (MQ=60)
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CCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCG‑AAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTACTG > NC_000913/781961‑782147
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
