Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
826,729 |
G→A |
D492D (GAC→GAT) |
ybhF ← |
YbhF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 826,729 | 0 | G | A | 94.7%
| 442.2
/ ‑0.4
| 151 | D492D (GAC→GAT) | ybhF | YbhF |
| Reads supporting (aligned to +/- strand): ref base G (6/2); new base A (54/89); total (60/91) |
| Fisher's exact test for biased strand distribution p-value = 5.90e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 |
Only 100 of 191 total aligned reads displayed.
TTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT > NC_000913/826639‑826819
|
ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGTc > 1:395270/1‑93 (MQ=255)
ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATc < 2:2753440/93‑1 (MQ=255)
ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGATc > 1:2233528/1‑93 (MQ=255)
ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATACACGGCGGGTGAGGGGATc < 2:6297734/93‑1 (MQ=255)
tCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCa > 1:2825138/1‑93 (MQ=255)
cATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCaa < 1:2231974/93‑1 (MQ=255)
aTCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAAc > 1:4811279/1‑93 (MQ=255)
ccATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGc < 1:4528736/93‑1 (MQ=255)
aTAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCg > 1:6463673/1‑93 (MQ=255)
aTAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCg < 1:4254972/93‑1 (MQ=255)
aTAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCg > 1:5707759/1‑93 (MQ=255)
tAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCgg > 1:5304426/1‑93 (MQ=255)
tgggtggTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTc < 1:499531/93‑1 (MQ=255)
tgggtggTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTc < 1:254977/93‑1 (MQ=255)
tgggtggTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTc < 2:1085435/93‑1 (MQ=255)
gggtggTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCg > 1:5403256/1‑93 (MQ=255)
ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCgg < 2:1266426/93‑1 (MQ=255)
ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCgg < 1:3073909/93‑1 (MQ=255)
tggtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGtt < 1:3744438/93‑1 (MQ=255)
tggtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGtt < 2:1654090/93‑1 (MQ=255)
ggtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTtc < 1:3653210/93‑1 (MQ=255)
gtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGGAGTCGGGtcg > 1:322809/1‑93 (MQ=255)
gtgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTtcg < 1:3579266/93‑1 (MQ=255)
tgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTtcgt > 1:574602/1‑93 (MQ=255)
tgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTtcgt > 1:2301932/1‑93 (MQ=255)
ccATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGAAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTtcgtcgg > 1:1021078/1‑92 (MQ=255)
aTCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCgaga < 2:5772012/93‑1 (MQ=255)
tCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGaa > 1:378801/1‑93 (MQ=255)
tCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGaa > 1:6272044/1‑93 (MQ=255)
cACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGaaa < 2:4423040/93‑1 (MQ=255)
ccGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACa < 1:5405108/93‑1 (MQ=255)
ccGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACa < 2:1065578/93‑1 (MQ=255)
ccGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGGCCGTTTGGCTAGAAACa > 2:4793147/1‑93 (MQ=255)
ccGTGACGCATTTCTCTACAATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACa < 2:5753121/93‑1 (MQ=255)
cGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAg > 2:4108090/1‑93 (MQ=255)
tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGaa < 1:5760141/93‑1 (MQ=255)
tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGaa < 1:5709413/93‑1 (MQ=255)
tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTAGGTTCGTCGAGAAACAGaa > 1:6031493/1‑93 (MQ=255)
gCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTc < 2:6473857/93‑1 (MQ=255)
ccTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGGAACAGAATGTcc > 2:6168966/1‑93 (MQ=255)
ccTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTcc < 1:104174/93‑1 (MQ=255)
tttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCgg > 2:3858825/1‑93 (MQ=255)
tttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCgg > 1:2132719/1‑93 (MQ=255)
ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGt < 1:2386784/93‑1 (MQ=255)
ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGt > 1:4523023/1‑93 (MQ=255)
ctctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGTCAACGCCGGAAGTCGGTTCCTCGAGAAACAGAATTGCCGGTTc > 2:2867607/1‑93 (MQ=255)
tctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCa > 1:1527033/1‑93 (MQ=255)
tctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCa < 2:5476239/93‑1 (MQ=255)
tctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCa > 1:807376/1‑93 (MQ=255)
ctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCAt < 1:3824392/93‑1 (MQ=255)
cccATGCTTGTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCTGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGc < 2:4312221/92‑1 (MQ=255)
aCCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGc > 2:2403800/1‑93 (MQ=255)
aCCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGc > 1:707361/1‑93 (MQ=255)
ccATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCa < 1:6396857/93‑1 (MQ=255)
ccATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCa < 2:2209825/93‑1 (MQ=255)
ccATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCa < 2:2730600/93‑1 (MQ=255)
ccATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCa > 2:5954221/1‑93 (MQ=255)
cATGCTGTGGATGTGGAGCCAAACTTCACGGCGGGTGAGGGGATCAGCGCGGAAAGTCGGTTGGTCGAGAAACAGAATGTCCGGTCAATGCAt < 2:2023178/93‑1 (MQ=255)
aTGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATc > 2:4562335/1‑93 (MQ=255)
aTGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATc > 2:5093802/1‑93 (MQ=255)
aTGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAAAGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGGTCATGCATc > 2:1867617/1‑93 (MQ=255)
tGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGGTCATGCATCa > 1:2874592/1‑93 (MQ=255)
gCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAg < 1:3516460/93‑1 (MQ=255)
cTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGc > 2:3024963/1‑93 (MQ=255)
gTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGa > 2:4379514/1‑93 (MQ=255)
ttGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGaa < 2:2132719/93‑1 (MQ=255)
ttGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGaa < 1:3858825/93‑1 (MQ=255)
tGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAAc < 1:4328414/93‑1 (MQ=255)
tGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAAc < 1:2098081/93‑1 (MQ=255)
gATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACCCCGGAAGGCGGTTCGTCGAGAAACAGAAAGTCCGGTTCATGCATCAGCGcaca > 2:3704787/1‑93 (MQ=255)
gATGTGCAGCCAAAAGTCACGGCGTGTGAGGGTATGAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACa < 2:95875/93‑1 (MQ=255)
tgtgCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAgg > 1:1505865/1‑93 (MQ=255)
tgtgCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAgg > 2:3410471/1‑93 (MQ=255)
tgtgCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAgg < 1:1716501/93‑1 (MQ=255)
gtgCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgc > 1:6176085/1‑93 (MQ=255)
cAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCAGTTCATGCATCAGCGAACAGgccag < 1:1223302/93‑1 (MQ=255)
aGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgccagc > 1:462505/1‑93 (MQ=255)
gCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGGTCATGCATCAGAGGACAGgccagcg > 2:4096289/1‑93 (MQ=255)
ccAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgccagcgc > 1:1885621/1‑93 (MQ=255)
cAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgccagcgcc > 2:5148911/1‑93 (MQ=255)
aaaaTTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGGAACAGAATGGCCGGTTCATGCATCAGCGAACAGgccagcgcac > 1:4080189/1‑91 (MQ=255)
aaTTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGgccagcgccagc < 2:2528892/93‑1 (MQ=255)
aTTCACGGCGGGTGAGGGGATGAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGcc < 1:4851485/93‑1 (MQ=255)
aTTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCCGTTCGTCGAGAAACAGAATGTCCGGGTCATGCATCAGCGAACAAGCCAGCGCCAGcc > 2:4784903/1‑93 (MQ=255)
tCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGc < 1:3471662/93‑1 (MQ=255)
tCACGGCGGGTGAGGGGATCAACGCCGGAAGTCCGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAACGCCAGCCGc > 2:6133694/1‑93 (MQ=255)
cggGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTa < 2:3571154/93‑1 (MQ=255)
gggTGAGGGGATCAACGCGGAAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTaa < 1:1484414/93‑1 (MQ=255)
gggTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGATAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTaa < 2:5334732/93‑1 (MQ=255)
gggTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTaa > 2:5627797/1‑93 (MQ=255)
gTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTaaaa < 2:4842665/93‑1 (MQ=255)
tGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAAc < 2:5611550/93‑1 (MQ=255)
tGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAAc > 2:5831299/1‑93 (MQ=255)
tGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAAc > 1:5664074/1‑93 (MQ=255)
gAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAAcc < 1:4662928/93‑1 (MQ=255)
ggggaTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTa > 2:1521126/1‑93 (MQ=255)
gggaTCAACGCCGGAAGTCGTTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTaa < 2:60649/93‑1 (MQ=255)
gggaTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTaa < 1:1611105/93‑1 (MQ=255)
gggaTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTaa < 1:3143041/93‑1 (MQ=255)
gggaTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTaa < 2:4567368/93‑1 (MQ=255)
|
TTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT > NC_000913/826639‑826819
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAATGGC > NC_000913/826637‑826822
|
GCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGAT < SRR4302537.2534518/94‑1 (MQ=60)
GCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGAT < SRR4302537.117686/94‑1 (MQ=60)
CTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGTC > SRR4302537.398009/1‑94 (MQ=60)
CTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATC > SRR4302537.3514077/1‑94 (MQ=60)
CTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATC < SRR4302537.4499155/94‑1 (MQ=60)
TTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCA < SRR4302537.6462284/94‑1 (MQ=60)
TTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCA > SRR4302537.2844887/1‑94 (MQ=60)
TATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAAC < SRR4302537.2532957/94‑1 (MQ=60)
CATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAAC > SRR4302537.4844490/1‑94 (MQ=60)
CATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAAC < SRR4302537.2247719/94‑1 (MQ=60)
CCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCC < SRR4302537.4560094/94‑1 (MQ=60)
CATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCG > SRR4302537.3638384/1‑94 (MQ=60)
CATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCG > SRR4302537.6507462/1‑94 (MQ=60)
CATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCG > SRR4302537.5746819/1‑94 (MQ=60)
ATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGG > SRR4302537.5340885/1‑94 (MQ=60)
ATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGG < SRR4302537.4284548/94‑1 (MQ=60)
TAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGTCAACACCGGA > SRR4302537.1895697/1‑94 (MQ=60)
AAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAA < SRR4302537.3827665/94‑1 (MQ=60)
GTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTC > SRR4302537.6005601/1‑94 (MQ=60)
TGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCG > SRR4302537.3869402/1‑94 (MQ=60)
TGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCG < SRR4302537.256786/94‑1 (MQ=60)
TGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCG < SRR4302537.2979398/94‑1 (MQ=60)
TGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCG > SRR4302537.5440126/1‑94 (MQ=60)
TGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCG < SRR4302537.502964/94‑1 (MQ=60)
GGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGG > SRR4302537.4590317/1‑94 (MQ=60)
GGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGT > SRR4302537.3768735/1‑94 (MQ=60)
GGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGT < SRR4302537.3095328/94‑1 (MQ=60)
GTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTT < SRR4302537.4685210/94‑1 (MQ=60)
TGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTC < SRR4302537.3770731/94‑1 (MQ=60)
TGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTC < SRR4302537.1508703/94‑1 (MQ=60)
GGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCG < SRR4302537.3678921/94‑1 (MQ=60)
GGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGGAGTCGGGTCG > SRR4302537.325049/1‑94 (MQ=60)
GGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCG < SRR4302537.2857660/94‑1 (MQ=60)
GTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGT > SRR4302537.578545/1‑94 (MQ=60)
GTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGT < SRR4302537.3604497/94‑1 (MQ=60)
GTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGT > SRR4302537.2318183/1‑94 (MQ=60)
TGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTC < SRR4302537.1687356/94‑1 (MQ=60)
TGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTC > SRR4302537.4962380/1‑94 (MQ=60)
GACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCACAATTCACGGCGGGTGAGGGGGTCAAATCCCGAAGTCGGGTCGTCG > SRR4302537.6076362/1‑94 (MQ=60)
ACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGAAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGG > SRR4302537.1028113/1‑94 (MQ=60)
ATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAA > SRR4302537.381428/1‑94 (MQ=60)
ATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGTCAACGCCGGAAGTCGGTTCGTCCAGAA > SRR4302537.2139380/1‑94 (MQ=60)
ATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAA > SRR4302537.6315087/1‑94 (MQ=60)
CCCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACA < SRR4302537.1298921/94‑1 (MQ=60)
ACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACA < SRR4302537.1544649/94‑1 (MQ=60)
CCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAG < SRR4302537.5441983/94‑1 (MQ=60)
CGTGACGCCTTTCTCTCCCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGA < SRR4302537.5366359/94‑1 (MQ=60)
GTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTAGGTTCGTCGAGAAACAGAA > SRR4302537.6072935/1‑94 (MQ=60)
GTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATAAAAGCCGGAAGTCGGGTCGTCGAGAAAAAGAA > SRR4302537.681787/1‑94 (MQ=60)
TGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAAT < SRR4302537.5748481/94‑1 (MQ=60)
TGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAAT < SRR4302537.5799594/94‑1 (MQ=60)
ACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGT < SRR4302537.5440232/94‑1 (MQ=60)
ACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGT > SRR4302537.5787620/1‑94 (MQ=60)
GCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCC < SRR4302537.1102748/94‑1 (MQ=60)
CCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCG < SRR4302537.104925/94‑1 (MQ=60)
CTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGG > SRR4302537.2147730/1‑94 (MQ=60)
TTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGT < SRR4302537.5706554/94‑1 (MQ=60)
TTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGT < SRR4302537.2264341/94‑1 (MQ=60)
TTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGT < SRR4302537.799573/94‑1 (MQ=60)
TTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGT > SRR4302537.4554317/1‑94 (MQ=60)
TTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTT < SRR4302537.529949/94‑1 (MQ=60)
TTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTT < SRR4302537.2403596/94‑1 (MQ=60)
CTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCA > SRR4302537.4876089/1‑94 (MQ=60)
CTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCA > SRR4302537.2693189/1‑94 (MQ=60)
CTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCA > SRR4302537.1537701/1‑94 (MQ=60)
CTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCA > SRR4302537.812917/1‑94 (MQ=60)
CTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATG < SRR4302537.5774559/94‑1 (MQ=60)
CTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATG < SRR4302537.3851203/94‑1 (MQ=60)
TACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGC > SRR4302537.712201/1‑94 (MQ=60)
ACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCA > SRR4302537.6337681/1‑94 (MQ=60)
CCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCAT < SRR4302537.6440415/94‑1 (MQ=60)
CCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCAT < SRR4302537.4836288/94‑1 (MQ=60)
CCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGGTCATGCAT > SRR4302537.631088/1‑94 (MQ=60)
ATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGGTCATGCATCA > SRR4302537.2894766/1‑94 (MQ=60)
GCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGC < SRR4302537.3541338/94‑1 (MQ=60)
GCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGCTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGC < SRR4302537.4265515/94‑1 (MQ=60)
CTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCG > SRR4302537.1907681/1‑94 (MQ=60)
CTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCG > SRR4302537.3113299/1‑94 (MQ=60)
TGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATCTCCGGTTCATGCATCAGCGA > SRR4302537.4331888/1‑94 (MQ=60)
TTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAAC < SRR4302537.3885840/94‑1 (MQ=60)
TTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAAC < SRR4302537.3194879/94‑1 (MQ=60)
TGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACA < SRR4302537.2112879/94‑1 (MQ=60)
TGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACA < SRR4302537.4358494/94‑1 (MQ=60)
GATGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCTGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAG < SRR4302537.3492828/94‑1 (MQ=60)
ATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGG > SRR4302537.1516370/1‑94 (MQ=60)
TGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGC < SRR4302537.1728482/94‑1 (MQ=60)
TGTGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGC > SRR4302537.6218622/1‑94 (MQ=60)
TGCAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGGTCGTCGAGAAACAGAATGTCCGGTTCATGCATCATCGAACAGGACA > SRR4302537.3933106/1‑94 (MQ=60)
CAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGC > SRR4302537.465688/1‑94 (MQ=60)
CAGCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCAGTTCATGCATCAGCGAACAGGCCAGC < SRR4302537.1231805/94‑1 (MQ=60)
GCCAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGC > SRR4302537.1898733/1‑94 (MQ=60)
CAAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGGAACAGAATGGCCGGTTCATGCATCAGCGAACAGGCCAGCGCac > SRR4302537.4108672/1‑92 (MQ=60)
AAAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAG < SRR4302537.4517778/94‑1 (MQ=60)
AAATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGC < SRR4302537.5607746/94‑1 (MQ=60)
AATTCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCC > SRR4302537.865135/1‑94 (MQ=60)
ATTCACGGCGGGTGAGGGGATGAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCG < SRR4302537.4884953/94‑1 (MQ=60)
TCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCT < SRR4302537.4105447/94‑1 (MQ=60)
TCACGGCGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCT < SRR4302537.3496226/94‑1 (MQ=60)
CGGGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAA < SRR4302537.2326953/94‑1 (MQ=60)
GGGTGAGGGGATCAACGCGGAAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAA < SRR4302537.1494744/94‑1 (MQ=60)
GGTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAA < SRR4302537.151717/94‑1 (MQ=60)
GTGAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAAC > SRR4302537.5702829/1‑94 (MQ=60)
GAGGGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCT < SRR4302537.4695154/94‑1 (MQ=60)
GGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTTCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT > SRR4302537.4473470/1‑94 (MQ=60)
GGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT < SRR4302537.3165100/94‑1 (MQ=60)
GGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT < SRR4302537.1622365/94‑1 (MQ=60)
GGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT < SRR4302537.3786041/94‑1 (MQ=60)
GGGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAAT > SRR4302537.4943517/1‑94 (MQ=60)
GGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAATG < SRR4302537.838221/94‑1 (MQ=60)
GGATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAATG < SRR4302537.4745612/94‑1 (MQ=60)
ATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAATGGC < SRR4302537.1001090/94‑1 (MQ=60)
ATCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGAGCCAGCCGCTGTTTAAAACCTAATGGC > SRR4302537.3450745/1‑94 (MQ=60)
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GCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCAGCGAACAGGCCAGCGCCAGCCGCTGTTTAAAACCTAATGGC > NC_000913/826637‑826822
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
