Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
842,873 |
A→G |
W611R (TGG→CGG) |
ybiO ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 842,873 | 0 | A | G | 99.5%
| 660.7
/ ‑5.9
| 192 | W611R (TGG→CGG) | ybiO | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (104/87); minor base C (0/1); total (104/88) |
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 201 total aligned reads displayed.
ATCAGCATCTTCATGGCGATCAACATCATAATTTGCCA‑CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATA > NC_000913/842784‑842961
|
tCAGCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCgg > 2:2937864/1‑93 (MQ=255)
cAGCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGa < 2:2230007/93‑1 (MQ=255)
aGCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGaa < 1:5342834/93‑1 (MQ=255)
aGCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGaa < 2:1741544/93‑1 (MQ=255)
aGCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGAGGTTATCGAAGACCGCGGaa > 2:5399950/1‑93 (MQ=255)
gCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAat < 1:1448048/93‑1 (MQ=255)
gCATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAat > 1:5938338/1‑93 (MQ=255)
cATCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatg > 1:1667953/1‑93 (MQ=255)
aTCTTCGTGGCGATCAACATCATAATTTGCCACCCACCGAACCAACGCCGCGAACAAAGTTAGCAAAGGTGGTTAGCGAAGGCCGCGGAatga < 2:2513538/93‑1 (MQ=255)
aTCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatga < 2:1871717/93‑1 (MQ=255)
tCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatgat > 1:2440672/1‑93 (MQ=255)
tCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatgat > 1:5689837/1‑93 (MQ=255)
tCTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatgat > 2:2851330/1‑93 (MQ=255)
cTTCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAatgatg < 1:5627093/93‑1 (MQ=255)
tCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGAtgtg > 2:165165/1‑93 (MQ=255)
tCATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGAtgtg > 1:4601298/1‑93 (MQ=255)
cATGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGa > 2:1267637/1‑93 (MQ=255)
aTGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGAt < 1:3797103/93‑1 (MQ=255)
tgccGATCATCATCATAATTGGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATa < 1:3755109/90‑1 (MQ=255)
tGGCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATa > 2:3589714/1‑93 (MQ=255)
ggCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATAc < 1:605578/93‑1 (MQ=255)
ggCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATAc < 1:3330165/93‑1 (MQ=255)
ggCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATAc < 2:3774200/93‑1 (MQ=255)
gCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACg < 2:2673282/93‑1 (MQ=255)
gCGATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACg < 1:5133145/93‑1 (MQ=255)
gATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGcc > 2:5360096/1‑93 (MQ=255)
gATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGcc < 1:4089430/93‑1 (MQ=255)
gATCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGcc < 2:676608/93‑1 (MQ=255)
aTCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGccc < 2:4399940/93‑1 (MQ=255)
tCAACATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGcccc > 2:1070905/1‑93 (MQ=255)
aCATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGt > 2:1169776/1‑93 (MQ=255)
aCATCATAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGt < 1:4281634/93‑1 (MQ=255)
catcatAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTa < 1:4451032/93‑1 (MQ=255)
catcatAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTa > 2:3727224/1‑93 (MQ=255)
catcatAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTa > 1:5207849/1‑93 (MQ=255)
atcatAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTAt > 1:1742904/1‑93 (MQ=255)
tcatAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATc < 2:2120149/93‑1 (MQ=255)
catAACTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATcc < 1:6336258/93‑1 (MQ=255)
tAATTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTg > 2:5638086/1‑93 (MQ=255)
aaTTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGt < 2:2006821/93‑1 (MQ=255)
aaTTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGt < 1:107424/93‑1 (MQ=255)
aaTTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGt < 1:1273928/93‑1 (MQ=255)
aTTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTc > 2:3312889/1‑93 (MQ=255)
aTTTGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTc > 2:6032007/1‑93 (MQ=255)
tttGCCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCg > 1:4643461/1‑93 (MQ=255)
ccacccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACAGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACg > 2:5099548/5‑93 (MQ=255)
cacccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGc > 2:2552463/4‑93 (MQ=255)
cacccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGc > 1:328879/4‑93 (MQ=255)
acccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGcc > 1:3241281/3‑93 (MQ=255)
cccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGccc > 1:2058452/2‑93 (MQ=255)
ccaccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCa > 1:3524415/1‑93 (MQ=255)
caccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAc < 1:886736/93‑1 (MQ=255)
caccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAc > 2:2097066/1‑93 (MQ=255)
caccGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCCCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAc < 1:3460388/93‑1 (MQ=255)
accGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACg > 1:3090388/1‑93 (MQ=255)
accGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACg > 1:2356080/1‑93 (MQ=255)
cGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGa > 1:5388235/1‑93 (MQ=255)
cGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGa < 2:4825967/93‑1 (MQ=255)
gAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAg < 1:3419591/93‑1 (MQ=255)
aaCCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGc > 2:6209495/1‑93 (MQ=255)
ccAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGa > 2:5885208/1‑93 (MQ=255)
ccAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGa < 2:4731926/93‑1 (MQ=255)
cAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGaa < 2:3060716/93‑1 (MQ=255)
cAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGaa < 1:676259/93‑1 (MQ=255)
aaTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAt > 1:1196441/1‑93 (MQ=255)
cgcgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATTATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACa < 2:5241615/93‑1 (MQ=255)
cgcgGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACa > 1:3608991/1‑93 (MQ=255)
aCAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGt > 2:5990983/1‑93 (MQ=255)
aCAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGt < 1:367908/93‑1 (MQ=255)
aaaGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTc > 1:2636308/1‑93 (MQ=255)
aaGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTcc > 2:1323100/1‑93 (MQ=255)
aaGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTcc > 2:560936/1‑93 (MQ=255)
aGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAACGAATCGACAACCGTTCCa < 2:6268501/93‑1 (MQ=255)
gTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCAc > 1:4916945/1‑93 (MQ=255)
gTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCAc > 2:4129586/1‑93 (MQ=255)
ttAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACt < 1:4244334/93‑1 (MQ=255)
ttAACAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACt < 2:801217/93‑1 (MQ=255)
tAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACtg > 1:3137164/1‑93 (MQ=255)
aGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACtgt < 2:450053/93‑1 (MQ=255)
cAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGc > 1:4793818/1‑93 (MQ=255)
cAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGc > 1:2521149/1‑93 (MQ=255)
aaGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCg < 2:400379/93‑1 (MQ=255)
aGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCgg < 2:2054399/93‑1 (MQ=255)
aGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCgg < 1:1488614/93‑1 (MQ=255)
aGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCgg > 1:3563678/1‑93 (MQ=255)
ggtggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGt > 1:4265687/1‑93 (MQ=255)
gtggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTc > 2:3490935/1‑93 (MQ=255)
gtggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTc < 1:2237244/93‑1 (MQ=255)
ggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCaa > 1:5303639/1‑93 (MQ=255)
ggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCaa < 1:1997064/93‑1 (MQ=255)
ggtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCaa < 2:1240346/93‑1 (MQ=255)
gtTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAAc > 2:5575644/1‑93 (MQ=255)
tATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACgg > 1:4835835/1‑93 (MQ=255)
tATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACgg > 2:4521447/1‑93 (MQ=255)
tCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGcc > 2:4312434/1‑93 (MQ=255)
tCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGcc > 2:2963133/1‑93 (MQ=255)
cGAAGACCGCGGAATGATGTGATACGTCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGccc < 2:6444958/93‑1 (MQ=255)
gAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCTTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCg > 2:3659747/1‑93 (MQ=255)
aGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGAt > 1:5807516/1‑93 (MQ=255)
gACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATa > 2:5740080/1‑93 (MQ=255)
|
ATCAGCATCTTCATGGCGATCAACATCATAATTTGCCA‑CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATA > NC_000913/842784‑842961
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCA‑CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCAC > NC_000913/842781‑842966
|
TTTATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCG < SRR4302537.850341/94‑1 (MQ=60)
TTTATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCG > SRR4302537.4268837/1‑94 (MQ=60)
TATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCG < SRR4302537.2872740/94‑1 (MQ=60)
TATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCG > SRR4302537.596990/1‑94 (MQ=60)
TATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCG > SRR4302537.3166523/1‑94 (MQ=60)
AGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAAT < SRR4302537.5379449/94‑1 (MQ=60)
AGCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAAT > SRR4302537.5979092/1‑94 (MQ=60)
GCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATG < SRR4302537.1458138/94‑1 (MQ=60)
GCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATG > SRR4302537.1679639/1‑94 (MQ=60)
GCATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATG < SRR4302537.2040575/94‑1 (MQ=60)
ATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGAT > SRR4302537.2457857/1‑94 (MQ=60)
ATCTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGAT > SRR4302537.5728754/1‑94 (MQ=60)
TTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGT < SRR4302537.1574109/94‑1 (MQ=60)
CTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGT > SRR4302537.3284961/1‑94 (MQ=60)
CTTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGT < SRR4302537.5665589/94‑1 (MQ=60)
TTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTG > SRR4302537.4294517/1‑94 (MQ=60)
TTCATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTG > SRR4302537.4633146/1‑94 (MQ=60)
ATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATA < SRR4302537.3823741/94‑1 (MQ=60)
ATGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATA < SRR4302537.5551608/94‑1 (MQ=60)
TGGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATAC < SRR4302537.3781655/94‑1 (MQ=60)
TGCCGATCATCATCATAATTGG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATAC < SRR4302537.3781477/94‑1 (MQ=60)
GGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACG < SRR4302537.3353727/94‑1 (MQ=60)
GGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACG < SRR4302537.609717/94‑1 (MQ=60)
GGCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACG < SRR4302537.2517837/94‑1 (MQ=60)
GCGATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGC < SRR4302537.5168513/94‑1 (MQ=60)
GATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCC < SRR4302537.4117987/94‑1 (MQ=60)
ATCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCC < SRR4302537.828660/94‑1 (MQ=60)
TCAACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCG < SRR4302537.3018840/94‑1 (MQ=60)
ACATCATAATTTGCCCC‑CCACCGAACCAAGCCCGCGGCAAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTA < SRR4302537.2582514/94‑1 (MQ=60)
ACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTA > SRR4302537.5243665/1‑94 (MQ=60)
ACATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTA < SRR4302537.4311400/94‑1 (MQ=60)
CATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTAT > SRR4302537.1755055/1‑94 (MQ=60)
CATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTAT < SRR4302537.4481776/94‑1 (MQ=60)
CATCATAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTAT > SRR4302537.2227174/1‑94 (MQ=60)
CATAACTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCT < SRR4302537.6379571/94‑1 (MQ=60)
TAATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGT < SRR4302537.335955/94‑1 (MQ=60)
AATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTC < SRR4302537.4304870/94‑1 (MQ=60)
AATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTC < SRR4302537.108205/94‑1 (MQ=60)
AATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTC < SRR4302537.1282785/94‑1 (MQ=60)
ATTTG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCG > SRR4302537.4675573/1‑94 (MQ=60)
TG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTAC < SRR4302537.3325835/94‑1 (MQ=60)
TG‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTAC < SRR4302537.4709866/94‑1 (MQ=60)
G‑CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACG < SRR4302537.1612721/94‑1 (MQ=60)
CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGC > SRR4302537.1486563/1‑94 (MQ=60)
CCACCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGC > SRR4302537.331160/1‑94 (MQ=60)
cacCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCC > SRR4302537.3264125/4‑94 (MQ=60)
acCCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCC > SRR4302537.2072904/3‑94 (MQ=60)
C‑CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCA > SRR4302537.3549347/1‑94 (MQ=60)
CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCAC > SRR4302537.363142/1‑94 (MQ=60)
CGCCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACG > SRR4302537.5417268/1‑94 (MQ=60)
CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACG > SRR4302537.3111942/1‑94 (MQ=60)
CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACG > SRR4302537.2372693/1‑94 (MQ=60)
CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACG < SRR4302537.892838/94‑1 (MQ=60)
CACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCCCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACG < SRR4302537.3484855/94‑1 (MQ=60)
CCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGA > SRR4302537.5425058/1‑94 (MQ=60)
CGAACCACTGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAG < SRR4302537.3737682/94‑1 (MQ=60)
GAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGC < SRR4302537.3443797/94‑1 (MQ=60)
CCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAA > SRR4302537.5215686/1‑94 (MQ=60)
CAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAT > SRR4302537.3846573/1‑94 (MQ=60)
CAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAT > SRR4302537.1204748/1‑94 (MQ=60)
CAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAAT < SRR4302537.680892/94‑1 (MQ=60)
AATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCCCGGGGAGAATC > SRR4302537.4880997/1‑94 (MQ=60)
CCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACA > SRR4302537.3634429/1‑94 (MQ=60)
CGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACAT < SRR4302537.1144246/94‑1 (MQ=60)
CGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACAT < SRR4302537.2292757/94‑1 (MQ=60)
GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATC < SRR4302537.4637754/94‑1 (MQ=60)
GCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATC < SRR4302537.6083914/94‑1 (MQ=60)
CGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCC < SRR4302537.1690455/94‑1 (MQ=60)
CGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCC > SRR4302537.1236980/1‑94 (MQ=60)
CGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCC > SRR4302537.1896632/1‑94 (MQ=60)
GGACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACCCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCG < SRR4302537.3479297/94‑1 (MQ=60)
GACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGT > SRR4302537.3496128/1‑94 (MQ=60)
ACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTT < SRR4302537.370459/94‑1 (MQ=60)
ACAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTT > SRR4302537.133046/1‑94 (MQ=60)
CAAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTC > SRR4302537.2654754/1‑94 (MQ=60)
AAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCC > SRR4302537.4837848/1‑94 (MQ=60)
AAAGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCC > SRR4302537.5773094/1‑94 (MQ=60)
AGTTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCAC > SRR4302537.4950870/1‑94 (MQ=60)
TTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTG > SRR4302537.3159184/1‑94 (MQ=60)
TTAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTG < SRR4302537.4273835/94‑1 (MQ=60)
TAGCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGT < SRR4302537.5349863/94‑1 (MQ=60)
GCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGC > SRR4302537.4826904/1‑94 (MQ=60)
GCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGC > SRR4302537.2538848/1‑94 (MQ=60)
GCAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGC < SRR4302537.6371821/94‑1 (MQ=60)
CAAAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCC > SRR4302537.3138343/1‑94 (MQ=60)
AAGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGG > SRR4302537.3588811/1‑94 (MQ=60)
AGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGT > SRR4302537.4295327/1‑94 (MQ=60)
AGGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGT < SRR4302537.1498974/94‑1 (MQ=60)
GGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTC > SRR4302537.3560353/1‑94 (MQ=60)
GGTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTC > SRR4302537.4381246/1‑94 (MQ=60)
GTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCA < SRR4302537.237708/94‑1 (MQ=60)
GTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCA < SRR4302537.2253023/94‑1 (MQ=60)
GTGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCA < SRR4302537.5674015/94‑1 (MQ=60)
TGGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAA > SRR4302537.5340095/1‑94 (MQ=60)
GGTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAAC < SRR4302537.2010949/94‑1 (MQ=60)
GTTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACG < SRR4302537.5094140/94‑1 (MQ=60)
TTATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGG > SRR4302537.4869227/1‑94 (MQ=60)
ATCGAAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCC > SRR4302537.4555155/1‑94 (MQ=60)
AAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGAT > SRR4302537.5847340/1‑94 (MQ=60)
AAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGAT > SRR4302537.416993/1‑94 (MQ=60)
AAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGAT > SRR4302537.6513580/1‑94 (MQ=60)
AAGACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGAT > SRR4302537.3703222/1‑94 (MQ=60)
GACCGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAG < SRR4302537.5317556/94‑1 (MQ=60)
CGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCA < SRR4302537.4542538/94‑1 (MQ=60)
CGCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCA > SRR4302537.2273974/1‑94 (MQ=60)
GCGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCAC < SRR4302537.1907178/94‑1 (MQ=60)
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TTTATCAGCATCTTCATGGCGATCAACATCATAATTTG‑CCA‑CCACCGAACCAATGCCGCGGACAAAGTTAGCAAAGGTGGTTATCGAAGACCACGGAATGATGTGATACGCCCCGGTATCCTGTCGTACGCCCACGGAGCGAATCGACATCCGTTCCACTGTGCCGGTCAACGGCCCGATAGTCAC > NC_000913/842781‑842966
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
