Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
916,368 |
(G)5→4 |
coding (673/1659 nt) |
ybjD → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 916,364 | 0 | G | . | 97.8%
| 805.5
/ 6.8
| 180 | coding (669/1659 nt) | ybjD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (3/1); new base . (95/81); total (98/82) |
| Fisher's exact test for biased strand distribution p-value = 6.27e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01 |
Only 100 of 212 total aligned reads displayed.
TTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGA > NC_000913/916272‑916452
|
ttATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAg > 1:4006384/1‑93 (MQ=255)
ttATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAg < 2:4419308/93‑1 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg < 2:3301142/93‑1 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg > 1:1289661/1‑93 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg < 1:3310251/93‑1 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg < 2:5896221/93‑1 (MQ=255)
aTCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg < 1:2957559/93‑1 (MQ=255)
aTCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg < 2:4680834/93‑1 (MQ=255)
tCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgggg < 1:5334561/93‑1 (MQ=255)
tCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggggccg > 1:166095/1‑90 (MQ=255)
caTCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGAc > 1:325705/1‑93 (MQ=255)
aTCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACa > 1:6110438/1‑93 (MQ=255)
tCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAg < 2:5233180/93‑1 (MQ=255)
tCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAg < 2:307358/93‑1 (MQ=255)
cGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGTCGGACAGgc > 2:31666/1‑93 (MQ=255)
gCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGgcg > 2:2285264/1‑93 (MQ=255)
aaaaTCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGcgcg > 1:6147510/1‑93 (MQ=255)
aaaaTCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGcgcg > 2:4199711/1‑93 (MQ=255)
aaaaTCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGcacg > 1:6337570/1‑93 (MQ=255)
aaaTCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGcgcgc > 1:5180861/1‑92 (MQ=255)
aTCTCTCTGATGGGCAGATTCGTCAGTGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGata < 1:6009456/93‑1 (MQ=255)
tctctcTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGatat > 1:1749725/1‑93 (MQ=255)
tctctcTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGatat > 2:4382640/1‑93 (MQ=255)
ctctctGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATc < 2:5197339/93‑1 (MQ=255)
tctGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GCGGCCGGACAGGCGCGATATCGtt > 1:5847495/1‑93 (MQ=255)
tGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTa > 1:2665737/1‑93 (MQ=255)
gATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTaa < 2:1982660/93‑1 (MQ=255)
gATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTaa > 2:2534634/1‑93 (MQ=255)
gATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTaa > 1:4903597/1‑93 (MQ=255)
gATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTaa < 1:2034538/93‑1 (MQ=255)
aTGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAt > 2:978439/1‑93 (MQ=255)
aTGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAt < 2:1608482/93‑1 (MQ=255)
aTGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAt < 1:5789300/93‑1 (MQ=255)
aTGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAt > 2:814094/1‑93 (MQ=255)
aTGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAt < 1:2506573/93‑1 (MQ=255)
tGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATg > 1:2284383/1‑93 (MQ=255)
tGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATg > 1:3413627/1‑93 (MQ=255)
tGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATg > 2:3574767/1‑93 (MQ=255)
tGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATg > 2:4853398/1‑93 (MQ=255)
gggCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgc > 2:3976214/1‑93 (MQ=255)
ggCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcg < 1:2476545/93‑1 (MQ=255)
ggCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcg > 1:3103446/1‑93 (MQ=255)
cAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggc < 2:3256611/93‑1 (MQ=255)
cAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggc < 2:1888298/93‑1 (MQ=255)
gATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcgg > 1:1053372/1‑93 (MQ=255)
gATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcgg > 2:6198903/1‑93 (MQ=255)
gATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcgg > 2:5063506/1‑93 (MQ=255)
gATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcgg > 1:3158445/1‑93 (MQ=255)
gATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcgg < 1:649938/93‑1 (MQ=255)
ttCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcggcg > 2:5777645/1‑93 (MQ=255)
ttCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATgcggcggcg > 2:1798044/1‑93 (MQ=255)
tCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGa < 2:3643763/93‑1 (MQ=255)
cGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAg < 2:4723985/93‑1 (MQ=255)
cGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAg < 2:2508077/93‑1 (MQ=255)
gTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGc < 1:4429730/93‑1 (MQ=255)
cAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCa < 1:5542899/93‑1 (MQ=255)
cAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCa < 2:700880/93‑1 (MQ=255)
aGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAg > 1:4267472/1‑93 (MQ=255)
aGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAg > 1:4719487/1‑93 (MQ=255)
ggACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCa > 1:2771194/1‑93 (MQ=255)
ggACTTTCCGCAAGGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCa > 2:6359147/1‑93 (MQ=255)
aCTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAAt > 1:6462165/1‑93 (MQ=255)
tttCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGa < 1:5643467/93‑1 (MQ=255)
tttCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGa < 1:1719386/93‑1 (MQ=255)
tCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGc < 1:4805995/93‑1 (MQ=255)
tCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGc < 2:1091472/93‑1 (MQ=255)
tCCGCAATGGTACAGCTGCTTGAGCATTATTGCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGc < 2:376925/93‑1 (MQ=255)
ccGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCa < 1:4969088/93‑1 (MQ=255)
cGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCaa < 2:4219995/93‑1 (MQ=255)
cGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCaa < 2:1353169/93‑1 (MQ=255)
cGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCaa > 1:5072561/1‑93 (MQ=255)
aaTGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGa > 2:1266523/1‑93 (MQ=255)
tACACCTGCTTGAGCATTATTCCTCTGAGCA‑GGGGCGGGACAGGCGCGATATCGTTGAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTg < 2:3892492/93‑1 (MQ=255)
cAGCTGCTTGAGTATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGgc < 2:1369801/93‑1 (MQ=255)
cAGCTGCTTGAGAATTATTTCTATGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTgg < 2:1527007/93‑1 (MQ=255)
tgctTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTa > 2:605505/1‑93 (MQ=255)
ctTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATc > 2:5182957/1‑93 (MQ=255)
ctTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATc < 2:447802/93‑1 (MQ=255)
ttGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCt < 1:1536912/93‑1 (MQ=255)
tGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTg < 1:2193915/93‑1 (MQ=255)
aGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTgg > 1:111761/1‑93 (MQ=255)
aGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGa < 2:5955854/93‑1 (MQ=255)
gCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGat > 1:4368870/1‑93 (MQ=255)
attattTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGatat < 2:2216306/93‑1 (MQ=255)
attattTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGatat < 1:5319877/93‑1 (MQ=255)
ttattTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATatc < 1:1408571/93‑1 (MQ=255)
ttattTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATatc > 1:2685850/1‑93 (MQ=255)
attTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATatcat > 1:3251811/1‑93 (MQ=255)
tttCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATatcat < 1:3726395/93‑1 (MQ=255)
ttCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATAtcatca > 2:2793226/1‑93 (MQ=255)
tctcTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCaa > 2:4618646/1‑93 (MQ=255)
ctctGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCCTCAAc < 2:4090169/93‑1 (MQ=255)
tctGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAAcc < 2:1029538/93‑1 (MQ=255)
tctGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAAcc > 2:4960135/1‑93 (MQ=255)
tctGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAAcc > 2:2648977/1‑93 (MQ=255)
ctGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCg < 1:783944/93‑1 (MQ=255)
tGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCgg < 2:5569466/93‑1 (MQ=255)
tGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCgg > 1:3620330/1‑93 (MQ=255)
gAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGga > 2:3344558/1‑93 (MQ=255)
gAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGga < 2:3809259/93‑1 (MQ=255)
|
TTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGA > NC_000913/916272‑916452
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGA > NC_000913/916275‑916459
|
TCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGC < SRR4302537.5371141/94‑1 (MQ=60)
CCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGCC < SRR4302537.155275/94‑1 (MQ=60)
CTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCG > SRR4302537.3876426/1‑94 (MQ=60)
CTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCG > SRR4302537.167285/1‑94 (MQ=60)
ACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGAC > SRR4302537.327963/1‑94 (MQ=60)
CATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACA > SRR4302537.6152432/1‑94 (MQ=60)
CATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACA > SRR4302537.2400871/1‑94 (MQ=60)
CATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACA > SRR4302537.4957333/1‑94 (MQ=60)
ATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAG < SRR4302537.4408940/94‑1 (MQ=60)
TCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGG < SRR4302537.6490518/94‑1 (MQ=60)
TCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGG > SRR4302537.357605/1‑94 (MQ=60)
TCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGG < SRR4302537.5151475/94‑1 (MQ=60)
CGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCG > SRR4302537.265901/1‑94 (MQ=60)
CAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCG > SRR4302537.6189794/1‑94 (MQ=60)
CAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCACG > SRR4302537.6380885/1‑94 (MQ=60)
AAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGC > SRR4302537.5216512/1‑94 (MQ=60)
ATCTCTCTGATGGGCAGATTCGTCAGTGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATAT < SRR4302537.6050746/94‑1 (MQ=60)
ATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATAT > SRR4302537.1761925/1‑94 (MQ=60)
TCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATC < SRR4302537.4104188/94‑1 (MQ=60)
CTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGTGCA‑GGGGCCGGACAGGCGCGATATCG < SRR4302537.4565980/94‑1 (MQ=60)
CTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCG > SRR4302537.3282620/1‑94 (MQ=60)
CTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTT > SRR4302537.5820963/1‑94 (MQ=60)
CTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GCGGCCGGACAGGCGCGATATCGTT > SRR4302537.5887591/1‑94 (MQ=60)
CTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTA > SRR4302537.5987457/1‑94 (MQ=60)
CTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTA < SRR4302537.6071278/94‑1 (MQ=60)
CTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTA > SRR4302537.2684358/1‑94 (MQ=60)
TGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAA > SRR4302537.4937442/1‑94 (MQ=60)
GATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAT < SRR4302537.2048718/94‑1 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG > SRR4302537.3437801/1‑94 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG > SRR4302537.2496411/1‑94 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG < SRR4302537.2524204/94‑1 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG < SRR4302537.5829000/94‑1 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG > SRR4302537.2300499/1‑94 (MQ=60)
ATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATG > SRR4302537.1756657/1‑94 (MQ=60)
GGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCG > SRR4302537.3125122/1‑94 (MQ=60)
GGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGG < SRR4302537.2493954/94‑1 (MQ=60)
GGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGG > SRR4302537.2051407/1‑94 (MQ=60)
GGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGG < SRR4302537.3277632/94‑1 (MQ=60)
CAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCG > SRR4302537.6099734/1‑94 (MQ=60)
AGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGG > SRR4302537.1060638/1‑94 (MQ=60)
AGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGG > SRR4302537.3180615/1‑94 (MQ=60)
GATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGC < SRR4302537.654366/94‑1 (MQ=60)
GATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGC < SRR4302537.436633/94‑1 (MQ=60)
ATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCG < SRR4302537.5318827/94‑1 (MQ=60)
GTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCC > SRR4302537.5363113/1‑94 (MQ=60)
GTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCC < SRR4302537.4460323/94‑1 (MQ=60)
CAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAG < SRR4302537.5580746/94‑1 (MQ=60)
CAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAG > SRR4302537.4752120/1‑94 (MQ=60)
CAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAG > SRR4302537.4297122/1‑94 (MQ=60)
AGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGC > SRR4302537.2186612/1‑94 (MQ=60)
GGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCA > SRR4302537.2790561/1‑94 (MQ=60)
GGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAA > SRR4302537.5887553/1‑94 (MQ=60)
GACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAAT > SRR4302537.503163/1‑94 (MQ=60)
GACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAAT > SRR4302537.6505950/1‑94 (MQ=60)
TTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAG < SRR4302537.1731400/94‑1 (MQ=60)
TTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAG < SRR4302537.5682090/94‑1 (MQ=60)
TTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGC > SRR4302537.2247234/1‑94 (MQ=60)
TCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCA < SRR4302537.1151516/94‑1 (MQ=60)
TCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCA < SRR4302537.4839143/94‑1 (MQ=60)
CCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAA < SRR4302537.766524/94‑1 (MQ=60)
CCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAA > SRR4302537.5107484/1‑94 (MQ=60)
CCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAA < SRR4302537.5003333/94‑1 (MQ=60)
AATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAA < SRR4302537.618239/94‑1 (MQ=60)
ATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAG > SRR4302537.6518509/1‑94 (MQ=60)
TGTACAGCTGCTTGAGCATTATTTCTCGGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAAGGCGGCGGCGAGCCAGCAATGAGCAACGAAGCT < SRR4302537.1857397/94‑1 (MQ=60)
GGTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCT < SRR4302537.992419/94‑1 (MQ=60)
GTACAGCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTG < SRR4302537.3168588/94‑1 (MQ=60)
GCTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCT > SRR4302537.3350814/1‑94 (MQ=60)
CTGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTA > SRR4302537.285131/1‑94 (MQ=60)
TGCTTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTAT > SRR4302537.5627455/1‑94 (MQ=60)
TTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTG > SRR4302537.3672969/1‑94 (MQ=60)
TTGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTG < SRR4302537.1547646/94‑1 (MQ=60)
TGAGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGG < SRR4302537.2209372/94‑1 (MQ=60)
GAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGG > SRR4302537.112579/1‑94 (MQ=60)
AGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGAT > SRR4302537.1085255/1‑94 (MQ=60)
AGCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGAT > SRR4302537.4399064/1‑94 (MQ=60)
GCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATA > SRR4302537.3902685/1‑94 (MQ=60)
GCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATA < SRR4302537.3112399/94‑1 (MQ=60)
GCATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATA > SRR4302537.622386/1‑94 (MQ=60)
CATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATAT > SRR4302537.3184922/1‑94 (MQ=60)
ATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATC < SRR4302537.5356393/94‑1 (MQ=60)
ATTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATC > SRR4302537.2704595/1‑94 (MQ=60)
TTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCA < SRR4302537.1418382/94‑1 (MQ=60)
TTATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCA < SRR4302537.1409158/94‑1 (MQ=60)
TATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCAT > SRR4302537.3274731/1‑94 (MQ=60)
TATTTCTCGGAGCA‑GGGTCCGGACAGGCGCTATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCAT < SRR4302537.4860332/94‑1 (MQ=60)
ATTTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATC > SRR4302537.2772404/1‑94 (MQ=60)
TTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATC < SRR4302537.3752575/94‑1 (MQ=60)
TTCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAA < SRR4302537.1434001/94‑1 (MQ=60)
TCTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAAC < SRR4302537.1723167/94‑1 (MQ=60)
CTCTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACC > SRR4302537.3084305/1‑94 (MQ=60)
CTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGG < SRR4302537.789322/94‑1 (MQ=60)
CTGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGG > SRR4302537.3645846/1‑94 (MQ=60)
TGAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGGGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGA < SRR4302537.5542471/94‑1 (MQ=60)
GAGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGAT > SRR4302537.707657/1‑94 (MQ=60)
AGCA‑GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATG < SRR4302537.1719427/94‑1 (MQ=60)
AGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATT < SRR4302537.199779/94‑1 (MQ=60)
GGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTG < SRR4302537.4689208/94‑1 (MQ=60)
GGGGCCGCACAGGCGCAATATCGTTTAATGCGGCGGGGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTG < SRR4302537.4964825/94‑1 (MQ=60)
GGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGA > SRR4302537.1017251/1‑94 (MQ=60)
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TCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGA > NC_000913/916275‑916459
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
