Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
976,048 |
A→G |
Q167R (CAG→CGG) |
mukB → |
MukB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 976,048 | 0 | A | G | 100.0%
| 645.5
/ NA
| 185 | Q167R (CAG→CGG) | mukB | MukB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/83); total (102/83) |
Only 100 of 191 total aligned reads displayed.
CCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAT > NC_000913/975958‑976137
|
ccGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAGGGCGTGCAGTTTAAACGGt < 2:6280875/93‑1 (MQ=255)
ccGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGt < 2:1393406/93‑1 (MQ=255)
ccGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGt > 2:3810354/1‑93 (MQ=255)
ccGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTACAGTTTAAACGGt > 2:3326039/1‑93 (MQ=255)
ccGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGCGCAGTTTAAACGGt > 2:3031865/1‑93 (MQ=255)
gAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTc < 2:2402566/93‑1 (MQ=255)
gAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTc < 2:841960/93‑1 (MQ=255)
gAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTc < 1:4787764/93‑1 (MQ=255)
aaaCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCa > 2:5659269/1‑93 (MQ=255)
aaaCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGAGTGCAGTTTAAACGGttga > 1:4657523/1‑91 (MQ=255)
aaCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCaa > 1:742018/1‑93 (MQ=255)
aaCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCaa < 2:5882417/93‑1 (MQ=255)
aaCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCaa < 2:2014848/93‑1 (MQ=255)
aCCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAAc < 2:2501485/93‑1 (MQ=255)
cTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTcc < 2:753212/93‑1 (MQ=255)
cTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTcc > 2:4046012/1‑93 (MQ=255)
tGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCa > 2:92373/1‑93 (MQ=255)
aacgaacgCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCAtt < 1:4196871/93‑1 (MQ=255)
gaacgCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACt > 1:769644/1‑93 (MQ=255)
aacgCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTg > 1:3865090/1‑93 (MQ=255)
acgCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGa > 2:621850/1‑93 (MQ=255)
cgCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGAt < 2:3933621/93‑1 (MQ=255)
gCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGAtt > 1:4775486/1‑93 (MQ=255)
gCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGAtt > 1:4128790/1‑93 (MQ=255)
cAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTAc > 2:1760415/1‑93 (MQ=255)
gcgcgcGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCAc < 1:1248698/93‑1 (MQ=255)
gcgcgTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTc > 1:5588278/1‑93 (MQ=255)
gcgcgTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTc > 2:5276111/1‑93 (MQ=255)
gcgTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGc < 1:463973/93‑1 (MQ=255)
gTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTg > 2:2684761/1‑93 (MQ=255)
gTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTg > 1:3909936/1‑93 (MQ=255)
tgctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGa > 1:4726086/1‑93 (MQ=255)
tgctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGa < 1:6181402/93‑1 (MQ=255)
gctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGAt > 2:4947676/1‑93 (MQ=255)
ctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATg < 2:479232/93‑1 (MQ=255)
ctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATg < 2:4038172/93‑1 (MQ=255)
ctgcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATg > 2:2764053/1‑93 (MQ=255)
gcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGtt < 1:5848609/93‑1 (MQ=255)
gcCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGtt > 1:5502496/1‑93 (MQ=255)
cGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCg > 1:1674982/1‑93 (MQ=255)
gCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGa > 2:78214/1‑93 (MQ=255)
gCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGCTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGa < 1:1712857/93‑1 (MQ=255)
ttAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATc > 2:377506/1‑93 (MQ=255)
aaCGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTg > 1:1409909/1‑93 (MQ=255)
aaCGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTg > 1:5519023/1‑93 (MQ=255)
aCGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTgg > 1:4533540/1‑93 (MQ=255)
cGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTggg < 2:6136735/93‑1 (MQ=255)
gAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGc < 1:3695466/93‑1 (MQ=255)
gAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGc > 1:4415103/1‑93 (MQ=255)
gAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGGTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGc > 2:6467720/1‑93 (MQ=255)
aGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCTATCTGGGca > 1:4875367/1‑93 (MQ=255)
gCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGcat > 2:2558067/1‑93 (MQ=255)
gAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGcatcat < 2:5953118/93‑1 (MQ=255)
gAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGcatcat > 1:5061731/1‑93 (MQ=255)
aaaGACAAGCTCGAGGCGATGGGAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCatcatc > 2:406840/1‑93 (MQ=255)
aaGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATcg > 1:1295117/1‑93 (MQ=255)
aaGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATcg > 2:5442751/1‑93 (MQ=255)
aGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATcgc < 1:2466678/93‑1 (MQ=255)
gACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATcgcg > 2:2256455/1‑93 (MQ=255)
aCAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCCTTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATcgcgc > 1:2061158/1‑93 (MQ=255)
aaGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgt > 1:5257515/1‑93 (MQ=255)
aaGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgt < 2:3974875/93‑1 (MQ=255)
aGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgtc > 1:102976/1‑93 (MQ=255)
aGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgtc < 1:6342292/93‑1 (MQ=255)
gCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgtcg > 2:1864370/1‑93 (MQ=255)
cTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGcgtcgt < 1:6389758/93‑1 (MQ=255)
tCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTTGGCATCATCGCGCgtcgtc > 2:1955511/1‑93 (MQ=255)
tCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCgtcgtc > 1:5315691/1‑93 (MQ=255)
tCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCgtcgtc > 1:3842146/1‑93 (MQ=255)
cGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCt < 1:2617616/93‑1 (MQ=255)
cGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCt < 1:3973692/93‑1 (MQ=255)
aGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTgc > 2:342412/1‑93 (MQ=255)
aGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTgc > 1:2903242/1‑93 (MQ=255)
ggCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTgcg < 1:2831278/93‑1 (MQ=255)
gCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTgcgc < 2:3454180/93‑1 (MQ=255)
cGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCt > 1:2747716/1‑93 (MQ=255)
gATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGGTCGATCTGGGCATCATCGCGCCTCGTCTGAGCTc > 2:3230089/1‑93 (MQ=255)
aTGGAAGGCGTGCAGTCTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTcc > 1:1345772/1‑93 (MQ=255)
tGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCg > 2:2824187/1‑93 (MQ=255)
aGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATc < 2:5193049/93‑1 (MQ=255)
aGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATc > 1:878643/1‑93 (MQ=255)
ggCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCt > 1:2183679/1‑93 (MQ=255)
cGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGa > 1:4697315/1‑93 (MQ=255)
gTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAc > 2:435335/1‑93 (MQ=255)
gTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAc > 2:4582657/1‑93 (MQ=255)
gTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAc > 1:333430/1‑93 (MQ=255)
tGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAcc < 2:1816162/93‑1 (MQ=255)
gCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCg > 1:1971771/1‑93 (MQ=255)
cAGTTTAAACGGTTCAACTCCATTACTGATTACCGCTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGt < 2:2029793/93‑1 (MQ=255)
cAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGt < 2:4288104/93‑1 (MQ=255)
cAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGt < 1:4001340/93‑1 (MQ=255)
aGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTa > 1:2662071/1‑93 (MQ=255)
gTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAg < 1:2447945/93‑1 (MQ=255)
gTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCCCGCGTCGTCTGCGCTCCGCATCTGACCGTAg < 1:3550497/93‑1 (MQ=255)
ttAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCa > 2:5771810/1‑93 (MQ=255)
ttAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCa > 1:3021960/1‑93 (MQ=255)
aaCGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAt < 1:6294159/93‑1 (MQ=255)
aaCGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAt > 1:5485762/1‑93 (MQ=255)
aaCGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAt < 1:4289130/93‑1 (MQ=255)
aaCGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAt < 1:1193888/93‑1 (MQ=255)
|
CCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAT > NC_000913/975958‑976137
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA > NC_000913/975956‑976141
|
GACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGG < SRR4302537.6301859/94‑1 (MQ=60)
GACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGG < SRR4302537.3592933/94‑1 (MQ=60)
CGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTC > SRR4302537.131412/1‑94 (MQ=60)
GAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCA < SRR4302537.4820812/94‑1 (MQ=60)
GAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGAGTGCAGTTTAAACGGTTGA > SRR4302537.4689724/1‑94 (MQ=60)
AAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAA > SRR4302537.747083/1‑94 (MQ=60)
AAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAA > SRR4302537.763735/1‑94 (MQ=60)
ACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTACCGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACT < SRR4302537.3938356/94‑1 (MQ=60)
CCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCC < SRR4302537.4035579/94‑1 (MQ=60)
TGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCAT > SRR4302537.5526471/1‑94 (MQ=60)
TGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCAT < SRR4302537.5502428/94‑1 (MQ=60)
GAACGAACGCCAGGCGCGCGTGCTGCCGCTTAAAGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATT > SRR4302537.2153166/1‑94 (MQ=60)
AACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTA < SRR4302537.4226179/94‑1 (MQ=60)
CGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACT > SRR4302537.774922/1‑94 (MQ=60)
GAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTG > SRR4302537.3892144/1‑94 (MQ=60)
CGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATT > SRR4302537.4808453/1‑94 (MQ=60)
CGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATT > SRR4302537.4157607/1‑94 (MQ=60)
CCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTAC > SRR4302537.6131648/1‑94 (MQ=60)
GCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACT > SRR4302537.2946774/1‑94 (MQ=60)
GCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACT < SRR4302537.1257395/94‑1 (MQ=60)
GCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACT < SRR4302537.4825495/94‑1 (MQ=60)
CGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTC > SRR4302537.5626490/1‑94 (MQ=60)
CGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGC > SRR4302537.4541119/1‑94 (MQ=60)
GCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCT < SRR4302537.467167/94‑1 (MQ=60)
GCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCT > SRR4302537.2430638/1‑94 (MQ=60)
GCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCT > SRR4302537.2890106/1‑94 (MQ=60)
GCGTGCTACCGCTTAACGAGCTGAAAGACAAGCGCGAGGCGATGGAAGCCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCT < SRR4302537.467168/94‑1 (MQ=60)
CGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTG > SRR4302537.3937268/1‑94 (MQ=60)
CGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTG < SRR4302537.3547230/94‑1 (MQ=60)
CGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTG > SRR4302537.850339/1‑94 (MQ=60)
GTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGA > SRR4302537.4758753/1‑94 (MQ=60)
TGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGAT < SRR4302537.6223980/94‑1 (MQ=60)
TGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTT > SRR4302537.5540066/1‑94 (MQ=60)
GCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTC < SRR4302537.5888718/94‑1 (MQ=60)
CCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCG < SRR4302537.1754548/94‑1 (MQ=60)
CCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCG > SRR4302537.1686708/1‑94 (MQ=60)
CGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGA > SRR4302537.5248760/1‑94 (MQ=60)
GCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGCTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGAT < SRR4302537.1724817/94‑1 (MQ=60)
CTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGCTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATC < SRR4302537.554215/94‑1 (MQ=60)
TAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTG < SRR4302537.4383500/94‑1 (MQ=60)
TAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTG > SRR4302537.1419730/1‑94 (MQ=60)
TAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTG > SRR4302537.5556706/1‑94 (MQ=60)
AACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGG < SRR4302537.3930543/94‑1 (MQ=60)
AACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGG > SRR4302537.3116991/1‑94 (MQ=60)
AACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGG > SRR4302537.4564931/1‑94 (MQ=60)
CGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGC > SRR4302537.4445583/1‑94 (MQ=60)
CGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGC > SRR4302537.1299351/1‑94 (MQ=60)
GAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCTATCTGGGCA > SRR4302537.4909019/1‑94 (MQ=60)
GAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCA < SRR4302537.3721471/94‑1 (MQ=60)
TGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCAT > SRR4302537.5096578/1‑94 (MQ=60)
AAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCG > SRR4302537.1304122/1‑94 (MQ=60)
AGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCG < SRR4302537.1713728/94‑1 (MQ=60)
AGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCG < SRR4302537.2484021/94‑1 (MQ=60)
GACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCCTTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGC > SRR4302537.2075629/1‑94 (MQ=60)
ACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCG > SRR4302537.5768348/1‑94 (MQ=60)
ACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCG > SRR4302537.2753199/1‑94 (MQ=60)
CAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGT > SRR4302537.1222768/1‑94 (MQ=60)
CAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGT > SRR4302537.5293694/1‑94 (MQ=60)
AAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTC > SRR4302537.103718/1‑94 (MQ=60)
AGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCG < SRR4302537.6385624/94‑1 (MQ=60)
CTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTC > SRR4302537.3869055/1‑94 (MQ=60)
CTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTC < SRR4302537.6433295/94‑1 (MQ=60)
CTCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTC > SRR4302537.5352196/1‑94 (MQ=60)
TCGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCT > SRR4302537.4571111/1‑94 (MQ=60)
CGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTG < SRR4302537.2635919/94‑1 (MQ=60)
CGAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTG < SRR4302537.4001511/94‑1 (MQ=60)
GAGGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGC > SRR4302537.2923638/1‑94 (MQ=60)
GGCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGC < SRR4302537.2851061/94‑1 (MQ=60)
GCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCT > SRR4302537.2766880/1‑94 (MQ=60)
GCGATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCT < SRR4302537.4740886/94‑1 (MQ=60)
GATGGAAGGCGTGCAGTCTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCC > SRR4302537.1355152/1‑94 (MQ=60)
ATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCG < SRR4302537.4773266/94‑1 (MQ=60)
ATGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCG > SRR4302537.5095548/1‑94 (MQ=60)
TGGAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGC < SRR4302537.2768786/94‑1 (MQ=60)
GAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCAT > SRR4302537.3722756/1‑94 (MQ=60)
GAAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCAT > SRR4302537.4182244/1‑94 (MQ=60)
AAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATC > SRR4302537.884687/1‑94 (MQ=60)
AAGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATC > SRR4302537.4813790/1‑94 (MQ=60)
AGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCT > SRR4302537.6340179/1‑94 (MQ=60)
AGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCT > SRR4302537.2199068/1‑94 (MQ=60)
AGGCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCT < SRR4302537.3712756/94‑1 (MQ=60)
GGCGTGCAGTTTAAACGGTTCAACTCCACTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTG < SRR4302537.6261281/94‑1 (MQ=60)
GCGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGA > SRR4302537.4729813/1‑94 (MQ=60)
CGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAC < SRR4302537.2562419/94‑1 (MQ=60)
CGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAC > SRR4302537.531708/1‑94 (MQ=60)
CGTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGAC > SRR4302537.335737/1‑94 (MQ=60)
GTGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACC < SRR4302537.1988823/94‑1 (MQ=60)
TGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCG > SRR4302537.1985482/1‑94 (MQ=60)
TGCAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCG > SRR4302537.150998/1‑94 (MQ=60)
CAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTA > SRR4302537.2680667/1‑94 (MQ=60)
CAGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTA < SRR4302537.4029350/94‑1 (MQ=60)
AGTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAG < SRR4302537.6430896/94‑1 (MQ=60)
AGTGTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAG < SRR4302537.646447/94‑1 (MQ=60)
GTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCTTCTGACCGTAGC > SRR4302537.4310742/1‑94 (MQ=60)
GTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGC < SRR4302537.4025063/94‑1 (MQ=60)
GTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGC > SRR4302537.2637813/1‑94 (MQ=60)
GTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGC < SRR4302537.2465167/94‑1 (MQ=60)
GTTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCCCGCGTCGTCTGCGCTCCGCATCTGACCGTAGC < SRR4302537.3575574/94‑1 (MQ=60)
TTTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCA > SRR4302537.3043025/1‑94 (MQ=60)
TTAAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAA > SRR4302537.1395369/1‑94 (MQ=60)
AAACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAAT > SRR4302537.5523210/1‑94 (MQ=60)
AACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATT < SRR4302537.1202177/94‑1 (MQ=60)
AACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATT < SRR4302537.6337279/94‑1 (MQ=60)
AACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATT > SRR4302537.5263166/1‑94 (MQ=60)
AACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATT < SRR4302537.4318944/94‑1 (MQ=60)
ACGGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTC > SRR4302537.6152825/1‑94 (MQ=60)
GGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA > SRR4302537.6083359/1‑94 (MQ=60)
GGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA > SRR4302537.3221101/1‑94 (MQ=60)
GGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA < SRR4302537.3389395/94‑1 (MQ=60)
GGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA < SRR4302537.3988130/94‑1 (MQ=60)
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GACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTA > NC_000913/975956‑976141
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
