Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,084,024 |
T→C |
D356G (GAC→GGC) |
yeeF ← |
putative amino acid/amine transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,084,024 | 0 | T | C | 97.2%
| 708.6
/ 2.3
| 217 | D356G (GAC→GGC) | yeeF | putative amino acid/amine transport protein |
| Reads supporting (aligned to +/- strand): ref base T (4/2); new base C (130/81); total (134/83) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 232 total aligned reads displayed.
GGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAG > NC_000913/2083935‑2084113
|
gATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGaa > 1:1448091/1‑93 (MQ=255)
gATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGaa > 1:6282458/1‑93 (MQ=255)
aTCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAg > 1:3626778/1‑93 (MQ=255)
tCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGt > 1:3192291/1‑93 (MQ=255)
tCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGt > 2:5309931/1‑93 (MQ=255)
cAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTg > 2:5214701/1‑93 (MQ=255)
aGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGTCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGa < 1:3642020/93‑1 (MQ=255)
aGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGa < 1:5277411/93‑1 (MQ=255)
aGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGa < 2:4936427/93‑1 (MQ=255)
gAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGAt < 2:4581744/93‑1 (MQ=255)
aaCTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGAtt > 1:3082553/1‑93 (MQ=255)
aCTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTg > 2:4690840/1‑93 (MQ=255)
tGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGcc > 2:323043/1‑93 (MQ=255)
tGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGcc > 2:1149990/1‑93 (MQ=255)
gCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCca < 1:5764102/93‑1 (MQ=255)
gCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCca > 1:2018275/1‑93 (MQ=255)
gagaTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCcagc > 2:2845413/1‑93 (MQ=255)
gagaTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCcagc > 2:2391203/1‑93 (MQ=255)
gagaTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCcagc < 2:69560/93‑1 (MQ=255)
agaTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCcagca > 2:2268593/1‑93 (MQ=255)
aTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAgg < 2:4455448/93‑1 (MQ=255)
aTGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAgg < 2:4058851/93‑1 (MQ=255)
gACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGc < 2:5951544/93‑1 (MQ=255)
ccGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCaa > 2:2079322/1‑93 (MQ=255)
gACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATc > 2:1470287/1‑93 (MQ=255)
gACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATc < 2:398972/93‑1 (MQ=255)
aCAGGTTAACGAAAGTGAACGCCACGAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATcg < 2:5905581/93‑1 (MQ=255)
aCAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATcg > 2:3505072/1‑93 (MQ=255)
cAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATcgc > 1:4885227/1‑93 (MQ=255)
cAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATcgc < 1:2473793/93‑1 (MQ=255)
aGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATcgcg < 1:6338989/93‑1 (MQ=255)
ggTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCTGAAGTTGATTGCCAGCAGGGCAATCgcgc < 1:747820/93‑1 (MQ=255)
ttAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCa > 1:4278223/1‑93 (MQ=255)
ttAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCa > 1:1211354/1‑93 (MQ=255)
tAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCaa > 1:3428711/1‑93 (MQ=255)
aaCGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAAc > 2:1733428/1‑93 (MQ=255)
aCGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAAcc > 2:2160958/1‑93 (MQ=255)
aCGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAAcc < 1:1792340/93‑1 (MQ=255)
aCGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAAca > 1:3246774/1‑92 (MQ=255)
cGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCa > 2:5855458/1‑93 (MQ=255)
aaaGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAgg > 1:1528109/1‑93 (MQ=255)
aaaGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAgg > 1:2922996/1‑93 (MQ=255)
aaaGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAgg > 2:4386946/1‑93 (MQ=255)
aaGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGga > 1:2260532/1‑93 (MQ=255)
aGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGgat > 1:4094072/1‑93 (MQ=255)
aaCGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATCGCCAGCAGGGCAATCGCGCCAACCAGGatgatg < 2:5566598/93‑1 (MQ=255)
aCGCCACCAGCGCACCAAAGCTAATAAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGt > 2:2747133/1‑93 (MQ=255)
gCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTc < 2:471280/93‑1 (MQ=255)
ccaccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCa > 2:761628/1‑93 (MQ=255)
ccaccaGCGCACAAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCa < 1:4557338/93‑1 (MQ=255)
caccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAt > 1:816906/1‑93 (MQ=255)
caccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAt > 1:6002224/1‑93 (MQ=255)
caccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAt < 2:6153298/93‑1 (MQ=255)
ccaaGCGCAACAAAGTTAATCAGCGCAGTTGCCATTACAAGGCCGAAGTTGATTGCCAGCAGGAAAATCGCGCCAACCAGGATGATGTTCATc < 1:1387923/90‑1 (MQ=255)
accaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATc < 2:3705064/93‑1 (MQ=255)
accaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATc > 1:5124957/1‑93 (MQ=255)
accaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATc > 2:4419402/1‑93 (MQ=255)
ccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCg > 1:893941/1‑93 (MQ=255)
ccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCg > 2:1934109/1‑93 (MQ=255)
ccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCg > 1:1610146/1‑93 (MQ=255)
ccaGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGCTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCg > 2:5364553/1‑93 (MQ=255)
gcgcACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCg < 2:2919743/93‑1 (MQ=255)
gcACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGa > 1:5013812/1‑93 (MQ=255)
gcACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGa < 1:5644553/93‑1 (MQ=255)
gcACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGa > 2:4170083/1‑93 (MQ=255)
ccACCAAAGTTAATCAGCTCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGa < 1:548228/92‑1 (MQ=255)
cACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAg > 2:860605/1‑93 (MQ=255)
aCCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGt > 2:643838/1‑93 (MQ=255)
aCCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTACCAGCAGGGCAATCGCGCCAACCAGGATGATGGTCATCGCCGGAgg > 2:602633/1‑92 (MQ=255)
ccAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTa > 1:2407783/1‑93 (MQ=255)
ccAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTa < 2:5226635/93‑1 (MQ=255)
ccAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTa > 2:5776520/1‑93 (MQ=255)
ccAAAGTTAATCAGCGCCGTTCCCATTCCCAGGCCGAAGTTGATTCCCAGCAGGCCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTa < 2:1232546/93‑1 (MQ=255)
cAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTAc < 1:6148890/93‑1 (MQ=255)
aaaGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACg > 1:2957166/1‑93 (MQ=255)
aaaGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACg > 2:5123951/1‑93 (MQ=255)
aaaGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACg > 1:2203727/1‑93 (MQ=255)
aaaGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACg > 2:3798665/1‑93 (MQ=255)
aaGTTAATCGGCGCCGTTGCAATTCCCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGc < 2:5569818/93‑1 (MQ=255)
aaTCAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCAttt < 1:359624/93‑1 (MQ=255)
tCAGCGCCGTTGCCATTACCAGGCCGAAGTTCATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCg < 2:3114789/93‑1 (MQ=255)
cAGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCgg < 2:1599721/93‑1 (MQ=255)
aGCGCCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCggg > 1:5085224/1‑93 (MQ=255)
gcgcCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGgt > 1:6023491/1‑93 (MQ=255)
cgcCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGgtg < 2:1555402/93‑1 (MQ=255)
gcCGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGgtgt > 2:3267505/1‑93 (MQ=255)
cggtGCCATTCCCGGGCGGAAGTTGATTGCCGGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTAc < 1:1147469/90‑1 (MQ=255)
cGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTAc > 2:1348600/1‑93 (MQ=255)
cGTTGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTAc > 1:2770853/1‑93 (MQ=255)
ttGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACAt > 2:2232578/1‑93 (MQ=255)
tGCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATa < 1:1075289/93‑1 (MQ=255)
gCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATaa < 1:1712618/93‑1 (MQ=255)
gCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATaa < 2:6328147/93‑1 (MQ=255)
gCCATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATaa > 1:4756863/1‑93 (MQ=255)
ccATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAc < 2:5802729/93‑1 (MQ=255)
ccATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAc > 2:5591034/1‑93 (MQ=255)
ccATTACCAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAc > 1:6434875/1‑93 (MQ=255)
tcccAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCgaa < 2:3539528/91‑1 (MQ=255)
ccAGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCgaaga < 1:4259645/93‑1 (MQ=255)
aGGCCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGaagaag < 1:1291305/93‑1 (MQ=255)
|
GGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAGTTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAG > NC_000913/2083935‑2084113
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACGGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAGCTTT > NC_000913/2083932‑2084117
|
CACGGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCC < SRR4302537.4173155/94‑1 (MQ=60)
CACGGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCC > SRR4302537.2543752/1‑94 (MQ=60)
CGGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGA > SRR4302537.3257772/1‑94 (MQ=60)
GGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAA > SRR4302537.6325541/1‑94 (MQ=60)
GGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAA < SRR4302537.6366879/94‑1 (MQ=60)
GGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAA > SRR4302537.1458182/1‑94 (MQ=60)
GATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAG > SRR4302537.3694263/1‑94 (MQ=60)
GATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG < SRR4302537.5095055/94‑1 (MQ=60)
GATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG > SRR4302537.3652343/1‑94 (MQ=60)
GATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG < SRR4302537.4821604/94‑1 (MQ=60)
ATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑T > SRR4302537.3214737/1‑94 (MQ=60)
TCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TT > SRR4302537.1542342/1‑94 (MQ=60)
TCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TT > SRR4302537.471138/1‑94 (MQ=60)
AGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGTCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGAT < SRR4302537.3667672/94‑1 (MQ=60)
AGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGAT < SRR4302537.5313723/94‑1 (MQ=60)
GAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATT < SRR4302537.2487156/94‑1 (MQ=60)
GAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATT > SRR4302537.3104023/1‑94 (MQ=60)
AACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTG > SRR4302537.3386154/1‑94 (MQ=60)
AACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTG > SRR4302537.4943877/1‑94 (MQ=60)
AACTGCGAGATAACCGACAGGTTAACGAAAGTGAACGCCGCCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTG < SRR4302537.5826956/94‑1 (MQ=60)
TGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCA > SRR4302537.2032346/1‑94 (MQ=60)
GCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAG < SRR4302537.5803585/94‑1 (MQ=60)
GCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAG < SRR4302537.2416794/94‑1 (MQ=60)
GAGATGACCGACAGGTTAACGAAAGTGGACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCA > SRR4302537.2961097/1‑94 (MQ=60)
AGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAG > SRR4302537.6057393/1‑94 (MQ=60)
GATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGG < SRR4302537.3565574/94‑1 (MQ=60)
ACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAA > SRR4302537.1377511/1‑94 (MQ=60)
CCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAAT > SRR4302537.6479265/1‑94 (MQ=60)
CGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATC > SRR4302537.3536840/1‑94 (MQ=60)
GACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCG < SRR4302537.1475713/94‑1 (MQ=60)
ACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGC > SRR4302537.4918964/1‑94 (MQ=60)
CAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCG < SRR4302537.2491185/94‑1 (MQ=60)
AGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGC > SRR4302537.4545356/1‑94 (MQ=60)
AGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGC > SRR4302537.2063444/1‑94 (MQ=60)
AGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGC < SRR4302537.6382308/94‑1 (MQ=60)
GGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCTGAAG‑TTGATTGCCAGCAGGGCAATCGCGCC < SRR4302537.752922/94‑1 (MQ=60)
GTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCA > SRR4302537.4307958/1‑94 (MQ=60)
GTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCA > SRR4302537.1219781/1‑94 (MQ=60)
GTGAACGAAAGTGAACCCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTAATTGCCAGCAGGGCAATCGCGCCA < SRR4302537.5093731/94‑1 (MQ=60)
TTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAA > SRR4302537.3452980/1‑94 (MQ=60)
AACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACC < SRR4302537.4294673/94‑1 (MQ=60)
AACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACA > SRR4302537.3269655/1‑94 (MQ=60)
ACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCA < SRR4302537.1804851/94‑1 (MQ=60)
GAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGG > SRR4302537.2943531/1‑94 (MQ=60)
GAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGG > SRR4302537.1538787/1‑94 (MQ=60)
AAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGA > SRR4302537.2276482/1‑94 (MQ=60)
AAGTGAACGCCGCCAGCCCACCAAAGTTAATCACCCCCGTTGCCATTCCCAGGCCGAAG‑TTGATTCCCAGCAGGGCAATCGCGCCAACCAGGAT < SRR4302537.1445225/94‑1 (MQ=60)
AAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGAT > SRR4302537.4122666/1‑94 (MQ=60)
AAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGAT > SRR4302537.6454616/1‑94 (MQ=60)
AACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGT < SRR4302537.6197982/94‑1 (MQ=60)
CGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTC < SRR4302537.2887823/94‑1 (MQ=60)
CGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTC > SRR4302537.3656230/1‑94 (MQ=60)
CCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAT > SRR4302537.6043457/1‑94 (MQ=60)
CCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAT > SRR4302537.822519/1‑94 (MQ=60)
CCACCAGCGCACAAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCAT < SRR4302537.4588888/94‑1 (MQ=60)
CACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATC > SRR4302537.3188208/1‑94 (MQ=60)
CACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATC > SRR4302537.5160275/1‑94 (MQ=60)
CACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATC > SRR4302537.5546645/1‑94 (MQ=60)
CACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATC > SRR4302537.1680496/1‑94 (MQ=60)
ccaAGCGCAACAAAGTTAATCAGCGCAGTTGCCATTACAAGGCCGAAG‑TTGATTGCCAGCAGGAAAATCGCGCCAACCAGGATGATGTTCATCG < SRR4302537.1397598/91‑1 (MQ=60)
ACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCG > SRR4302537.900109/1‑94 (MQ=60)
ACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCG > SRR4302537.1621404/1‑94 (MQ=60)
CCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGC > SRR4302537.1983737/1‑94 (MQ=60)
AGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCG < SRR4302537.5123439/94‑1 (MQ=60)
GCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGG < SRR4302537.2981297/94‑1 (MQ=60)
CGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGA > SRR4302537.5048350/1‑94 (MQ=60)
GCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAG < SRR4302537.1814549/94‑1 (MQ=60)
GCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAG < SRR4302537.5683184/94‑1 (MQ=60)
CCACCAAAGTTAATCAGCTCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAG < SRR4302537.552007/94‑1 (MQ=60)
CACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGT > SRR4302537.1757267/1‑94 (MQ=60)
ACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTA > SRR4302537.2424730/1‑94 (MQ=60)
CCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGGGTAC > SRR4302537.3638514/1‑94 (MQ=60)
CCAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTAC < SRR4302537.6066048/94‑1 (MQ=60)
CCAAAGTTAAGCAGCGCCGTTGCCATTACCGGGCCGAAG‑TTGATTGCCAGCGGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTAC < SRR4302537.3628793/94‑1 (MQ=60)
caaggtaagTCAGCGCCGTTGCCATTCCCA‑GTCCAAGTTTGATTGCCAGCGGAGCAACCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG < SRR4302537.3839215/85‑1 (MQ=48)
CAAAGTTAATCAGCGCCTTTGCCATTACCAGGCCAAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG < SRR4302537.4845239/94‑1 (MQ=60)
CAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG < SRR4302537.6191180/94‑1 (MQ=60)
CAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG > SRR4302537.2219269/1‑94 (MQ=60)
CAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG > SRR4302537.2977913/1‑94 (MQ=60)
CAAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACG > SRR4302537.5193118/1‑94 (MQ=60)
AAAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGC > SRR4302537.719717/1‑94 (MQ=60)
AAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGGCAACCAGGATGATGTTCATCGCCGGAGTACCCC > SRR4302537.59012/1‑94 (MQ=60)
AAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCC > SRR4302537.425307/1‑94 (MQ=60)
AAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCC < SRR4302537.1277434/94‑1 (MQ=60)
AAGTTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCC < SRR4302537.5387333/94‑1 (MQ=60)
TTAATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATT < SRR4302537.3850865/94‑1 (MQ=60)
AATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTC < SRR4302537.362122/94‑1 (MQ=60)
ATCAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCG > SRR4302537.1373889/1‑94 (MQ=60)
CAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGG > SRR4302537.5120222/1‑94 (MQ=60)
CAGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGG > SRR4302537.797034/1‑94 (MQ=60)
AGCGCCGTTGCCATTACCAGGTCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGT > SRR4302537.3176694/1‑94 (MQ=60)
AGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGTATGATGTTCATCGCCGGAGTACGCCATTTCGGGT < SRR4302537.5743658/94‑1 (MQ=60)
AGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGT < SRR4302537.1102418/94‑1 (MQ=60)
AGCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGT > SRR4302537.6064878/1‑94 (MQ=60)
GCGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTG < SRR4302537.6286608/94‑1 (MQ=60)
CGCCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGT > SRR4302537.898533/1‑94 (MQ=60)
CCGTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTAC > SRR4302537.2790214/1‑94 (MQ=60)
GTTGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACAT < SRR4302537.2902462/94‑1 (MQ=60)
TGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAA < SRR4302537.1082697/94‑1 (MQ=60)
TGCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAA > SRR4302537.4789723/1‑94 (MQ=60)
GCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAC < SRR4302537.1724578/94‑1 (MQ=60)
GCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAC < SRR4302537.225696/94‑1 (MQ=60)
GCCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAAC > SRR4302537.6478570/1‑94 (MQ=60)
CCATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACC > SRR4302537.4627012/1‑94 (MQ=60)
CCATTACCAGGCAGAAG‑TTGATTCCCGGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACC < SRR4302537.5492575/94‑1 (MQ=60)
ATTACCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGA < SRR4302537.1215155/94‑1 (MQ=60)
CCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAA < SRR4302537.2422562/94‑1 (MQ=60)
CCAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAA < SRR4302537.4289247/94‑1 (MQ=60)
CAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAG < SRR4302537.1616672/94‑1 (MQ=60)
CAGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAG > SRR4302537.2632444/1‑94 (MQ=60)
AGGCCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAGC < SRR4302537.1300283/94‑1 (MQ=60)
CCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAGCTTT < SRR4302537.6084943/94‑1 (MQ=60)
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CACGGATCCAGAACTGCGAGATGACCGACAGGTTAACGAAAGTGAACGCCACCAGCGCACCAAAGTTAATCAGCGCCGTTGCCATTACCAGGTCGAAG‑TTGATTGCCAGCAGGGCAATCGCGCCAACCAGGATGATGTTCATCGCCGGAGTACGCCATTTCGGGTGTACATAACCGAAGAAGCTTT > NC_000913/2083932‑2084117
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
