Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,084,512 |
A→G |
R193R (CGT→CGC) |
yeeF ← |
putative amino acid/amine transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,084,512 | 0 | A | G | 99.1%
| 730.3
/ ‑3.0
| 219 | R193R (CGT→CGC) | yeeF | putative amino acid/amine transport protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (99/118); total (101/118) |
| Fisher's exact test for biased strand distribution p-value = 2.12e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01 |
Only 100 of 230 total aligned reads displayed.
GCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAAC > NC_000913/2084422‑2084602
|
cTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAg > 2:3333351/1‑94 (MQ=255)
tGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGTGCGAgg > 2:1717256/1‑93 (MQ=255)
tGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGt > 2:5458464/1‑94 (MQ=255)
tGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGt < 2:5184581/94‑1 (MQ=255)
gATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTg < 1:1982445/94‑1 (MQ=255)
gCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTc > 2:2099261/1‑94 (MQ=255)
ccGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCg < 1:4605729/94‑1 (MQ=255)
gTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGcc > 2:8146245/1‑94 (MQ=255)
tCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGcga > 2:5892579/1‑92 (MQ=255)
cAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGTGCGAGTGCTCGCCAg > 2:2670684/1‑94 (MQ=255)
aaaGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGc > 2:3641141/1‑94 (MQ=255)
gCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTa > 2:4751538/1‑94 (MQ=255)
ccGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTAc > 2:6710888/1‑94 (MQ=255)
cGGTAAAGGAGAAGCACAGGACTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTAcc > 1:6899535/1‑94 (MQ=255)
ggTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCa > 2:6690473/1‑94 (MQ=255)
ggTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCa < 2:9249075/94‑1 (MQ=255)
ggTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCa < 2:2555231/94‑1 (MQ=255)
ggTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCa > 2:7309989/1‑94 (MQ=255)
aaaGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAgcg > 1:3365729/1‑94 (MQ=255)
aaaGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAgcg > 2:6104024/1‑94 (MQ=255)
aGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGcc < 1:6645526/94‑1 (MQ=255)
aGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGcc > 1:4013212/1‑94 (MQ=255)
ggAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGcct < 1:4291340/94‑1 (MQ=255)
gagaAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGcctt > 2:2258223/1‑94 (MQ=255)
agaAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttc < 1:8993232/94‑1 (MQ=255)
agaAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttc < 2:4546798/94‑1 (MQ=255)
aaGCACAGGATTGTCGCCCCTGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcac < 2:10499957/94‑1 (MQ=255)
aGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcacc < 1:6926262/94‑1 (MQ=255)
cacaGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcacctt < 1:3930834/94‑1 (MQ=255)
cacaGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcacctt < 1:3884412/94‑1 (MQ=255)
cacaGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcacctt < 1:9761746/94‑1 (MQ=255)
acaGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcaccttc > 2:9032478/1‑94 (MQ=255)
acaGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcaccttc < 2:10185939/94‑1 (MQ=255)
caGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGccttcaccttca > 2:5738722/1‑94 (MQ=255)
aGGATTGTCTCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCaa < 1:1627133/94‑1 (MQ=255)
aGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCaa < 1:10017438/94‑1 (MQ=255)
ggATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCaaa < 1:8557468/94‑1 (MQ=255)
ggATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCaaa < 1:5498673/94‑1 (MQ=255)
gATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAAt < 1:6020745/94‑1 (MQ=255)
gATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAAt < 2:6595540/94‑1 (MQ=255)
gATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAAt < 2:8056389/94‑1 (MQ=255)
gATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAAt < 2:9809440/94‑1 (MQ=255)
aTTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATa > 2:9478237/1‑94 (MQ=255)
ttGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATAc > 1:3561910/1‑94 (MQ=255)
tGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACg < 2:5306852/94‑1 (MQ=255)
gTCCCCCCGGGAATCATCGGGATAACATGCGGATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCACCGCCTTCACCTTCACATACGc > 1:10508212/1‑94 (MQ=255)
cGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCa > 2:6244723/1‑94 (MQ=255)
gCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCAt < 1:6387534/94‑1 (MQ=255)
gCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCAt > 1:3177852/1‑94 (MQ=255)
cccGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATaa < 2:10439660/94‑1 (MQ=255)
cccGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCACaa < 1:7357250/94‑1 (MQ=255)
ccGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATaaa > 1:8111718/1‑94 (MQ=255)
cGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAaac > 2:1859542/1‑94 (MQ=255)
ggTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAaaca > 1:8367924/1‑94 (MQ=255)
atcatcGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACGACCa > 2:7841778/1‑94 (MQ=255)
atcatcGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCa < 1:2827699/94‑1 (MQ=255)
tcatcGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCAt < 2:5243680/94‑1 (MQ=255)
catcGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCAtc > 1:5722190/1‑93 (MQ=255)
tcGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGcc < 2:7284698/94‑1 (MQ=255)
cGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGccc < 2:6995010/94‑1 (MQ=255)
cGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGccc < 1:7311006/94‑1 (MQ=255)
cGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGccc > 2:9280885/1‑94 (MQ=255)
gggATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCa < 2:5396111/94‑1 (MQ=255)
gggATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCa > 2:150261/1‑94 (MQ=255)
gggATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCa < 2:10548478/94‑1 (MQ=255)
gggATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCa < 1:9338923/94‑1 (MQ=255)
ggATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAg > 2:9511171/1‑94 (MQ=255)
aTAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGaa < 2:755883/94‑1 (MQ=255)
aTAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGaa > 1:2164520/1‑94 (MQ=255)
tAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTTCCAGCGCCTTCACCTTCAAATACGCCATAAGCAACCATGCCCAGAAt < 1:9818211/94‑1 (MQ=255)
tAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAAt < 1:6607714/94‑1 (MQ=255)
tAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCACAGAAt > 1:1710124/1‑94 (MQ=255)
aaCATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAAta > 1:9560465/1‑93 (MQ=255)
aCATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCa < 2:6844122/94‑1 (MQ=255)
cATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAc > 1:5106866/1‑94 (MQ=255)
aaTGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAc < 1:9133176/93‑1 (MQ=255)
aTGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAcc < 2:4454001/94‑1 (MQ=255)
aTGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAcc < 2:4001716/94‑1 (MQ=255)
tGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACcg < 2:10123126/94‑1 (MQ=255)
tGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACcg < 1:8858385/94‑1 (MQ=255)
gcATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGa > 2:8343794/1‑94 (MQ=255)
gcATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGa < 1:4967549/94‑1 (MQ=255)
aTCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATGACCGCGATc > 1:3559529/1‑94 (MQ=255)
aTCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATc > 2:8636010/1‑94 (MQ=255)
tCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCa > 2:1683298/1‑94 (MQ=255)
gCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGc < 1:5581512/94‑1 (MQ=255)
ccagaccagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCa < 1:3784563/94‑1 (MQ=255)
agaccagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACt > 1:1073726/1‑94 (MQ=255)
gaccagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTa > 2:2370217/1‑94 (MQ=255)
accagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAc < 2:5576008/94‑1 (MQ=255)
accagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAc > 1:2269205/1‑94 (MQ=255)
accagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAc > 1:9962709/1‑94 (MQ=255)
accagaATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAc > 1:5032940/1‑94 (MQ=255)
cagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCt < 1:2449676/94‑1 (MQ=255)
cagaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCt < 2:2439901/94‑1 (MQ=255)
agaATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTg > 2:405111/1‑94 (MQ=255)
aaTGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCa < 2:2932735/94‑1 (MQ=255)
aTGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCaa > 2:1983496/1‑94 (MQ=255)
aTGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCaa < 2:7856826/94‑1 (MQ=255)
tGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAac < 2:4101846/94‑1 (MQ=255)
|
GCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAAC > NC_000913/2084422‑2084602
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACACG > NC_000913/2084420‑2084605
|
TTGCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGC < SRR4302545.1813598/94‑1 (MQ=60)
GCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGA < SRR4302545.5159794/94‑1 (MQ=60)
CTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAG > SRR4302545.7091280/1‑94 (MQ=60)
TGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGT < SRR4302545.3337993/94‑1 (MQ=60)
GATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTG > SRR4302545.9956531/1‑94 (MQ=60)
GATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTG < SRR4302545.2031540/94‑1 (MQ=60)
ATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGC < SRR4302545.10200407/94‑1 (MQ=60)
GCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTC < SRR4302545.2412115/94‑1 (MQ=60)
CCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCG < SRR4302545.4723595/94‑1 (MQ=60)
GTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCC < SRR4302545.8966850/94‑1 (MQ=60)
GTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGCGCGAGTGCTCGCC > SRR4302545.3742539/1‑94 (MQ=60)
TCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCA < SRR4302545.4191344/94‑1 (MQ=60)
CAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAG > SRR4302545.9430689/1‑94 (MQ=60)
AAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCG > SRR4302545.409085/1‑94 (MQ=60)
AAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCG > SRR4302545.4074494/1‑94 (MQ=60)
CGGTAAAGGAGAAGCACAGGACTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACC > SRR4302545.7089528/1‑94 (MQ=60)
GGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCA > SRR4302545.7961517/1‑94 (MQ=60)
GTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAG < SRR4302545.9304336/94‑1 (MQ=60)
TAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGC < SRR4302545.2557833/94‑1 (MQ=60)
AAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCG > SRR4302545.3447814/1‑94 (MQ=60)
AAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCG > SRR4302545.5548740/1‑94 (MQ=60)
AGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCC > SRR4302545.4113611/1‑94 (MQ=60)
AGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCC < SRR4302545.6827753/94‑1 (MQ=60)
AGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCC > SRR4302545.1721069/1‑94 (MQ=60)
GGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCT > SRR4302545.3007044/1‑94 (MQ=60)
GGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCT < SRR4302545.4399280/94‑1 (MQ=60)
AGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCT < SRR4302545.9404196/94‑1 (MQ=60)
GAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTT > SRR4302545.6050383/1‑94 (MQ=60)
AGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTC < SRR4302545.9254750/94‑1 (MQ=60)
AGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTC > SRR4302545.2155973/1‑94 (MQ=60)
AGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTC < SRR4302545.9255069/94‑1 (MQ=60)
GAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCA > SRR4302545.4446190/1‑94 (MQ=60)
AGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACC > SRR4302545.6974629/1‑94 (MQ=60)
AGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACC < SRR4302545.7117131/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.6795699/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.10052135/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.4028978/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.3981379/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.3716060/94‑1 (MQ=60)
CACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTT < SRR4302545.10052134/94‑1 (MQ=60)
ACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTC > SRR4302545.3458409/1‑94 (MQ=60)
ACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTC < SRR4302545.5656909/94‑1 (MQ=60)
ACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTA > SRR4302545.8419251/1‑94 (MQ=60)
AGGATTGTCTCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAA < SRR4302545.1665768/94‑1 (MQ=60)
AGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAA > SRR4302545.9760147/1‑94 (MQ=60)
AGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAA < SRR4302545.10314351/94‑1 (MQ=60)
GGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAA < SRR4302545.8804879/94‑1 (MQ=60)
GGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAA < SRR4302545.5643477/94‑1 (MQ=60)
GATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAAT < SRR4302545.6183318/94‑1 (MQ=60)
TTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATAC > SRR4302545.3648970/1‑94 (MQ=60)
TTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATAC < SRR4302545.2219366/94‑1 (MQ=60)
TTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATAC > SRR4302545.3648971/1‑94 (MQ=60)
TGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGGACCAGCGCCTTCACCTTCAAATACG > SRR4302545.5692480/1‑94 (MQ=60)
GTCCCCCCGGGAATCATCGGGATAACATGCGGATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCACCGCCTTCACCTTCACATACGC > SRR4302545.10817907/1‑94 (MQ=60)
TCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCC < SRR4302545.7007971/94‑1 (MQ=60)
GCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCAT < SRR4302545.6562183/94‑1 (MQ=60)
GCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCAT > SRR4302545.1031021/1‑94 (MQ=60)
GCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCAT > SRR4302545.3255838/1‑94 (MQ=60)
cactGGTAATCATCGGGATAGCATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATA < SRR4302545.6452520/90‑1 (MQ=60)
CCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAA < SRR4302545.3905496/94‑1 (MQ=60)
CCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCACAA < SRR4302545.7564181/94‑1 (MQ=60)
CCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAA > SRR4302545.8345726/1‑94 (MQ=60)
CGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAAC > SRR4302545.10931957/1‑94 (MQ=60)
GGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACA > SRR4302545.8610264/1‑94 (MQ=60)
ATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCA < SRR4302545.2896118/94‑1 (MQ=60)
ATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCA > SRR4302545.4940927/1‑94 (MQ=60)
TCATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCAT > SRR4302545.1744163/1‑94 (MQ=60)
TCATCGGGATAACATGCGCATCACCAGACCAGAATGGGCGAGTTCTGGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCAT < SRR4302545.7897383/94‑1 (MQ=60)
CATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATG > SRR4302545.580244/1‑94 (MQ=60)
CATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATC > SRR4302545.5875702/1‑94 (MQ=60)
CATCGAGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGTCTTCACCTTCAAATACGCCATAAACAACCATG < SRR4302545.5370217/94‑1 (MQ=60)
ATCGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGC > SRR4302545.3153141/1‑94 (MQ=60)
CGGTATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCC < SRR4302545.7516017/94‑1 (MQ=60)
CGGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCC < SRR4302545.7516016/94‑1 (MQ=60)
GGGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCA < SRR4302545.9612733/94‑1 (MQ=60)
GGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAG < SRR4302545.10205145/94‑1 (MQ=60)
GGATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAG > SRR4302545.8119692/1‑94 (MQ=60)
GATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGA < SRR4302545.7404567/94‑1 (MQ=60)
ATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCTCAGAA > SRR4302545.6387296/1‑94 (MQ=60)
ATAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAA > SRR4302545.2217452/1‑94 (MQ=60)
TAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTTCCAGCGCCTTCACCTTCAAATACGCCATAAGCAACCATGCCCAGAAT < SRR4302545.10109926/94‑1 (MQ=60)
TAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAAT < SRR4302545.6788673/94‑1 (MQ=60)
TAACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCACAGAAT > SRR4302545.1750820/1‑94 (MQ=60)
AACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATA > SRR4302545.9842247/1‑94 (MQ=60)
ACATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCA < SRR4302545.6627495/94‑1 (MQ=60)
CATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAC > SRR4302545.5237433/1‑94 (MQ=60)
AATGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCAC < SRR4302545.9401390/94‑1 (MQ=60)
TGCGCATCGCCAGACCAGAATGTGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACAG > SRR4302545.1159992/1‑94 (MQ=60)
TGCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCG < SRR4302545.9115709/94‑1 (MQ=60)
CGCGCAGCGCCAGACCAAAATGGGCGAGTGCTCGCCAGCGTCCCAGCGCGTTCACTTTCAAATCCGCCATAAACAACCATGCCCAGAATCACCG < SRR4302545.1449016/94‑1 (MQ=60)
GCGCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGC > SRR4302545.520999/1‑94 (MQ=60)
GCATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGA < SRR4302545.5093368/94‑1 (MQ=60)
ATCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATGACCGCGATC > SRR4302545.3646541/1‑94 (MQ=60)
TCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCA > SRR4302545.2237012/1‑94 (MQ=60)
TCGCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCA < SRR4302545.4990948/94‑1 (MQ=60)
CGCCAGACCAGAATGGGCGAGTGCTCGCCAACGTACCAGCACCTTCACCTTCAAATACGCCATAAACAACCATTCCCAGAATCACCGCGATCAA > SRR4302545.8818654/1‑94 (MQ=60)
GCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGC < SRR4302545.5729312/94‑1 (MQ=60)
GCCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGC < SRR4302545.8731765/94‑1 (MQ=60)
CCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCA < SRR4302545.3878251/94‑1 (MQ=60)
CCAGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCA > SRR4302545.3982318/1‑94 (MQ=60)
AGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACT > SRR4302545.1097042/1‑94 (MQ=60)
AGACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACT > SRR4302545.1882350/1‑94 (MQ=60)
ACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAC > SRR4302545.10258271/1‑94 (MQ=60)
ACCAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAC > SRR4302545.2324388/1‑94 (MQ=60)
ACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTAC > SRR4302545.5160559/1‑94 (MQ=60)
CAGAATGGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCT < SRR4302545.2509026/94‑1 (MQ=60)
GGGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACA < SRR4302545.4959504/94‑1 (MQ=60)
GGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACTATGCCCAGAATCACCGCGATCAGCACTACCTGCAACAC < SRR4302545.4328246/94‑1 (MQ=60)
GGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACAC < SRR4302545.7069121/94‑1 (MQ=60)
GGCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACAC < SRR4302545.6498368/94‑1 (MQ=60)
GCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACACG > SRR4302545.3563139/1‑94 (MQ=60)
GCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACACG < SRR4302545.4551079/94‑1 (MQ=60)
GCGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACACA > SRR4302545.3563138/1‑94 (MQ=60)
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TTGCTGATGCCGTCAAAGCCGGTAAAGGAGAAGCACAGGATTGTCGCCCCGGTAATCATCGGGATAACATGCGCATCGCCAGACCAGAATGGACGAGTGCTCGCCAGCGTACCAGCGCCTTCACCTTCAAATACGCCATAAACAACCATGCCCAGAATCACCGCGATCAGCACTACCTGCAACACG > NC_000913/2084420‑2084605
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
