Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,263,219 |
A→G |
intergenic (+155/‑251) |
yeiO → / → b2171 |
putative transport/putative elongation factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,263,219 | 0 | A | G | 95.7%
| 586.2
/ 11.5
| 185 | intergenic (+155/‑251) | yeiO/b2171 | putative transport/putative elongation factor |
| Reads supporting (aligned to +/- strand): ref base A (2/6); new base G (95/82); total (97/88) |
| Fisher's exact test for biased strand distribution p-value = 1.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01 |
Only 100 of 200 total aligned reads displayed.
TTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGC > NC_000913/2263129‑2263308
|
tttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCggg < 1:1381987/93‑1 (MQ=255)
tttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCggg > 2:6301987/1‑93 (MQ=255)
ttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCgggg < 2:2846600/93‑1 (MQ=255)
ttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCgggg < 1:2912792/93‑1 (MQ=255)
ttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCgggg < 2:5667203/93‑1 (MQ=255)
ttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCgggg < 1:2063968/93‑1 (MQ=255)
aGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGt > 2:5273139/1‑93 (MQ=255)
gcgcTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTa > 1:5609790/1‑93 (MQ=255)
gcgcTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTa < 2:276547/93‑1 (MQ=255)
gcgcTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTa > 2:4765444/1‑93 (MQ=255)
cgcTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTAt < 2:192280/93‑1 (MQ=255)
gcTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTAtt > 1:1065652/1‑93 (MQ=255)
cTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTg > 2:1315411/1‑93 (MQ=255)
tGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTgg < 2:542937/93‑1 (MQ=255)
tGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTgg < 1:6204590/93‑1 (MQ=255)
tGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTgg > 1:1604274/1‑93 (MQ=255)
tGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTgg > 1:2548093/1‑93 (MQ=255)
ggCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGc < 2:1524463/93‑1 (MQ=255)
ggCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGCGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCCTAtttgg > 2:1484699/1‑90 (MQ=255)
cTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCgg > 1:4101893/1‑93 (MQ=255)
tGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCggg < 1:3037444/92‑1 (MQ=255)
tGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGc > 1:5032547/1‑93 (MQ=255)
tGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGc > 1:541365/1‑93 (MQ=255)
gTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCt > 2:2193775/1‑93 (MQ=255)
gTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCt < 1:476970/93‑1 (MQ=255)
aGCCTGCGCAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGc < 2:3832683/93‑1 (MQ=255)
aGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGGTTGc > 2:3592259/1‑93 (MQ=255)
gCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGcc > 1:605846/1‑93 (MQ=255)
ccTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCtttgcc > 1:29056/1‑89 (MQ=255)
ccTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCa < 2:426988/93‑1 (MQ=255)
cTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCAt < 2:4996988/93‑1 (MQ=255)
cTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCAt < 2:1776532/93‑1 (MQ=255)
tGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATc > 1:5941194/1‑93 (MQ=255)
gCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCt < 1:4575865/93‑1 (MQ=255)
gCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCt < 1:4097362/93‑1 (MQ=255)
cacaGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTg > 2:5964954/1‑93 (MQ=255)
acaGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTgg < 1:3893946/93‑1 (MQ=255)
caGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGc < 1:6022677/93‑1 (MQ=255)
aGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCa > 2:6466729/1‑93 (MQ=255)
tCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCgg < 2:993763/93‑1 (MQ=255)
gTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCCGGaa > 1:6160639/1‑93 (MQ=255)
tCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATAACGGGGAt > 2:3979046/1‑93 (MQ=255)
gCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAg > 2:948107/1‑93 (MQ=255)
cAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAgg < 1:3046005/93‑1 (MQ=255)
aGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGTCCTGCCCTCTGGGATACCGGGCATAggg > 1:5747770/1‑93 (MQ=255)
aGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAggg < 2:1825985/93‑1 (MQ=255)
aGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAggg < 1:3765820/93‑1 (MQ=255)
gTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGc < 1:750187/93‑1 (MQ=255)
gCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTgg < 2:3489390/93‑1 (MQ=255)
aGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGaaa > 1:3929033/1‑93 (MQ=255)
ggTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAAt > 2:3634621/1‑93 (MQ=255)
gAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGTGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGa < 2:5793294/93‑1 (MQ=255)
aaaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAg < 2:1207388/93‑1 (MQ=255)
aaaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAg < 2:16156/93‑1 (MQ=255)
aaaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAg > 2:4589451/1‑93 (MQ=255)
aaaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAg < 1:4298774/93‑1 (MQ=255)
aaaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAg < 1:2329266/93‑1 (MQ=255)
aaTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAgg < 1:2229132/93‑1 (MQ=255)
aTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAggg < 1:5265070/93‑1 (MQ=255)
aTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAggg < 1:1500569/93‑1 (MQ=255)
ttttACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGGAATTGAAgggg > 1:2403205/1‑93 (MQ=255)
ttttACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAaggg > 1:352904/1‑93 (MQ=255)
ttttACAGCGTTGCTGTTCATCAAGATGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAgggg < 1:4833209/93‑1 (MQ=255)
tttACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGc < 1:1970278/93‑1 (MQ=255)
tttACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGc > 1:2628059/1‑93 (MQ=255)
tttACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGc < 2:2603500/93‑1 (MQ=255)
ttACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCa < 2:2410332/93‑1 (MQ=255)
cAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTg < 1:1108194/93‑1 (MQ=255)
gCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCa > 2:3737941/1‑93 (MQ=255)
gCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGGAGTGCa > 2:4856557/1‑93 (MQ=255)
gCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCa > 1:1239861/1‑93 (MQ=255)
gTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCAac > 2:4666391/1‑93 (MQ=255)
gTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAac > 1:3223942/1‑93 (MQ=255)
ttGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGGAATTGAAGGGGCAGTGCAaca > 2:885197/1‑93 (MQ=255)
ttGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGGGCAaca > 1:2873327/1‑93 (MQ=255)
gCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGTCATCTGGCCTACCCGGGATAGGGCTGGAAATTTGAGGGGCAGAGCAaaacc > 2:5932532/1‑92 (MQ=255)
tGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGcc < 1:345792/93‑1 (MQ=255)
tGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGcc > 1:3281507/1‑93 (MQ=255)
gTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGccc < 1:2688852/93‑1 (MQ=255)
gTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGccc > 2:4401138/1‑93 (MQ=255)
tcatcaAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCg < 2:503635/93‑1 (MQ=255)
catcaAGCTGAATGCGGGGCGTATTGGCGGGGTTGCCATCGGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGc < 1:5090787/93‑1 (MQ=255)
catcaAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGc < 2:3785798/93‑1 (MQ=255)
caAGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAc < 2:3245648/93‑1 (MQ=255)
caAGCTGAAGGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAc < 2:7219/93‑1 (MQ=255)
aaGCTGAATGCGGGGCGTCTTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAcc < 1:1917042/93‑1 (MQ=255)
aGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAccc < 2:661456/93‑1 (MQ=255)
aGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAccc < 2:3179827/93‑1 (MQ=255)
aGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAccc < 2:6087476/93‑1 (MQ=255)
aGCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAccc > 2:6174325/1‑93 (MQ=255)
gCTGAATGCGGGGCGTTTGGGCGGCCTTGCCATCTGGCATCCGGGAAATGGGGCTGAAATTGGAAGGGGCAGTGCAACACGCCCCGCAACCCg < 2:117681/93‑1 (MQ=255)
gCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCg < 2:557693/93‑1 (MQ=255)
gCTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGGGCAACACGCCCCGCAACCCg > 2:164542/1‑93 (MQ=255)
cTGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCgg > 2:815483/1‑93 (MQ=255)
tGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGa < 1:422944/93‑1 (MQ=255)
tGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGa > 2:5992670/1‑93 (MQ=255)
tGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGa < 2:3033095/93‑1 (MQ=255)
tGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGa < 1:2105706/93‑1 (MQ=255)
tGAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGa < 2:4058181/93‑1 (MQ=255)
gAATGCGGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGAc < 2:4964120/93‑1 (MQ=255)
|
TTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGC > NC_000913/2263129‑2263308
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTC > NC_000913/2263126‑2263312
|
ACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCG < SRR4302537.280109/94‑1 (MQ=60)
ACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCG < SRR4302537.4127219/94‑1 (MQ=60)
CATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGG > SRR4302537.2625218/1‑94 (MQ=60)
ATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGG < SRR4302537.2274162/94‑1 (MQ=60)
ATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGG < SRR4302537.5512189/94‑1 (MQ=60)
ATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGG > SRR4302537.4751875/1‑94 (MQ=60)
TTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGG < SRR4302537.1391630/94‑1 (MQ=60)
TTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGC < SRR4302537.5091978/94‑1 (MQ=60)
TTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGC < SRR4302537.281189/94‑1 (MQ=60)
TTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGC < SRR4302537.2078460/94‑1 (MQ=60)
TTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGC < SRR4302537.2933252/94‑1 (MQ=60)
CAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGT < SRR4302537.1569580/94‑1 (MQ=60)
AGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTA > SRR4302537.5648144/1‑94 (MQ=60)
CGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATT > SRR4302537.1072992/1‑94 (MQ=60)
CTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGG > SRR4302537.1615494/1‑94 (MQ=60)
CTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGG > SRR4302537.2565942/1‑94 (MQ=60)
TGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGC < SRR4302537.6247351/94‑1 (MQ=60)
GGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCG < SRR4302537.5941748/94‑1 (MQ=60)
GCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGG > SRR4302537.4130534/1‑94 (MQ=60)
CTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGG > SRR4302537.2915288/1‑94 (MQ=60)
CTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGG > SRR4302537.3182001/1‑94 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC > SRR4302537.3935309/1‑94 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC < SRR4302537.3058612/94‑1 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC > SRR4302537.2077676/1‑94 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC < SRR4302537.1503711/94‑1 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC > SRR4302537.5067194/1‑94 (MQ=60)
TTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC > SRR4302537.545096/1‑94 (MQ=60)
GTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TT < SRR4302537.480227/94‑1 (MQ=60)
AGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCC > SRR4302537.609986/1‑94 (MQ=60)
GCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGT‑TTGCCA > SRR4302537.1088575/1‑94 (MQ=60)
GCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGCTTTGCC > SRR4302537.29289/1‑94 (MQ=60)
GCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCA > SRR4302537.2647723/1‑94 (MQ=60)
GCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCA < SRR4302537.1932440/94‑1 (MQ=60)
CCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCAT > SRR4302537.1366180/1‑94 (MQ=60)
CTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATC > SRR4302537.5981971/1‑94 (MQ=60)
TGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGG‑TTGCCCTCT > SRR4302537.5442079/1‑94 (MQ=60)
GCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGG‑CTGCCATCTG > SRR4302537.6182134/1‑94 (MQ=60)
GCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTG > SRR4302537.3909579/1‑94 (MQ=60)
GCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTG < SRR4302537.4607534/94‑1 (MQ=60)
GCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGC‑TTGCCATCTG < SRR4302537.4125969/94‑1 (MQ=60)
GCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGATCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTG < SRR4302537.3494798/94‑1 (MQ=60)
ACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGC < SRR4302537.3921169/94‑1 (MQ=60)
CAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCA < SRR4302537.3065631/94‑1 (MQ=60)
CAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCA < SRR4302537.2928718/94‑1 (MQ=60)
CAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCA < SRR4302537.6064056/94‑1 (MQ=60)
CTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTTGCATAAC > SRR4302537.1198119/1‑94 (MQ=60)
TTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑GTTCCATCTGGCATACCG > SRR4302537.4148934/1‑94 (MQ=60)
CGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGG‑CTGCCATCTGGGATACCGGGA > SRR4302537.3343458/1‑94 (MQ=60)
GGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAA < SRR4302537.1735912/94‑1 (MQ=60)
GGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCCGGAA > SRR4302537.6203036/1‑94 (MQ=60)
GTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAAT < SRR4302537.649076/94‑1 (MQ=60)
CGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAG < SRR4302537.6098039/94‑1 (MQ=60)
CAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGTC‑CTGCCCTCTGGGATACCGGGCATAGGG > SRR4302537.5787132/1‑94 (MQ=60)
CAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGG < SRR4302537.3067228/94‑1 (MQ=60)
AGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGC < SRR4302537.3792258/94‑1 (MQ=60)
AGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGC < SRR4302537.5180303/94‑1 (MQ=60)
GTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCT < SRR4302537.755303/94‑1 (MQ=60)
GGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGGATAGGGGTGG > SRR4302537.4194606/1‑94 (MQ=60)
GAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAA > SRR4302537.3956486/1‑94 (MQ=60)
AGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAAT < SRR4302537.2509764/94‑1 (MQ=60)
AGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAAT > SRR4302537.3971297/1‑94 (MQ=60)
GGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATT < SRR4302537.3014362/94‑1 (MQ=60)
AAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGG < SRR4302537.2345693/94‑1 (MQ=60)
AAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGG < SRR4302537.4328648/94‑1 (MQ=60)
AATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGG < SRR4302537.2244847/94‑1 (MQ=60)
ATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGGAATTGAAGGGG > SRR4302537.2420125/1‑94 (MQ=60)
ATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGG < SRR4302537.5301300/94‑1 (MQ=60)
ATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGG < SRR4302537.1511045/94‑1 (MQ=60)
ATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAAGGG > SRR4302537.355361/1‑94 (MQ=60)
ATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGA‑TTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGG > SRR4302537.5774268/1‑94 (MQ=60)
TTTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGC > SRR4302537.2646467/1‑94 (MQ=60)
TTTTACAGCGTTGCTGTTCATCAAGATGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGC < SRR4302537.4866583/94‑1 (MQ=60)
TTTACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCA < SRR4302537.1983980/94‑1 (MQ=60)
TTACAGCGTTGCTGTGCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAG < SRR4302537.2197421/94‑1 (MQ=60)
TACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGT < SRR4302537.232428/94‑1 (MQ=60)
ACAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑CTGCCATCTGGtacacccgggataaggcgggaaattgaggggggcgcg > SRR4302537.5274293/1‑57 (MQ=60)
CAGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGC < SRR4302537.1115852/94‑1 (MQ=60)
AGCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCA > SRR4302537.1248478/1‑94 (MQ=60)
GCGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAA < SRR4302537.3607091/94‑1 (MQ=60)
CGTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAAC > SRR4302537.3246632/1‑94 (MQ=60)
GTTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGGGCAACA > SRR4302537.2893492/1‑94 (MQ=60)
GTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACA < SRR4302537.4322579/94‑1 (MQ=60)
TTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCCGTGCAACAC > SRR4302537.3251232/1‑94 (MQ=60)
TTGCTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACAC < SRR4302537.2584696/94‑1 (MQ=60)
CTGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCC > SRR4302537.3304673/1‑94 (MQ=60)
TGTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCC < SRR4302537.348197/94‑1 (MQ=60)
GTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCC > SRR4302537.4878282/1‑94 (MQ=60)
GTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCC < SRR4302537.2707619/94‑1 (MQ=60)
GTTCATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCC > SRR4302537.456286/1‑94 (MQ=60)
CATCAAGCTGAATGCGGGGCGTATTGGCGGGG‑TTGCCATCGGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCA < SRR4302537.5125837/94‑1 (MQ=60)
CATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCA > SRR4302537.965040/1‑94 (MQ=60)
CATCAAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCA > SRR4302537.2387354/1‑94 (MQ=60)
AAGCTGAATGCGGGGCGTCTTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCC < SRR4302537.1930349/94‑1 (MQ=60)
AAGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCC > SRR4302537.5472645/1‑94 (MQ=60)
AGCTGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCCTACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACACG > SRR4302537.622820/1‑94 (MQ=60)
CTGAATGCGGGGCGTATTGGCGGGC‑GTGCCATCTGGCAAAACGGGGATAGGGCTGGGAATTGCAGGGGGAGTGCAACACGCCCCGCAACCCGGA > SRR4302537.1571429/1‑94 (MQ=60)
TGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGAC < SRR4302537.4823032/94‑1 (MQ=60)
TGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGAC < SRR4302537.425879/94‑1 (MQ=60)
TGAATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGAC < SRR4302537.2120553/94‑1 (MQ=60)
AATGCGGGGCGTATTGGCGGGG‑TTGCCATCTGGGCTACCGGGAATAGGGCTGGAAACTGAAGGGGCCGCGCAACACGCCCCGCAACACGGACGG > SRR4302537.3026351/1‑94 (MQ=60)
ATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGC > SRR4302537.2084060/1‑94 (MQ=60)
ATGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGC > SRR4302537.853026/1‑94 (MQ=60)
TGCGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCA < SRR4302537.6035075/94‑1 (MQ=60)
CGGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATT > SRR4302537.2499407/1‑94 (MQ=60)
GGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCCGACGGCGTTC > SRR4302537.494111/1‑94 (MQ=60)
|
ACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGC‑TTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTC > NC_000913/2263126‑2263312
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
