Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,281,852 |
A→T |
M39K (ATG→AAG) |
yejK ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,281,852 | 0 | A | T | 97.7%
| 749.8
/ 7.6
| 213 | M39K (ATG→AAG) | yejK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (4/1); new base T (117/91); total (121/92) |
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 |
Only 100 of 220 total aligned reads displayed.
AAGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGA > NC_000913/2281762‑2281941
|
aaGCCCAGCGTCGCCGCCAGTTCCCTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTtc < 1:3273594/93‑1 (MQ=255)
aGCGCAGCGTCTGCCCCAGTTCACTCTCTTCTCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTtct < 1:5636896/93‑1 (MQ=255)
gcgcGGCGTCGGCGCCAGTTCTCTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTtctc < 2:1323823/93‑1 (MQ=255)
gcgcAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTtctc > 1:14830/1‑93 (MQ=255)
cgcgGCGTCTGCGCCAGTTCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCa < 2:6223511/93‑1 (MQ=255)
gcAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCaa > 1:638006/1‑93 (MQ=255)
gaGCGTCTGCGCCAGTTCCCTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAac < 2:5042000/92‑1 (MQ=255)
cAGCTTCTGCGCCATTTCACTCTCTTCGTTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAac < 2:3691537/93‑1 (MQ=255)
cAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAac > 2:2958669/1‑93 (MQ=255)
cAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAac > 1:2872889/1‑93 (MQ=255)
cAGCGTCGCCGCCAGTTCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAac < 1:193447/93‑1 (MQ=255)
aGCGTCTGCGCCAGTTCACTCTCTCCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAacg < 1:2974109/93‑1 (MQ=255)
gCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAacga > 2:1687662/1‑93 (MQ=255)
tCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACgg > 1:131426/1‑93 (MQ=255)
tCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACgg > 1:3652150/1‑93 (MQ=255)
cTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGt < 1:238468/93‑1 (MQ=255)
tGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGtt > 1:5904569/1‑93 (MQ=255)
gcgcCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGttt < 1:884649/93‑1 (MQ=255)
ccAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTg > 2:3980752/1‑93 (MQ=255)
aGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTc < 1:6192921/93‑1 (MQ=255)
aGTCCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTc < 1:3704191/93‑1 (MQ=255)
gTTCACTCTCTCCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCg < 2:5994985/93‑1 (MQ=255)
ttCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTATGTCgg > 2:323237/1‑93 (MQ=255)
ctctctTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTcc > 2:4910709/1‑93 (MQ=255)
ctctctTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTcc > 2:2708903/1‑93 (MQ=255)
ctctctTCGCTAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTcc < 1:5232896/93‑1 (MQ=255)
ccttctTCGCAAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTcc < 1:3921641/90‑1 (MQ=255)
ctctTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAg > 1:5722522/1‑93 (MQ=255)
tctTCGCTAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGc < 2:1663481/93‑1 (MQ=255)
ctTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCa > 2:4579338/1‑93 (MQ=255)
ttCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCaa > 2:6372198/1‑93 (MQ=255)
ttCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCaa < 1:2481028/93‑1 (MQ=255)
gCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGa > 1:1022168/1‑93 (MQ=255)
cTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGaa > 2:4697328/1‑93 (MQ=255)
tAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAAt > 2:3269529/1‑93 (MQ=255)
tAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAAt < 1:4307863/93‑1 (MQ=255)
tAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAAt > 2:5304079/1‑93 (MQ=255)
aaCAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATcg > 1:5414240/1‑93 (MQ=255)
aaaaGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATcgc < 1:762240/91‑1 (MQ=255)
aCAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATcgc < 2:2464477/93‑1 (MQ=255)
cAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATcgcg > 2:649153/1‑93 (MQ=255)
aaGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCgcgc > 2:1838401/1‑93 (MQ=255)
aGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCa > 2:3633813/1‑93 (MQ=255)
aGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCa > 2:731309/1‑93 (MQ=255)
gCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCaa > 2:1039294/1‑93 (MQ=255)
gCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCaa > 2:2495603/1‑93 (MQ=255)
ccGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAac < 1:675585/93‑1 (MQ=255)
cGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAaca > 1:496664/1‑93 (MQ=255)
tAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACAcc < 2:475488/93‑1 (MQ=255)
aGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAg < 1:3078965/93‑1 (MQ=255)
gCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGc < 2:160768/93‑1 (MQ=255)
gCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACAACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGc < 1:3457937/93‑1 (MQ=255)
cTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCt < 1:2524311/93‑1 (MQ=255)
tttATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTc > 2:1503578/1‑93 (MQ=255)
tttATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTc < 2:6699/93‑1 (MQ=255)
tttATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTc > 1:4800300/1‑93 (MQ=255)
tATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCaa < 2:2223329/93‑1 (MQ=255)
tATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCaa < 2:2763069/93‑1 (MQ=255)
ttttttGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAg < 2:2722513/92‑1 (MQ=255)
ttGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTc < 2:1925350/93‑1 (MQ=255)
ttGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTc < 2:88401/93‑1 (MQ=255)
gcgcTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGc < 2:5624158/93‑1 (MQ=255)
gcgcTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGc < 1:6084197/93‑1 (MQ=255)
gcTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtc > 2:5911946/1‑93 (MQ=255)
tataGACCTGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcat > 2:6331117/1‑93 (MQ=255)
ataGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcatc > 2:1755346/1‑93 (MQ=255)
ataGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcatc > 2:2859235/1‑93 (MQ=255)
taGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcatca > 2:4465321/1‑93 (MQ=255)
taGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcatca < 1:3027131/93‑1 (MQ=255)
taGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCtcatca > 2:4046382/1‑93 (MQ=255)
aGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCAc > 1:2151923/1‑93 (MQ=255)
gACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCACCACCAGCTCAAGGTTCTGCTCATCAcc > 2:3766523/1‑92 (MQ=255)
gACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACg > 2:3587680/1‑93 (MQ=255)
gACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACg > 1:5855043/1‑93 (MQ=255)
gACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACg > 1:3398338/1‑93 (MQ=255)
ccGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCATGCtt > 1:4578868/1‑93 (MQ=255)
cGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTg > 1:3973150/1‑93 (MQ=255)
gATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGa > 1:5530393/1‑93 (MQ=255)
aTGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGAt > 2:1128539/1‑93 (MQ=255)
tGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATa < 2:2641473/93‑1 (MQ=255)
tGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATa > 1:6270162/1‑93 (MQ=255)
gCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATaa < 2:2268322/93‑1 (MQ=255)
gCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATaa < 2:5555686/93‑1 (MQ=255)
aGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGc > 1:1800819/1‑93 (MQ=255)
aGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGc > 1:10118/1‑93 (MQ=255)
aGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGc > 1:6427280/1‑93 (MQ=255)
gTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCt > 1:5980551/1‑93 (MQ=255)
gTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCt > 1:1569493/1‑93 (MQ=255)
gTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCt > 2:434518/1‑93 (MQ=255)
ttCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTg > 2:4244001/1‑93 (MQ=255)
ttCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTg > 1:4512006/1‑93 (MQ=255)
ttCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTg > 2:3929770/1‑93 (MQ=255)
ttCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTg < 2:2103625/93‑1 (MQ=255)
cTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGt < 2:3652150/93‑1 (MQ=255)
tGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTg > 1:2223862/1‑93 (MQ=255)
ccacctTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCa < 2:5132076/93‑1 (MQ=255)
ccacctTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCa > 2:706588/1‑93 (MQ=255)
ccacctTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCa > 2:1485423/1‑93 (MQ=255)
acctTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCaga < 1:4121636/93‑1 (MQ=255)
acctTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCaga < 1:1925942/93‑1 (MQ=255)
|
AAGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGA > NC_000913/2281762‑2281941
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGAG > NC_000913/2281762‑2281942
|
AAGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCT > SRR4302537.3259395/1‑94 (MQ=60)
AAGCCCAGCGTCGCCGCCAGTTCCCTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCT < SRR4302537.3296695/94‑1 (MQ=60)
AGCGCAGCGTCTGCGCCAGTTCCCTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTC < SRR4302537.5744039/94‑1 (MQ=60)
AGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTC > SRR4302537.14948/1‑94 (MQ=60)
AGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTC > SRR4302537.6334011/1‑94 (MQ=60)
AGCGCAGCGTCTGCCCCAGTTCACTCTCTTCTCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTC < SRR4302537.5675473/94‑1 (MQ=60)
gccccgcttcggcccctgttccCTCTCTTCGTTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCA < SRR4302537.4852315/72‑1 (MQ=60)
CGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAA > SRR4302537.773288/1‑94 (MQ=60)
CGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAA > SRR4302537.642350/1‑94 (MQ=60)
cgAGCGTCTGCCCCATTTCCCTCTCTTCGCAAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAAC < SRR4302537.642912/92‑1 (MQ=60)
GCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAAC > SRR4302537.2893051/1‑94 (MQ=60)
GCAGCGTCTGCGCCAGTTCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAAC < SRR4302537.5178315/94‑1 (MQ=60)
CAGCGTCGCCGCCAGTTCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACG < SRR4302537.194822/94‑1 (MQ=60)
AGCGTCTGCGCCAGTTCACTCTCTCCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGA < SRR4302537.2994939/94‑1 (MQ=60)
AGCGTCTGCCCCAGTCCCCTCTCTTCGAAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGA < SRR4302537.5901511/94‑1 (MQ=60)
GTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGG > SRR4302537.2036696/1‑94 (MQ=60)
GTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGG > SRR4302537.132357/1‑94 (MQ=60)
GTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGG > SRR4302537.3677859/1‑94 (MQ=60)
CTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTT < SRR4302537.240156/94‑1 (MQ=60)
CTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTT > SRR4302537.5945087/1‑94 (MQ=60)
GCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTC < SRR4302537.890738/94‑1 (MQ=60)
CGCCAGTTCCCTCTCTTCGAAAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCT < SRR4302537.58701/94‑1 (MQ=60)
cccattcccCTCTCTCCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTG < SRR4302537.514366/85‑1 (MQ=60)
CCAGTTCGCTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGT > SRR4302537.995020/1‑94 (MQ=60)
AGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCG < SRR4302537.6235590/94‑1 (MQ=60)
AGTCCACTCTCTTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCG < SRR4302537.3730244/94‑1 (MQ=60)
GTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGCCGG > SRR4302537.4849998/1‑94 (MQ=60)
TTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGT > SRR4302537.1366077/1‑94 (MQ=60)
TCCCTCTCTGCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTT < SRR4302537.1941864/94‑1 (MQ=60)
CACTCTCTTCGCTAAACTAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTC > SRR4302537.6022618/1‑94 (MQ=60)
CACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTC < SRR4302537.1024518/94‑1 (MQ=60)
cctTCTTCGCAAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCA < SRR4302537.3949048/91‑1 (MQ=60)
CTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCA > SRR4302537.5033610/1‑94 (MQ=60)
CTCTCTTCGCTAAAAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCA < SRR4302537.5268891/94‑1 (MQ=60)
TCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAG > SRR4302537.5761694/1‑94 (MQ=60)
CTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAA > SRR4302537.5630013/1‑94 (MQ=60)
TTCGCAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAAT < SRR4302537.2498468/94‑1 (MQ=60)
cgtaaaaaAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGA < SRR4302537.1814276/86‑1 (MQ=60)
CGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGA > SRR4302537.1029207/1‑94 (MQ=60)
CAAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAAT < SRR4302537.179627/94‑1 (MQ=60)
TAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATC < SRR4302537.4337805/94‑1 (MQ=60)
AAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATC < SRR4302537.4723820/94‑1 (MQ=60)
AAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCG < SRR4302537.3317519/94‑1 (MQ=60)
AAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCG > SRR4302537.5451153/1‑94 (MQ=60)
ACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCG < SRR4302537.3077671/94‑1 (MQ=60)
AAAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCG < SRR4302537.767446/94‑1 (MQ=60)
AAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGC < SRR4302537.4301463/94‑1 (MQ=60)
AAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCA > SRR4302537.5499257/1‑94 (MQ=60)
CCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACA < SRR4302537.680212/94‑1 (MQ=60)
CCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACA > SRR4302537.500081/1‑94 (MQ=60)
CGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACAC > SRR4302537.862301/1‑94 (MQ=60)
CGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACAC > SRR4302537.4095887/1‑94 (MQ=60)
GTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACC < SRR4302537.719736/94‑1 (MQ=60)
TACGCTTTCTTTTTGACTCTAGAGACCCGATGCAGTTCTTCTGCCTTCTCAACGGCGGTTTCTGTCGGTTCCAGCAATGAAACGCGCAACTCCA < SRR4302537.5549380/94‑1 (MQ=30)
AAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAG > SRR4302537.29781/1‑94 (MQ=60)
AGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGC < SRR4302537.3100411/94‑1 (MQ=60)
GCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCT > SRR4302537.3685891/1‑94 (MQ=60)
GCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCT < SRR4302537.4581732/94‑1 (MQ=60)
GCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACAACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCT < SRR4302537.3482386/94‑1 (MQ=60)
CTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTC > SRR4302537.2321201/1‑94 (MQ=60)
CTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTC < SRR4302537.2542032/94‑1 (MQ=60)
CTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTC > SRR4302537.4833420/1‑94 (MQ=60)
tttatcttgtgaGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCA < SRR4302537.494172/82‑1 (MQ=60)
TTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCA > SRR4302537.2315676/1‑94 (MQ=60)
ATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGG > SRR4302537.3815805/1‑94 (MQ=60)
ATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGG < SRR4302537.1810315/94‑1 (MQ=60)
TTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTT < SRR4302537.5852987/94‑1 (MQ=60)
TTTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTC > SRR4302537.3620139/1‑94 (MQ=60)
TTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCT < SRR4302537.2477089/94‑1 (MQ=60)
TTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCT > SRR4302537.359612/1‑94 (MQ=60)
TTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCT < SRR4302537.5361565/94‑1 (MQ=60)
TTGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCT < SRR4302537.3459025/94‑1 (MQ=60)
TGGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTG < SRR4302537.3018516/94‑1 (MQ=60)
GGCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGC > SRR4302537.3030538/1‑94 (MQ=60)
GCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCT < SRR4302537.2527087/94‑1 (MQ=60)
GCGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCT < SRR4302537.6125999/94‑1 (MQ=60)
CGCTATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTC < SRR4302537.4312427/94‑1 (MQ=60)
ATAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCA < SRR4302537.5949836/94‑1 (MQ=60)
TAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCAC < SRR4302537.3048235/94‑1 (MQ=60)
TAGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCAC > SRR4302537.2167092/1‑94 (MQ=60)
AGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACG > SRR4302537.3422410/1‑94 (MQ=60)
AGACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACG > SRR4302537.5895203/1‑94 (MQ=60)
GACCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGC > SRR4302537.4511156/1‑94 (MQ=60)
CCCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCATGCTT > SRR4302537.4610549/1‑94 (MQ=60)
CCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTT > SRR4302537.4000961/1‑94 (MQ=60)
CCGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTG > SRR4302537.4000963/1‑94 (MQ=60)
CGATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGA > SRR4302537.5568144/1‑94 (MQ=60)
ATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATA > SRR4302537.6313192/1‑94 (MQ=60)
ATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATA < SRR4302537.6271692/94‑1 (MQ=60)
ATGCAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATA < SRR4302537.6271693/94‑1 (MQ=60)
CAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGC > SRR4302537.6470955/1‑94 (MQ=60)
CAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGC > SRR4302537.6503927/1‑94 (MQ=60)
CAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGC > SRR4302537.10193/1‑94 (MQ=60)
CAGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGC > SRR4302537.1813384/1‑94 (MQ=60)
AGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCT > SRR4302537.1580444/1‑94 (MQ=60)
AGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCT > SRR4302537.6021599/1‑94 (MQ=60)
AGTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCT > SRR4302537.1271064/1‑94 (MQ=60)
GTTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTG > SRR4302537.4543208/1‑94 (MQ=60)
TTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGG < SRR4302537.2208724/94‑1 (MQ=60)
TTCTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGG > SRR4302537.2886961/1‑94 (MQ=60)
CTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTG > SRR4302537.6210867/1‑94 (MQ=60)
CTGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTG > SRR4302537.2239528/1‑94 (MQ=60)
TGCCACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGC > SRR4302537.1525263/1‑94 (MQ=60)
ACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGAG < SRR4302537.4150410/94‑1 (MQ=60)
ACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGAG < SRR4302537.1939307/94‑1 (MQ=60)
ACCTTCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGAG > SRR4302537.4698291/1‑94 (MQ=60)
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AAGCGCAGCGTCTGCGCCAGTTCACTCTCTTCGCTAAACAAGCCGTAAGCTTTATTTTTGGCGCTATAGACCCGATGCAGTTCTGCCACCATCTCAACGACGGTTTCTGTCGGTTCCAGCAATGAATCGCGCAACACCAGCTCAAGGTTCTGCTCATCACGCTTGATAAGCTGGTGCAGAG > NC_000913/2281762‑2281942
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
