Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,358,426 |
T→C |
T341A (ACC→GCC) |
b2247 ← |
putative racemase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,358,426 | 0 | T | C | 96.4%
| 712.1
/ 9.9
| 220 | T341A (ACC→GCC) | b2247 | putative racemase |
| Reads supporting (aligned to +/- strand): ref base T (4/4); new base C (96/116); total (100/120) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 |
Only 100 of 225 total aligned reads displayed.
CATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCG > NC_000913/2358336‑2358515
|
cATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGgaga > 1:4297202/1‑93 (MQ=255)
aTTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGAt < 1:4593998/93‑1 (MQ=255)
aTTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGAt > 1:2026873/1‑93 (MQ=255)
ttGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATc < 2:2920082/93‑1 (MQ=255)
gAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCAc < 1:5053739/93‑1 (MQ=255)
aGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCAcc > 2:150089/1‑93 (MQ=255)
gCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCg > 1:4544720/1‑93 (MQ=255)
gAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCAt > 2:5176359/1‑93 (MQ=255)
gAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCAt > 2:2393454/1‑93 (MQ=255)
aTCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATgg < 2:5373719/93‑1 (MQ=255)
aTCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATgg > 2:685547/1‑93 (MQ=255)
cGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTg < 2:4765647/93‑1 (MQ=255)
cGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTg < 1:130562/93‑1 (MQ=255)
gggTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTga < 1:5720033/93‑1 (MQ=255)
gggTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTga < 1:5416002/93‑1 (MQ=255)
gTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTgaga < 1:1584400/93‑1 (MQ=255)
tCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGagag > 1:3191715/1‑93 (MQ=255)
cAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGt < 2:5152092/93‑1 (MQ=255)
cAAACTGCGCACGCATCGTTGAACAATCCGGGCTGGCCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGt < 2:4125958/93‑1 (MQ=255)
aaCTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATCGGTGAAGGCGATCACCGCATGGTGAGAGTaa > 1:6190174/1‑93 (MQ=255)
aCTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTaaa > 2:813887/1‑93 (MQ=255)
cTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAAc > 1:6006913/1‑93 (MQ=255)
cTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAAc < 2:4966232/93‑1 (MQ=255)
tGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACa < 2:3921939/93‑1 (MQ=255)
tGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACa < 2:2469313/93‑1 (MQ=255)
cGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGa < 2:2319917/93‑1 (MQ=255)
ggACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGAc < 1:1455634/93‑1 (MQ=255)
ggACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGAc < 1:1291349/93‑1 (MQ=255)
gACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACg > 2:2874631/1‑93 (MQ=255)
gACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACg > 1:247951/1‑93 (MQ=255)
gCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAAc > 1:4412677/1‑93 (MQ=255)
gCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAAc < 2:5631008/93‑1 (MQ=255)
aTCGTTGAACAATCCGGTCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCg > 2:881281/1‑93 (MQ=255)
aTCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCg > 1:2758239/1‑93 (MQ=255)
aTCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCg < 1:496703/93‑1 (MQ=255)
aTCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCg > 2:1351174/1‑93 (MQ=255)
aTCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCg < 1:984732/93‑1 (MQ=255)
aTCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCg > 2:6131447/1‑93 (MQ=255)
tCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCTTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGt > 2:5931575/1‑93 (MQ=255)
tCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGt > 2:5063304/1‑93 (MQ=255)
cGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTg > 2:1907170/1‑93 (MQ=255)
cGTTGAACAATCCGGGCTGGTAATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTg < 2:4617625/93‑1 (MQ=255)
gTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACAGTGc > 2:5539139/1‑93 (MQ=255)
tGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCgg > 1:2344287/1‑93 (MQ=255)
gAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGc > 1:2649626/1‑93 (MQ=255)
gAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGc > 1:449013/1‑93 (MQ=255)
aCAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcac > 2:5816253/1‑93 (MQ=255)
cAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcacc > 1:2132920/1‑93 (MQ=255)
cAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcacc < 2:1610540/93‑1 (MQ=255)
aaTCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcacca < 2:279528/93‑1 (MQ=255)
aTCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcaccac > 1:2004794/1‑93 (MQ=255)
aTCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGcaccac < 2:4263611/93‑1 (MQ=255)
aTCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGGGCGGcaccac > 1:3532534/1‑93 (MQ=255)
tCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCaccacc < 2:4481183/93‑1 (MQ=255)
ccGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCAccacca < 2:482750/93‑1 (MQ=255)
cGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAg < 2:6295212/93‑1 (MQ=255)
cGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAg > 1:4181634/1‑93 (MQ=255)
cGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAg < 2:3497322/93‑1 (MQ=255)
ggCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGtt < 1:954765/93‑1 (MQ=255)
cTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGc > 1:445307/1‑93 (MQ=255)
ggTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGccc > 2:1796689/1‑93 (MQ=255)
ggTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGccc > 1:1515199/1‑93 (MQ=255)
catcaGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCt < 1:4127178/93‑1 (MQ=255)
atcaGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTg < 2:4620713/93‑1 (MQ=255)
atcaGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTg > 1:114482/1‑93 (MQ=255)
tcaGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTgg > 2:617709/1‑93 (MQ=255)
caGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGa < 2:2481403/93‑1 (MQ=255)
aGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAt > 1:515780/1‑93 (MQ=255)
aGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAt < 2:4074987/93‑1 (MQ=255)
ggAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAtt > 2:1138709/1‑93 (MQ=255)
gAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAttt < 2:3154967/93‑1 (MQ=255)
aaTTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTg > 2:1090471/1‑93 (MQ=255)
aaTTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTg > 2:2248024/1‑93 (MQ=255)
aTTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTgg > 1:1404706/1‑93 (MQ=255)
ttCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGc < 1:5872445/93‑1 (MQ=255)
tgCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGa < 1:5134087/92‑1 (MQ=255)
cGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGa < 1:2919023/93‑1 (MQ=255)
gAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGc > 1:2081496/1‑93 (MQ=255)
aTGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCgg < 1:2836662/93‑1 (MQ=255)
aTGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCgg < 2:5868673/93‑1 (MQ=255)
tGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGc > 1:3342957/1‑93 (MQ=255)
gCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCaa > 1:5299618/1‑93 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt < 1:3599443/93‑1 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt < 2:2185582/93‑1 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt < 1:3673193/93‑1 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt > 2:5079194/1‑93 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt < 2:5158465/93‑1 (MQ=255)
gTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAtt > 1:1725214/1‑93 (MQ=255)
tATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAttt < 2:2823712/93‑1 (MQ=255)
tATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAttt > 1:3845292/1‑93 (MQ=255)
tATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAttt < 2:3800913/93‑1 (MQ=255)
ttGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTcc > 2:3303536/1‑93 (MQ=255)
ggTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccac > 1:6136612/1‑93 (MQ=255)
gTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccacc < 1:83650/93‑1 (MQ=255)
tGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccacca < 1:6052518/93‑1 (MQ=255)
tGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccacca > 1:628110/1‑93 (MQ=255)
tGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTccacca < 1:4189180/93‑1 (MQ=255)
gAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAg > 1:3439649/1‑93 (MQ=255)
aGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCg > 2:3316784/1‑93 (MQ=255)
aGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCg > 2:257086/1‑93 (MQ=255)
|
CATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCG > NC_000913/2358336‑2358515
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGT > NC_000913/2358333‑2358519
|
GCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGC < SRR4302537.5814676/94‑1 (MQ=60)
GCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGC < SRR4302537.4466387/94‑1 (MQ=60)
CTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCG < SRR4302537.191013/94‑1 (MQ=60)
CTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCG < SRR4302537.4191887/94‑1 (MQ=60)
CTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCG < SRR4302537.2456548/94‑1 (MQ=60)
TCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGA > SRR4302537.4207237/1‑94 (MQ=60)
TCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGAGA > SRR4302537.4327073/1‑94 (MQ=60)
CATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGAT < SRR4302537.125834/94‑1 (MQ=60)
CATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGAT > SRR4302537.2041009/1‑94 (MQ=60)
ATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATC < SRR4302537.4625771/94‑1 (MQ=60)
ATTGAGCAGAATCGGGTCAAACTGCGGACGCATCATTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATC < SRR4302537.2665670/94‑1 (MQ=60)
TTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCA < SRR4302537.513658/94‑1 (MQ=60)
GAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACC < SRR4302537.5088532/94‑1 (MQ=60)
AGNAGAATCGGGTCAAACTGCNNACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCG < SRR4302537.2768345/94‑1 (MQ=60)
AGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCG > SRR4302537.4576174/1‑94 (MQ=60)
AGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCG > SRR4302537.5902241/1‑94 (MQ=60)
AGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCG < SRR4302537.5208952/94‑1 (MQ=60)
AGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCAT < SRR4302537.2933914/94‑1 (MQ=60)
AATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACAGCATGG < SRR4302537.3644942/94‑1 (MQ=60)
TCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTG < SRR4302537.3581722/94‑1 (MQ=60)
CGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGA < SRR4302537.131487/94‑1 (MQ=60)
GGGTTAAACTGCGGACACATAGTTGAACACTCCGGGCTGATCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAG < SRR4302537.4492527/94‑1 (MQ=60)
GGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAG < SRR4302537.5452929/94‑1 (MQ=60)
GGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAG < SRR4302537.5759185/94‑1 (MQ=60)
GTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAG > SRR4302537.3214157/1‑94 (MQ=60)
GTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAG < SRR4302537.1595473/94‑1 (MQ=60)
TCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGT < SRR4302537.1305316/94‑1 (MQ=60)
AAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAA > SRR4302537.2813580/1‑94 (MQ=60)
AAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATCGGTGAAGGCGATCACCGCATGGTGAGAGTAA > SRR4302537.6232819/1‑94 (MQ=60)
ACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAAC > SRR4302537.6048184/1‑94 (MQ=60)
CTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCTGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACA > SRR4302537.5111795/1‑94 (MQ=60)
CTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACA < SRR4302537.937695/94‑1 (MQ=60)
ATGCGGACGCATCGTTGAACAATCCGGGCTTGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACA < SRR4302537.4211580/94‑1 (MQ=60)
GCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGA < SRR4302537.3797798/94‑1 (MQ=60)
CGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGAC < SRR4302537.2106393/94‑1 (MQ=60)
GGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACG > SRR4302537.249711/1‑94 (MQ=60)
GGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACG < SRR4302537.1465771/94‑1 (MQ=60)
GGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACG > SRR4302537.5356457/1‑94 (MQ=60)
GGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACG < SRR4302537.1300327/94‑1 (MQ=60)
CGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAAC > SRR4302537.6173774/1‑94 (MQ=60)
CGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAAC > SRR4302537.4443133/1‑94 (MQ=60)
CGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAAC < SRR4302537.1366364/94‑1 (MQ=60)
GCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACC < SRR4302537.5690667/94‑1 (MQ=60)
TATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCG < SRR4302537.6246300/94‑1 (MQ=60)
CATCGTTGAACAATCCGGGCTGGTCATCAGGAATTTGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCG > SRR4302537.6058698/1‑94 (MQ=60)
CATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCG > SRR4302537.2777494/1‑94 (MQ=60)
ATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGT < SRR4302537.5187049/94‑1 (MQ=60)
ATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGT < SRR4302537.500120/94‑1 (MQ=60)
ATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGT < SRR4302537.991532/94‑1 (MQ=60)
ATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGT > SRR4302537.2300608/1‑94 (MQ=60)
TCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTG < SRR4302537.2160396/94‑1 (MQ=60)
CGTTGAACAATCGGGGCT‑GTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCG < SRR4302537.4332843/94‑1 (MQ=60)
CGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGC < SRR4302537.3889944/94‑1 (MQ=60)
TTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGG < SRR4302537.2033830/94‑1 (MQ=60)
TTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGG > SRR4302537.2360795/1‑94 (MQ=60)
TGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGC > SRR4302537.452123/1‑94 (MQ=60)
TGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGC > SRR4302537.2668157/1‑94 (MQ=60)
GAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCA < SRR4302537.4624870/94‑1 (MQ=60)
ACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACC > SRR4302537.2147931/1‑94 (MQ=60)
ACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACC < SRR4302537.3371903/94‑1 (MQ=60)
CAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCA > SRR4302537.4990659/1‑94 (MQ=60)
AATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCAC > SRR4302537.2018733/1‑94 (MQ=60)
AATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCAC < SRR4302537.3112093/94‑1 (MQ=60)
AATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGGGCGGCACCAC > SRR4302537.3557498/1‑94 (MQ=60)
ATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACC > SRR4302537.2017115/1‑94 (MQ=60)
CCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAG > SRR4302537.4210826/1‑94 (MQ=60)
GGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTT > SRR4302537.425157/1‑94 (MQ=60)
GGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTT < SRR4302537.4534466/94‑1 (MQ=60)
GGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTG < SRR4302537.4575376/94‑1 (MQ=60)
GGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTG < SRR4302537.961356/94‑1 (MQ=60)
GGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTG < SRR4302537.3520068/94‑1 (MQ=60)
GCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGC > SRR4302537.448397/1‑94 (MQ=60)
CTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCC > SRR4302537.5703357/1‑94 (MQ=60)
TGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCC > SRR4302537.4443552/1‑94 (MQ=60)
TGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCC > SRR4302537.1525788/1‑94 (MQ=60)
CATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTG > SRR4302537.115316/1‑94 (MQ=60)
CATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTG < SRR4302537.4155986/94‑1 (MQ=60)
ATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGG < SRR4302537.6475542/94‑1 (MQ=60)
CAGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAT > SRR4302537.519329/1‑94 (MQ=60)
AGGAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATT < SRR4302537.5028387/94‑1 (MQ=60)
GAATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTG > SRR4302537.1425712/1‑94 (MQ=60)
AATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGG > SRR4302537.1571715/1‑94 (MQ=60)
AATTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGG > SRR4302537.1414488/1‑94 (MQ=60)
ATTCGCTGAATTGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGC < SRR4302537.1686779/94‑1 (MQ=60)
TTCGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCG < SRR4302537.5912727/94‑1 (MQ=60)
TGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGAT < SRR4302537.5169460/94‑1 (MQ=60)
CGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGAT < SRR4302537.6008176/94‑1 (MQ=60)
CGCTGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGAT < SRR4302537.2939536/94‑1 (MQ=60)
TGAATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGC > SRR4302537.2096157/1‑94 (MQ=60)
GATGGCGTATTGGCGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGG < SRR4302537.3716873/94‑1 (MQ=60)
AATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGG < SRR4302537.2075025/94‑1 (MQ=60)
ATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGC < SRR4302537.2856505/94‑1 (MQ=60)
ATGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGC > SRR4302537.3366623/1‑94 (MQ=60)
TGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCA > SRR4302537.6098016/1‑94 (MQ=60)
TGGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCA > SRR4302537.1964048/1‑94 (MQ=60)
GGCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAA > SRR4302537.5336018/1‑94 (MQ=60)
GCGTATTGGTGAAGGCGATCACCGCATGGTGAGAGGAAACAGACGAACCGTGCGGGACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAAT > SRR4302537.1428185/1‑94 (MQ=60)
CGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATT < SRR4302537.4483937/94‑1 (MQ=60)
CGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATT > SRR4302537.1737270/1‑94 (MQ=60)
CGTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATT < SRR4302537.3368045/94‑1 (MQ=60)
GTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTT > SRR4302537.3872215/1‑94 (MQ=60)
GTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTT < SRR4302537.4307132/94‑1 (MQ=60)
GTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTT > SRR4302537.1498139/1‑94 (MQ=60)
GTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTT < SRR4302537.3699035/94‑1 (MQ=60)
GTATTGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTT < SRR4302537.3624813/94‑1 (MQ=60)
TGGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCAC > SRR4302537.6178800/1‑94 (MQ=60)
GGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACC < SRR4302537.2469535/94‑1 (MQ=60)
GGTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACC < SRR4302537.866109/94‑1 (MQ=60)
GTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCA < SRR4302537.3324374/94‑1 (MQ=60)
GTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCA > SRR4302537.632386/1‑94 (MQ=60)
GTGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCA < SRR4302537.84263/94‑1 (MQ=60)
TGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAG < SRR4302537.4218436/94‑1 (MQ=60)
TGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAG > SRR4302537.97547/1‑94 (MQ=60)
TGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAG > SRR4302537.3463992/1‑94 (MQ=60)
TGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAG < SRR4302537.2853621/94‑1 (MQ=60)
TGAAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAG < SRR4302537.6094093/94‑1 (MQ=60)
AAGGCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCG > SRR4302537.6204188/1‑94 (MQ=60)
GCGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGG < SRR4302537.3375551/94‑1 (MQ=60)
CGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGT < SRR4302537.3366400/94‑1 (MQ=60)
CGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGT > SRR4302537.4917768/1‑94 (MQ=60)
|
GCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGT > NC_000913/2358333‑2358519
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
