Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,376,797 |
(C)6→7 |
coding (483/1671 nt) |
menD ← |
2‑oxoglutarate decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,376,791 | 1 | . | C | 98.1%
| 516.8
/ 2.0
| 155 | coding (489/1671 nt) | menD | 2‑oxoglutarate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base C (69/83); total (69/86) |
| Fisher's exact test for biased strand distribution p-value = 2.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 178 total aligned reads displayed.
TGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑CCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAA > NC_000913/2376699‑2376878
|
tGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑Ct > 2:2067911/1‑93 (MQ=255)
gCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑c > 2:6405495/1‑93 (MQ=255)
caccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ctc > 1:3581905/1‑91 (MQ=255)
caccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ccc > 1:459601/1‑93 (MQ=255)
caccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ccc < 2:5460031/93‑1 (MQ=255)
ccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ccccc < 2:664470/93‑1 (MQ=255)
ccaGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ccccc < 2:2683545/93‑1 (MQ=255)
aGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑ccccccc < 2:4297545/93‑2 (MQ=255)
cccAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATg > 2:1982097/1‑93 (MQ=255)
cccAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATg > 1:149217/1‑93 (MQ=255)
ccAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGa > 1:1226997/1‑93 (MQ=255)
cAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGaa < 1:951074/93‑1 (MQ=255)
cAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGaa < 1:3270433/93‑1 (MQ=255)
aGACGCTGTTGCCAGCTAAGCCCGGTATGGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAg < 1:3232998/93‑1 (MQ=255)
aGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAg < 2:5355333/93‑1 (MQ=255)
aGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAg > 2:3199222/1‑93 (MQ=255)
aCGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCg < 2:4823737/93‑1 (MQ=255)
cTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTAc < 2:1153933/93‑1 (MQ=255)
tGTTGCCAGCTAAGCCCGGTATCGTCCATTTCTCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTAcc < 1:5414815/93‑1 (MQ=255)
tGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTAcc > 1:3478284/1‑93 (MQ=255)
gTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCg < 2:2400468/93‑1 (MQ=255)
gCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCgaga < 1:2309232/93‑1 (MQ=255)
ccAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGagag < 1:5618732/93‑1 (MQ=255)
ccAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGagag < 1:4869879/93‑1 (MQ=255)
cAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGc < 2:5832470/93‑1 (MQ=255)
gCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGt < 1:4431302/93‑1 (MQ=255)
gCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGt > 1:4874756/1‑93 (MQ=255)
cTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTg < 1:483681/93‑1 (MQ=255)
tAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTgg > 2:133766/1‑93 (MQ=255)
tAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTgg > 2:4489956/1‑93 (MQ=255)
aaGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGt < 1:2540465/93‑1 (MQ=255)
aGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTc > 2:4018653/1‑93 (MQ=255)
gCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCg > 2:4723873/1‑93 (MQ=255)
cccGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGa > 2:3338627/1‑93 (MQ=255)
cccGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGa > 2:2779448/1‑93 (MQ=255)
cccGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGa < 1:4153522/93‑1 (MQ=255)
ctggTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGAt < 2:1769322/91‑1 (MQ=255)
ccGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGGGTGGTCGAt > 1:1923730/1‑93 (MQ=255)
ccGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGAt > 1:5023308/1‑93 (MQ=255)
ggTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATgt > 1:243262/1‑92 (MQ=255)
ggTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATgg > 2:69865/1‑93 (MQ=255)
gTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGt < 2:1871650/93‑1 (MQ=255)
gTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGt < 1:3398376/93‑1 (MQ=255)
aTCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAg > 2:2950067/1‑93 (MQ=255)
cGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGaa < 1:5938358/93‑1 (MQ=255)
tCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAAc > 2:5866437/1‑93 (MQ=255)
ccATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAAcc < 1:6016922/93‑1 (MQ=255)
ccATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAAcc > 2:3771510/1‑93 (MQ=255)
cATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCa > 2:1930610/1‑93 (MQ=255)
cATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCa < 2:127106/93‑1 (MQ=255)
cATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCa > 1:704952/1‑93 (MQ=255)
cATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCa < 1:5426880/93‑1 (MQ=255)
tttCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGc < 1:3655227/93‑1 (MQ=255)
tttCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGc > 1:5248935/1‑93 (MQ=255)
cGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCaa < 1:2114053/93‑1 (MQ=255)
gCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAAc > 2:5068733/1‑93 (MQ=255)
ccATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACg < 2:542206/93‑1 (MQ=255)
ccATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACg < 2:33509/93‑1 (MQ=255)
gaTACAGCGAATCAGCAAACGGGCAGTTGATATGGAGGC‑CCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGATAGAAACCAGCAAACGt < 2:5017364/92‑1 (MQ=255)
cATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGt > 1:2144607/1‑93 (MQ=255)
cATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGt > 1:6284713/1‑93 (MQ=255)
tACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGc > 2:3534149/1‑93 (MQ=255)
tACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGc < 1:4963262/93‑1 (MQ=255)
tACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGc < 1:2527858/93‑1 (MQ=255)
aCAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCg > 1:2715775/1‑93 (MQ=255)
aCAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCg < 1:820039/93‑1 (MQ=255)
cAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCgg < 2:3743124/93‑1 (MQ=255)
cAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCgg < 1:4301057/93‑1 (MQ=255)
aGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCggg > 2:1691411/1‑93 (MQ=255)
gCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCgggg < 1:1638676/93‑1 (MQ=255)
gggTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGa < 2:5134325/92‑1 (MQ=255)
cGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGa < 1:1476748/93‑1 (MQ=255)
ggTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGat > 2:226150/1‑93 (MQ=255)
gTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGata < 1:304760/93‑1 (MQ=255)
gTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGata > 2:3065251/1‑93 (MQ=255)
gTTCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGata < 1:5925785/93‑1 (MQ=255)
tCAGCAAACGGGTAGTTGATAGGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATc < 2:2847950/93‑1 (MQ=255)
tCAGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGGGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATc > 2:2183053/1‑93 (MQ=255)
aGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCt < 1:3160745/93‑1 (MQ=255)
aGCAAACGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCt < 2:1790492/93‑1 (MQ=255)
aaaCGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTggg > 2:1883237/1‑93 (MQ=255)
aaCGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGt < 1:195224/93‑1 (MQ=255)
aaCGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGt > 1:1335829/1‑93 (MQ=255)
aCGGGCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTc > 2:4367653/1‑93 (MQ=255)
gggCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCgg > 2:4525566/1‑93 (MQ=255)
ggCAGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCggg < 2:6344696/93‑1 (MQ=255)
aGTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGgcgc < 1:4523100/93‑1 (MQ=255)
gTTGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGcgcg > 2:2638320/1‑93 (MQ=255)
ttGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGGTATCCTGGGTCGGGCGCgg < 2:6281839/93‑1 (MQ=255)
ttGATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCgg > 1:3804283/1‑93 (MQ=255)
gATATGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCa > 2:1086924/1‑93 (MQ=255)
atatGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACGAGCCAACGCGCGGGGATATCCTGGGTCGGGCGCGGCaa > 2:4242910/1‑93 (MQ=255)
atatGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCaa > 1:122544/1‑93 (MQ=255)
atatGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCaa < 1:1285709/93‑1 (MQ=255)
tatGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAAt > 2:3818294/1‑93 (MQ=255)
tatGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAAt < 2:88001/93‑1 (MQ=255)
atGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAACCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATg < 2:2140470/93‑1 (MQ=255)
atGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATg < 2:1652877/93‑1 (MQ=255)
tGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGa < 1:855436/93‑1 (MQ=255)
tGGA‑CTCCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGACAACGTGCGGGGCTATCCTGGGTCGGGGGCGGCAAGGa > 1:5435086/1‑93 (MQ=255)
|
TGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑CCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAA > NC_000913/2376699‑2376878
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑C‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTG > NC_000913/2376710‑2376890
|
ACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATG > SRR4302537.150286/1‑94 (MQ=60)
CCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGA > SRR4302537.1235530/1‑94 (MQ=60)
CCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGA > SRR4302537.2359967/1‑94 (MQ=60)
CCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCGTACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑C‑CCCCCcgcaggaa < SRR4302537.2552850/94‑9 (MQ=60)
CAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAG < SRR4302537.4979872/94‑1 (MQ=60)
CAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAG < SRR4302537.957651/94‑1 (MQ=60)
CAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAG < SRR4302537.3293516/94‑1 (MQ=60)
AGACGCTGTTGCCAGCTAAGCCCGGTATGGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGC < SRR4302537.3255778/94‑1 (MQ=60)
GCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTAC < SRR4302537.3211747/94‑1 (MQ=60)
GCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTAC > SRR4302537.457100/1‑94 (MQ=60)
CTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACC > SRR4302537.3502897/1‑94 (MQ=60)
TGTTGCCAGCTAAGCCCGGTATCGTCCATTTCTCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCG < SRR4302537.5451734/94‑1 (MQ=60)
GCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAG < SRR4302537.717571/94‑1 (MQ=60)
GCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAG < SRR4302537.2325533/94‑1 (MQ=60)
CCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGC < SRR4302537.5657154/94‑1 (MQ=60)
CCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGC < SRR4302537.4903489/94‑1 (MQ=60)
CCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGC < SRR4302537.6016307/94‑1 (MQ=60)
CCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGC < SRR4302537.1890925/94‑1 (MQ=60)
CAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCG < SRR4302537.1297107/94‑1 (MQ=60)
AGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGT > SRR4302537.4908403/1‑94 (MQ=60)
GCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTG < SRR4302537.4461903/94‑1 (MQ=60)
CTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGG < SRR4302537.486995/94‑1 (MQ=60)
AAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTC < SRR4302537.2558279/94‑1 (MQ=60)
AAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTC > SRR4302537.868714/1‑94 (MQ=60)
CCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGGGTGGTCGAT > SRR4302537.1937084/1‑94 (MQ=60)
CCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGAT > SRR4302537.5057905/1‑94 (MQ=60)
CCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGAT < SRR4302537.4182523/94‑1 (MQ=60)
CCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGAT < SRR4302537.4738622/94‑1 (MQ=60)
CGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGT > SRR4302537.244987/1‑94 (MQ=60)
GTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTA < SRR4302537.3422448/94‑1 (MQ=60)
TATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAG < SRR4302537.5499969/94‑1 (MQ=60)
ATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGA < SRR4302537.4410817/94‑1 (MQ=60)
CGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAA < SRR4302537.5979112/94‑1 (MQ=60)
GTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAAC > SRR4302537.3078463/1‑94 (MQ=60)
TCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACA > SRR4302537.521743/1‑94 (MQ=60)
TCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑CACCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACC < SRR4302537.1600283/94‑1 (MQ=60)
CCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCA > SRR4302537.709774/1‑94 (MQ=60)
CCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCA < SRR4302537.2233514/94‑1 (MQ=60)
CCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCA < SRR4302537.6058260/94‑1 (MQ=60)
CATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAG < SRR4302537.5463878/94‑1 (MQ=60)
ATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGC > SRR4302537.5285057/1‑94 (MQ=60)
TTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCC < SRR4302537.3680949/94‑1 (MQ=60)
TTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCA < SRR4302537.1273685/94‑1 (MQ=60)
TTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCAA < SRR4302537.3788201/94‑1 (MQ=60)
CGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAAG > SRR4302537.3440871/1‑94 (MQ=60)
CGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAAC < SRR4302537.2128950/94‑1 (MQ=60)
CGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAAC > SRR4302537.3405375/1‑94 (MQ=60)
CGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAAC > SRR4302537.231744/1‑94 (MQ=60)
CGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGAGCACCGAGAGCGTGGTCGATGGTggcaaccacccacg > SRR4302537.4185104/1‑80 (MQ=60)
CCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGT > SRR4302537.2159696/1‑94 (MQ=60)
CCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGT > SRR4302537.6327803/1‑94 (MQ=60)
CCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGT > SRR4302537.5465125/1‑94 (MQ=60)
CATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTG < SRR4302537.981442/94‑1 (MQ=60)
TACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCG < SRR4302537.2545593/94‑1 (MQ=60)
TACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCG > SRR4302537.2734739/1‑94 (MQ=60)
TACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCG < SRR4302537.4997474/94‑1 (MQ=60)
ACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGG < SRR4302537.825669/94‑1 (MQ=60)
CAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGG < SRR4302537.4330948/94‑1 (MQ=60)
AGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGG > SRR4302537.3590834/1‑94 (MQ=60)
GCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGA < SRR4302537.2809237/94‑1 (MQ=60)
GCGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGA < SRR4302537.1650157/94‑1 (MQ=60)
CGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGAT < SRR4302537.1487013/94‑1 (MQ=60)
CGGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGAT < SRR4302537.2698389/94‑1 (MQ=60)
GGTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATA > SRR4302537.3940243/1‑94 (MQ=60)
GTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATAT < SRR4302537.5966452/94‑1 (MQ=60)
GTTCAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATAT < SRR4302537.306876/94‑1 (MQ=60)
CAGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCT < SRR4302537.1421312/94‑1 (MQ=60)
AGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTG < SRR4302537.3182934/94‑1 (MQ=60)
AGCAAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTG < SRR4302537.5301518/94‑1 (MQ=60)
CAAACGGGCAGTTGATATGGACCC‑C‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGG < SRR4302537.6404371/94‑1 (MQ=60)
AAACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGT > SRR4302537.1345132/1‑94 (MQ=60)
AACGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTC < SRR4302537.196611/94‑1 (MQ=60)
CGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGG < SRR4302537.4877258/94‑1 (MQ=60)
CGGGCAGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGG < SRR4302537.584010/94‑1 (MQ=60)
AGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCG < SRR4302537.4554395/94‑1 (MQ=60)
AGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCG > SRR4302537.1952128/1‑94 (MQ=60)
AGTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCG > SRR4302537.204152/1‑94 (MQ=60)
GTTGNTATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGG < SRR4302537.5337971/94‑1 (MQ=60)
GTTGATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGG > SRR4302537.3830964/1‑94 (MQ=60)
GATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAA > SRR4302537.123428/1‑94 (MQ=60)
ATATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAAT < SRR4302537.1294652/94‑1 (MQ=60)
ATGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGACAACGTGCGGGGCTATCCTGGGTCGGGGGCGGCAAGGA > SRR4302537.5472161/1‑94 (MQ=60)
TGGA‑CTCC‑CCCCCGCATGAAGCTTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAA < SRR4302537.6318260/94‑1 (MQ=60)
TGGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAA < SRR4302537.861310/94‑1 (MQ=60)
GGA‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAA < SRR4302537.5050203/94‑1 (MQ=60)
gtcgcC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAAT < SRR4302537.1473679/89‑1 (MQ=60)
A‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATA < SRR4302537.5785027/94‑1 (MQ=60)
A‑CTCC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATA < SRR4302537.5120928/94‑1 (MQ=60)
ctcC‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATAC > SRR4302537.4167099/4‑94 (MQ=60)
C‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGT > SRR4302537.4842228/1‑94 (MQ=60)
CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTG > SRR4302537.2214149/1‑94 (MQ=60)
CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTG > SRR4302537.3898563/1‑94 (MQ=60)
CCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGC < SRR4302537.2292016/94‑1 (MQ=60)
CCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT < SRR4302537.4511574/94‑1 (MQ=60)
CCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT > SRR4302537.4213617/1‑94 (MQ=60)
CGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTG < SRR4302537.5622934/94‑1 (MQ=60)
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ACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACAGCGGTTCAGCAAACGGGCAGTTGATATGGA‑CT‑C‑CCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGTG > NC_000913/2376710‑2376890
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
