Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,403,601 |
T→C |
intergenic (‑515/+122) |
b2288 ← / ← lrhA |
NADH dehydrogenase I chain A/NADH dehydrogenase transcriptional regulator, LysR family |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,403,601 | 0 | T | C | 100.0%
| 613.5
/ NA
| 174 | intergenic (‑515/+122) | b2288/lrhA | NADH dehydrogenase I chain A/NADH dehydrogenase transcriptional regulator, LysR family |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (88/86); total (88/86) |
Only 100 of 189 total aligned reads displayed.
ATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACAC > NC_000913/2403511‑2403690
|
aTTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGctt < 2:3889144/93‑1 (MQ=255)
aTTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGctt < 1:3271965/93‑1 (MQ=255)
aTTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGctt < 1:1705892/93‑1 (MQ=255)
aTTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGctt > 2:3774054/1‑93 (MQ=255)
ttttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGcttt < 2:402120/93‑1 (MQ=255)
ttttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGcttt < 1:1503234/93‑1 (MQ=255)
ttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGt > 2:3277595/1‑93 (MQ=255)
ttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGt > 1:4917898/1‑93 (MQ=255)
ttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTAc > 1:5768146/1‑93 (MQ=255)
tAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACg < 1:279106/93‑1 (MQ=255)
aaCATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGt > 1:5199117/1‑93 (MQ=255)
aCATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGtt > 2:1385617/1‑93 (MQ=255)
catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTc > 1:3220093/1‑93 (MQ=255)
catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTc > 2:5139394/1‑93 (MQ=255)
atcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCt > 1:4449324/1‑93 (MQ=255)
catTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGc > 1:3184415/1‑93 (MQ=255)
atTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCa > 1:4110780/1‑93 (MQ=255)
ttGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCAc > 2:3749800/1‑93 (MQ=255)
ttGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCAc < 1:3221656/93‑1 (MQ=255)
ttGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCAc < 2:6414315/93‑1 (MQ=255)
gTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTa < 2:4636918/93‑1 (MQ=255)
gTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTa > 1:3884423/1‑93 (MQ=255)
tAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAt < 2:2191216/93‑1 (MQ=255)
tAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAt < 1:773238/93‑1 (MQ=255)
tAGCAGGGGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAt > 1:4875415/1‑93 (MQ=255)
gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGc < 2:2021499/93‑1 (MQ=255)
gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGc > 1:4716241/1‑93 (MQ=255)
gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGc > 2:875513/1‑93 (MQ=255)
gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGc < 2:5319411/93‑1 (MQ=255)
aGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGa < 2:126634/93‑1 (MQ=255)
aGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGa < 1:6174335/93‑1 (MQ=255)
aGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGa < 2:6175979/93‑1 (MQ=255)
ggTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGAt > 2:4459151/1‑93 (MQ=255)
ggTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGAt < 1:707130/93‑1 (MQ=255)
ggTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGAt > 2:5291404/1‑93 (MQ=255)
tGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGa < 2:1551455/93‑1 (MQ=255)
aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAg < 2:5894584/93‑1 (MQ=255)
aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAg < 2:3850192/93‑1 (MQ=255)
tttttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAgg > 1:784804/1‑93 (MQ=255)
tttttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAgg < 1:1748107/93‑1 (MQ=255)
tttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGAt < 1:2943545/93‑1 (MQ=255)
tttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGAt < 2:4393269/93‑1 (MQ=255)
ttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGAtt > 1:6060654/1‑93 (MQ=255)
ttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGAtttt > 1:2022546/1‑93 (MQ=255)
cAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTa > 1:4331935/1‑93 (MQ=255)
ggCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACt > 1:2620496/1‑93 (MQ=255)
ggCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACt > 2:4222318/1‑93 (MQ=255)
gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaa > 2:1038015/1‑93 (MQ=255)
gATTATTTGTGCCTTCGGGACGTGACTCTCTGGTGGTTCAAAAATGAACAGCTTTGTCCCTTCTGCTCTATGCGATGAAGGATTTTTCCTaaa < 1:5069893/93‑1 (MQ=255)
attattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaa < 2:3819491/93‑1 (MQ=255)
attattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaa > 1:3033269/1‑93 (MQ=255)
tattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaa > 2:3802035/1‑93 (MQ=255)
attTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaa > 1:108100/1‑93 (MQ=255)
attTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaa > 1:714711/1‑93 (MQ=255)
tttGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaaa < 2:1819521/93‑1 (MQ=255)
tgtgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGc < 2:5244865/93‑1 (MQ=255)
tgtgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGc < 1:5891796/93‑1 (MQ=255)
gtgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGcc > 1:601082/1‑93 (MQ=255)
gtgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGcc > 2:3107154/1‑93 (MQ=255)
gCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGc < 2:316723/93‑1 (MQ=255)
cGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCt < 1:1065303/93‑1 (MQ=255)
gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTg < 1:380344/93‑1 (MQ=255)
gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTg > 1:5535083/1‑93 (MQ=255)
gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTg > 2:2541633/1‑93 (MQ=255)
ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTgg > 1:1255911/1‑93 (MQ=255)
ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTgg < 2:4995902/93‑1 (MQ=255)
tCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTggg < 1:4434174/93‑1 (MQ=255)
cGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTgggg < 2:1434747/93‑1 (MQ=255)
ggACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGtt < 1:4633535/93‑1 (MQ=255)
cGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaa > 1:6406520/1‑93 (MQ=255)
cGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaa < 2:2320704/93‑1 (MQ=255)
gTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaaa < 2:1154696/93‑1 (MQ=255)
gTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaaa > 1:5260412/1‑93 (MQ=255)
tGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaaaa > 1:6428777/1‑93 (MQ=255)
tGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaaaa > 1:4493579/1‑93 (MQ=255)
gAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAac < 2:5690842/93‑1 (MQ=255)
aaTCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAaca < 2:4352838/93‑1 (MQ=255)
aaTCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAaca > 1:364583/1‑93 (MQ=255)
aaTCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAaca > 1:135350/1‑93 (MQ=255)
aTCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAacac < 2:3468418/93‑1 (MQ=255)
ctctGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAccc < 1:2250114/93‑1 (MQ=255)
tctGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcccc < 2:2489279/93‑1 (MQ=255)
tctGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcccc < 2:76981/93‑1 (MQ=255)
tctGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcccc > 2:3087287/1‑93 (MQ=255)
tggtggTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCa < 1:2853901/93‑1 (MQ=255)
ggtgttTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAg < 2:1654299/93‑1 (MQ=255)
ggtggtTGCAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAg > 2:6310902/1‑93 (MQ=255)
ggtggtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAg < 1:2242876/93‑1 (MQ=255)
ggtggtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAg < 2:4151369/93‑1 (MQ=255)
gtggtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGc < 1:115506/93‑1 (MQ=255)
gtggtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAAAACCCCCAGc > 2:3379477/1‑93 (MQ=255)
ggtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAAAACCCCCAGCgg > 2:4511738/1‑93 (MQ=255)
gtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGc > 1:4684679/1‑93 (MQ=255)
gtTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGc > 2:2632879/1‑93 (MQ=255)
gAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCg > 1:2412729/1‑93 (MQ=255)
gAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCg > 2:1437059/1‑93 (MQ=255)
aaaTGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt > 2:1401740/1‑93 (MQ=255)
aTGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt > 2:1760956/1‑93 (MQ=255)
aCAGTTTTGTCCGTTCTCCACTATGCGATGAAGAATTTTTACAAAAAAAAAGCCGCGGGGGTTAAAACCCCCCCCAGGGGCTCGTTTTTTaca < 2:4661041/93‑1 (MQ=255)
aaGTTTTTTCCTTTCTGCATTAGGCGATGAAGATTTTTTACAAAAAAAAACCCGCTGGGGTTAAAACCCCCCCCAGCGGCTCGTTTTTTacac < 2:5768146/92‑1 (MQ=255)
|
ATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACAC > NC_000913/2403511‑2403690
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAT > NC_000913/2403509‑2403693
|
GTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCT > SRR4302537.1504080/1‑94 (MQ=60)
ATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTT < SRR4302537.3295060/94‑1 (MQ=60)
ATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTT < SRR4302537.1717818/94‑1 (MQ=60)
ATTTTTTAACAGCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTT < SRR4302537.5028268/94‑1 (MQ=60)
TTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTG < SRR4302537.1513726/94‑1 (MQ=60)
TTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGT < SRR4302537.4689446/94‑1 (MQ=60)
TTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGT > SRR4302537.4951826/1‑94 (MQ=60)
TTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTA < SRR4302537.4726066/94‑1 (MQ=60)
TTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTAC < SRR4302537.1432440/94‑1 (MQ=60)
TTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTAC < SRR4302537.6086637/94‑1 (MQ=60)
TTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTAC > SRR4302537.5807679/1‑94 (MQ=60)
TTTAACATCATTGTAGCAGGTGATTGTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTAC < SRR4302537.2429327/94‑1 (MQ=60)
TAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGT < SRR4302537.281051/94‑1 (MQ=60)
TAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGT > SRR4302537.5234884/1‑94 (MQ=60)
AACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTT < SRR4302537.2659228/94‑1 (MQ=60)
AACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTT > SRR4302537.1940798/1‑94 (MQ=60)
ACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTC > SRR4302537.3242754/1‑94 (MQ=60)
CATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCT > SRR4302537.4480051/1‑94 (MQ=60)
TCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGC < SRR4302537.3160772/94‑1 (MQ=60)
TCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGC < SRR4302537.3878296/94‑1 (MQ=60)
TCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGC > SRR4302537.3206804/1‑94 (MQ=60)
CATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCA > SRR4302537.4139496/1‑94 (MQ=60)
CATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCA < SRR4302537.2815190/94‑1 (MQ=60)
TTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACT < SRR4302537.3244325/94‑1 (MQ=60)
TGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTA > SRR4302537.3911591/1‑94 (MQ=60)
GTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAT < SRR4302537.3456858/94‑1 (MQ=60)
GTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAT > SRR4302537.6373762/1‑94 (MQ=60)
GTAGCAGGGGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTAT > SRR4302537.4909067/1‑94 (MQ=60)
TAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATG < SRR4302537.1285019/94‑1 (MQ=60)
TAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATG < SRR4302537.744100/94‑1 (MQ=60)
TAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATG < SRR4302537.778536/94‑1 (MQ=60)
AGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGC > SRR4302537.4748856/1‑94 (MQ=60)
AGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGAT < SRR4302537.6216858/94‑1 (MQ=60)
GGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATG < SRR4302537.711969/94‑1 (MQ=60)
ATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGG > SRR4302537.790191/1‑94 (MQ=60)
TTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGA < SRR4302537.1760301/94‑1 (MQ=60)
TTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATT < SRR4302537.2964207/94‑1 (MQ=60)
TTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATT > SRR4302537.6102291/1‑94 (MQ=60)
TTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTT < SRR4302537.3030716/94‑1 (MQ=60)
TTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTT > SRR4302537.2036656/1‑94 (MQ=60)
TCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTA > SRR4302537.4362024/1‑94 (MQ=60)
CAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTAC < SRR4302537.4656052/94‑1 (MQ=60)
AGTCGATTATTTGTGCGTTCGGGACGTGAATCTCTGTTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACT < SRR4302537.92722/94‑1 (MQ=60)
AGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACT > SRR4302537.2927079/1‑94 (MQ=60)
AGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACT > SRR4302537.2638815/1‑94 (MQ=60)
CGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAA > SRR4302537.574269/1‑94 (MQ=60)
CGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAA < SRR4302537.3245638/94‑1 (MQ=60)
CGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAA < SRR4302537.6119094/94‑1 (MQ=60)
CGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAA > SRR4302537.1257414/1‑94 (MQ=60)
GATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAA > SRR4302537.3054417/1‑94 (MQ=60)
GATTATTTGTGCCTTCGGGACGTGACTCTCTGGTGGTTCAAAAATGAACAGCTTTGTCCCTTCTGCTCTATGCGATGAAGGATTTTTCCTAAAA < SRR4302537.5104794/94‑1 (MQ=60)
TATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAACAA > SRR4302537.4327755/1‑94 (MQ=60)
TATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAA > SRR4302537.719598/1‑94 (MQ=60)
TATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAA > SRR4302537.108891/1‑94 (MQ=60)
ATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAA > SRR4302537.4085503/1‑94 (MQ=60)
ATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAA > SRR4302537.5260704/1‑94 (MQ=60)
TTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGC > SRR4302537.4471391/1‑94 (MQ=60)
TGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCC > SRR4302537.605193/1‑94 (MQ=60)
TGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCC < SRR4302537.5932222/94‑1 (MQ=60)
GTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCG > SRR4302537.371549/1‑94 (MQ=60)
GTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCG < SRR4302537.5834873/94‑1 (MQ=60)
GCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCT < SRR4302537.491898/94‑1 (MQ=60)
CGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTG > SRR4302537.5572864/1‑94 (MQ=60)
CGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTG < SRR4302537.1072640/94‑1 (MQ=60)
CGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTG < SRR4302537.2587518/94‑1 (MQ=60)
GTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGG < SRR4302537.382980/94‑1 (MQ=60)
GTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGG > SRR4302537.1264646/1‑94 (MQ=60)
TCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGG < SRR4302537.4464792/94‑1 (MQ=60)
GGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTT > SRR4302537.1160662/1‑94 (MQ=60)
GGACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTT < SRR4302537.4665586/94‑1 (MQ=60)
GACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTA > SRR4302537.324196/1‑94 (MQ=60)
ACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAA > SRR4302537.6450123/1‑94 (MQ=60)
ACGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAA > SRR4302537.1686000/1‑94 (MQ=60)
CGTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAA > SRR4302537.5296607/1‑94 (MQ=60)
GTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAA > SRR4302537.6472458/1‑94 (MQ=60)
GTGAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAA > SRR4302537.4524666/1‑94 (MQ=60)
GAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACA > SRR4302537.4757184/1‑94 (MQ=60)
GAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACA > SRR4302537.367117/1‑94 (MQ=60)
GAATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACA > SRR4302537.136316/1‑94 (MQ=60)
ATCTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACC > SRR4302537.6461331/1‑94 (MQ=60)
CTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCC < SRR4302537.2265999/94‑1 (MQ=60)
CTCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCC > SRR4302537.788304/1‑94 (MQ=60)
TCTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCC < SRR4302537.684014/94‑1 (MQ=60)
CTGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCA > SRR4302537.2116539/1‑94 (MQ=60)
TGGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAG < SRR4302537.2873903/94‑1 (MQ=60)
GGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGC > SRR4302537.5122451/1‑94 (MQ=60)
GGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGC < SRR4302537.4395027/94‑1 (MQ=60)
GGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGC > SRR4302537.6031719/1‑94 (MQ=60)
GGTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGC < SRR4302537.2258693/94‑1 (MQ=60)
GTGGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCG < SRR4302537.116343/94‑1 (MQ=60)
GGTTGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGC > SRR4302537.4717085/1‑94 (MQ=60)
TGAAAAATGAACAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCG > SRR4302537.2429713/1‑94 (MQ=60)
CAGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACT < SRR4302537.1741971/94‑1 (MQ=60)
AGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTA > SRR4302537.402857/1‑94 (MQ=60)
AGCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTA > SRR4302537.5192581/1‑94 (MQ=60)
GCTTTGTCCGTTCTGCACTATGCGATGAAGGTTTTTTACAAAAAAAAGCCCGCTGGGTTTAAAACCCCCCCCGGCGGCTCGTTTTTTACACTAT < SRR4302537.2374788/94‑1 (MQ=38)
GCTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCccttttttcaatat > SRR4302537.4535447/1‑80 (MQ=60)
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GTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAT > NC_000913/2403509‑2403693
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
