Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,548,093 |
G→A |
A158V (GCG→GTG) |
b2431 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,548,093 | 0 | G | A | 97.2%
| 597.2
/ 1.7
| 181 | A158V (GCG→GTG) | b2431 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (1/4); new base A (101/74); total (102/79) |
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 |
Only 100 of 204 total aligned reads displayed.
ACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCG > NC_000913/2548003‑2548182
|
cGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAAccacca < 2:4800938/93‑1 (MQ=255)
gCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACcaccac > 1:6042752/1‑93 (MQ=255)
ccTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACcaccac < 2:2613179/92‑1 (MQ=255)
cTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACt > 2:5650452/1‑93 (MQ=255)
cTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACt < 1:303168/93‑1 (MQ=255)
tCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACtt < 1:3089875/93‑1 (MQ=255)
cATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTc < 1:2284117/93‑1 (MQ=255)
aTCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTcg > 1:2567838/1‑93 (MQ=255)
tCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTcgc > 1:1460848/1‑93 (MQ=255)
tCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTcgc < 2:6058377/93‑1 (MQ=255)
ccGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTcgcg > 2:2773503/1‑93 (MQ=255)
cGGTTGAGCTTCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGa < 1:198925/93‑1 (MQ=255)
cGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGa < 2:3597746/93‑1 (MQ=255)
cGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGa < 2:586557/93‑1 (MQ=255)
cGGTTGAGCTGCTTCAGGTGGTGTTCCCAACGCTGGACAAACACATAGCTGCCTCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGa < 2:2917758/93‑1 (MQ=255)
ggTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAc < 2:313880/93‑1 (MQ=255)
ggTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAc < 2:3171615/93‑1 (MQ=255)
gTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAcg > 2:1006699/1‑93 (MQ=255)
ttGAGCTGCTTCAGTTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAcgc < 2:5434345/93‑1 (MQ=255)
ttGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAcgc < 1:1686438/93‑1 (MQ=255)
ttGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAcgc > 1:2925216/1‑93 (MQ=255)
tGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAcgcg < 1:5160753/93‑1 (MQ=255)
tGAGCTGCTTCAGGTTGTGTTCCCAACGATGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAAACACCACTTCGCGAcgcg > 2:3329848/1‑93 (MQ=255)
gAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGt > 1:4020111/1‑93 (MQ=255)
aGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGtc < 2:142106/93‑1 (MQ=255)
gctgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGtct > 2:1482796/1‑93 (MQ=255)
gctgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGtct > 2:3798003/1‑93 (MQ=255)
ctgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGtctc < 2:4552588/93‑1 (MQ=255)
ctgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGtctc < 2:2026931/93‑1 (MQ=255)
ctgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGtctc > 1:5811017/1‑93 (MQ=255)
tgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTctct < 1:2689434/93‑1 (MQ=255)
tgctTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTctct < 1:153911/93‑1 (MQ=255)
ttCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCa > 1:3779074/1‑93 (MQ=255)
ttCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCa > 1:757833/1‑93 (MQ=255)
ttCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCa > 1:584859/1‑93 (MQ=255)
tCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCAc > 2:2134039/1‑93 (MQ=255)
gTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACccgc < 1:6259337/93‑1 (MQ=255)
tgtgTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACccgccg > 2:1550382/1‑93 (MQ=255)
tgtgTCCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACccgccg < 2:4417524/93‑1 (MQ=255)
gtgtTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCgg > 1:2998895/1‑93 (MQ=255)
ttCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGtt < 1:930391/93‑1 (MQ=255)
cAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTcc > 2:5905124/1‑93 (MQ=255)
cAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTcc > 2:6133031/1‑93 (MQ=255)
cGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTa < 1:5499423/93‑1 (MQ=255)
cGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTa < 2:3035194/93‑1 (MQ=255)
cGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTa < 2:3414577/93‑1 (MQ=255)
gCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACTCGTCTCTTCACCCGCCGGGTTTTCCGTAc > 1:4896522/1‑93 (MQ=255)
tGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCg > 2:2154309/1‑93 (MQ=255)
tGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCg < 2:5061613/93‑1 (MQ=255)
tGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCg > 2:651424/1‑93 (MQ=255)
tGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCg < 2:4122651/93‑1 (MQ=255)
gACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTc > 1:5654146/1‑93 (MQ=255)
cAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTcaa < 1:1825597/93‑1 (MQ=255)
aaaCACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATGACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTcaac > 1:2725772/1‑93 (MQ=255)
aaaCACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTcaac > 2:2360900/1‑93 (MQ=255)
aaCACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTcaaca < 2:4654205/93‑1 (MQ=255)
aaCACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTcaaca < 1:6048911/93‑1 (MQ=255)
aaCACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGCTTTCCGTACCGTccaca > 1:215027/1‑93 (MQ=255)
acttAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAg < 1:3904438/90‑1 (MQ=255)
caTAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGc > 1:990912/1‑93 (MQ=255)
aGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGc < 2:3887326/93‑1 (MQ=255)
aGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGc < 1:6400962/93‑1 (MQ=255)
gCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCt > 1:4513532/1‑93 (MQ=255)
cTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTc < 1:5871075/93‑1 (MQ=255)
tGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCa > 1:1088291/1‑93 (MQ=255)
ccgcccgcATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAgg > 2:6194154/1‑93 (MQ=255)
cgcccgcATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGt < 2:405868/93‑1 (MQ=255)
cgcccgcATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGt > 2:5309094/1‑93 (MQ=255)
cgcccgcATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGt > 1:4343446/1‑93 (MQ=255)
cgcccgcATCCACGCCGTCTTGGATATCCCCCACTTCGCGACGTGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGt < 2:6379445/93‑1 (MQ=255)
cccgcATCCACGCCGTCTTTGATAACCACCACTGCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCa < 2:845378/93‑1 (MQ=255)
cATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGct < 2:772308/93‑1 (MQ=255)
aTCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGctc > 2:6332223/1‑93 (MQ=255)
aTCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGctc < 1:2387574/93‑1 (MQ=255)
tCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGctct < 2:625119/93‑1 (MQ=255)
ccACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCtt < 2:5357597/93‑1 (MQ=255)
ccACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCtt > 2:2339946/1‑93 (MQ=255)
cACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTc < 1:5313883/93‑1 (MQ=255)
cACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTc > 2:529863/1‑93 (MQ=255)
ccGCCGTCTTTGTTACCCACCGCTTCGCGACGTGTCTCTTCACCCGCCGGGTTTTCCGTTCCGTCACCAAAGCCGCTCAGGTCACGCTCTTCa < 1:1230535/92‑1 (MQ=255)
aCGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCa > 1:5713013/1‑93 (MQ=255)
aCGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCa > 2:3630526/1‑93 (MQ=255)
ccGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAAcc < 2:5672369/93‑1 (MQ=255)
tCTTTGATAACCACCACTTCGCGANGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCaa < 2:1718120/93‑1 (MQ=255)
cTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAAc > 2:603599/1‑93 (MQ=255)
tttGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACg > 2:4989091/1‑93 (MQ=255)
tttGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACg > 1:2784129/1‑93 (MQ=255)
tttGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACg > 1:776450/1‑93 (MQ=255)
ttggATACCCACCTCTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACg < 1:3693087/90‑1 (MQ=255)
ttGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACgg > 2:2512379/1‑93 (MQ=255)
gATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGaa < 2:4822249/93‑1 (MQ=255)
gATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGaa < 1:2189909/93‑1 (MQ=255)
gATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCACTTCAACCCAACGGaa > 2:1880027/1‑93 (MQ=255)
aTAGCCTCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAg < 1:3265430/93‑1 (MQ=255)
aaCCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGcc > 2:4021957/1‑93 (MQ=255)
aaCCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGcc < 2:4025954/93‑1 (MQ=255)
aaCCACCACTTCGCGACGCGTCTCTTAACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGcc < 2:5221137/93‑1 (MQ=255)
accaccACTTCGCGACGCGTCTCTTCGCCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCg < 1:4427288/93‑1 (MQ=255)
accaccACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCCACCCAACGGAAGCCg > 2:6239330/1‑93 (MQ=255)
accaccACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCg < 1:3817194/93‑1 (MQ=255)
|
ACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCG > NC_000913/2548003‑2548182
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGAACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGG > NC_000913/2548000‑2548185
|
GGAACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCA < SRR4302537.789107/94‑1 (MQ=60)
GAACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCAC > SRR4302537.5677928/1‑94 (MQ=60)
ACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCA < SRR4302537.1173282/94‑1 (MQ=60)
ACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCA > SRR4302537.4850230/1‑94 (MQ=60)
CGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCAC > SRR4302537.6084259/1‑94 (MQ=60)
CGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCAC < SRR4302537.684406/94‑1 (MQ=60)
CTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTT < SRR4302537.305278/94‑1 (MQ=60)
CTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTT > SRR4302537.6396510/1‑94 (MQ=60)
CTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTT > SRR4302537.6169048/1‑94 (MQ=60)
TCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTC < SRR4302537.3111424/94‑1 (MQ=60)
TCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTC > SRR4302537.2180020/1‑94 (MQ=60)
CATCCTGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCG < SRR4302537.1489047/94‑1 (MQ=60)
CATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCG < SRR4302537.2300230/94‑1 (MQ=60)
CATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCG > SRR4302537.2585829/1‑94 (MQ=60)
CATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCG > SRR4302537.3012297/1‑94 (MQ=60)
ATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGC > SRR4302537.4234027/1‑94 (MQ=60)
ATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGC > SRR4302537.3400078/1‑94 (MQ=60)
ATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGC > SRR4302537.1471013/1‑94 (MQ=60)
ATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGC > SRR4302537.2737443/1‑94 (MQ=60)
CGGTTGAGCTTCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAC < SRR4302537.200343/94‑1 (MQ=60)
CGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGAC > SRR4302537.3031947/1‑94 (MQ=60)
GTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGC > SRR4302537.2945761/1‑94 (MQ=60)
TTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCG < SRR4302537.1698247/94‑1 (MQ=60)
TGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGT < SRR4302537.5196334/94‑1 (MQ=60)
TGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGT > SRR4302537.4048256/1‑94 (MQ=60)
AGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCT < SRR4302537.999979/94‑1 (MQ=60)
AGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCT > SRR4302537.4404652/1‑94 (MQ=60)
GCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTC > SRR4302537.5850856/1‑94 (MQ=60)
TGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTT < SRR4302537.155009/94‑1 (MQ=60)
TGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTT < SRR4302537.2708203/94‑1 (MQ=60)
GCTGCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATACCCACCACTTCGCGACGCGTCTCTTC < SRR4302537.3231786/94‑1 (MQ=60)
CTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCA > SRR4302537.763007/1‑94 (MQ=60)
CTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCA > SRR4302537.3805612/1‑94 (MQ=60)
CTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCA > SRR4302537.588851/1‑94 (MQ=60)
TCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACC < SRR4302537.2350445/94‑1 (MQ=60)
CAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCC < SRR4302537.3720583/94‑1 (MQ=60)
CAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCC < SRR4302537.1983874/94‑1 (MQ=60)
AGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCG > SRR4302537.3905230/1‑94 (MQ=60)
AGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCG > SRR4302537.28645/1‑94 (MQ=60)
GTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCC > SRR4302537.2514263/1‑94 (MQ=60)
GTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCC < SRR4302537.6302317/94‑1 (MQ=60)
TTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCG > SRR4302537.5879581/1‑94 (MQ=60)
TGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGG > SRR4302537.3019801/1‑94 (MQ=60)
GTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTT < SRR4302537.5444371/94‑1 (MQ=60)
TTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTT < SRR4302537.936803/94‑1 (MQ=60)
CCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTC > SRR4302537.1420738/1‑94 (MQ=60)
CCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTC > SRR4302537.5047268/1‑94 (MQ=60)
CCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCC > SRR4302537.4366977/1‑94 (MQ=60)
CGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACTCGTCTCTTCACCCGCCGGGTTTTCCGTAC > SRR4302537.4930325/1‑94 (MQ=60)
CGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTAC > SRR4302537.4459971/1‑94 (MQ=60)
CGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTAC < SRR4302537.5536977/94‑1 (MQ=60)
GGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTC > SRR4302537.5692839/1‑94 (MQ=60)
GACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCA > SRR4302537.5744345/1‑94 (MQ=60)
CAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATGACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAAC > SRR4302537.2744807/1‑94 (MQ=60)
CAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAAC < SRR4302537.1838321/94‑1 (MQ=60)
AAACATATATCCGCCGCCCGCGTCCACGCCGTCTTTGATAACCACCGCTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACA < SRR4302537.3760081/94‑1 (MQ=60)
AAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGCTTTCCGTACCGTCCACA > SRR4302537.216563/1‑94 (MQ=60)
AACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAA < SRR4302537.6090453/94‑1 (MQ=60)
ACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAA > SRR4302537.1589254/1‑94 (MQ=60)
CCATAGCTCCCGCCCGCATCCACGCCGTCTTTGATAACCCCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGC < SRR4302537.2048971/94‑1 (MQ=60)
ACTTAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGC < SRR4302537.3931736/94‑1 (MQ=60)
ACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGC > SRR4302537.997758/1‑94 (MQ=60)
ACACAGCTGCCGCCCGCATCCACGCCGTCTTTGATACCCCCCCCTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGC < SRR4302537.4672726/94‑1 (MQ=60)
TAGCTGCCGCCCGCATCCTCGTCGTCTTTGATAACCCCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGC < SRR4302537.3309746/94‑1 (MQ=60)
AGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCT > SRR4302537.4544743/1‑94 (MQ=60)
AGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCT < SRR4302537.6087682/94‑1 (MQ=60)
AGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCT < SRR4302537.6444537/94‑1 (MQ=60)
CTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCA < SRR4302537.5911347/94‑1 (MQ=60)
CTGCCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCA > SRR4302537.1095807/1‑94 (MQ=60)
GCCGCCCGCATCCACGCCGTCTTTGATATCCACCCCTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGG < SRR4302537.521214/94‑1 (MQ=60)
CCGCCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGT > SRR4302537.4373567/1‑94 (MQ=60)
CCCGCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCAC > SRR4302537.5662563/1‑94 (MQ=60)
CCCGCATCCACGCCGTCTTTGATAACCACCACTCCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCAC < SRR4302537.5809875/94‑1 (MQ=60)
GCATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCT > SRR4302537.3983112/1‑94 (MQ=60)
ATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCT < SRR4302537.2404392/94‑1 (MQ=60)
ATCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCT > SRR4302537.771129/1‑94 (MQ=60)
tccctGCCGTCTTTGATAACCCCCACTTCGCGACGCGTCTCTTCCCCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTT < SRR4302537.5423114/89‑1 (MQ=60)
TCCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTT > SRR4302537.1738162/1‑94 (MQ=60)
CCACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTC > SRR4302537.5938145/1‑94 (MQ=60)
CACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCA < SRR4302537.5350378/94‑1 (MQ=60)
CACGCCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCA > SRR4302537.5752113/1‑94 (MQ=60)
CCGCCGTCTTTGTTACCCACCGCTTCGCGACGTGTCTCTTCACCCGCCGGGTTTTCCGTTCCGTCACCAAAGCCGCTCAGGTCACGCTCTTCAA < SRR4302537.1239092/94‑1 (MQ=60)
CCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCC > SRR4302537.991576/1‑94 (MQ=60)
CCGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCCCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCC > SRR4302537.5901047/1‑94 (MQ=60)
CGTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCA > SRR4302537.3075179/1‑94 (MQ=60)
GTCTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAA > SRR4302537.2803138/1‑94 (MQ=60)
CTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACG < SRR4302537.268814/94‑1 (MQ=60)
CTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACG > SRR4302537.781776/1‑94 (MQ=60)
CTTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACG > SRR4302537.2803592/1‑94 (MQ=60)
TTTGATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGG < SRR4302537.2276409/94‑1 (MQ=60)
TGATACCCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAA < SRR4302537.3828653/94‑1 (MQ=60)
GATAACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAG < SRR4302537.2205335/94‑1 (MQ=60)
ATAGCCTCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGC < SRR4302537.3288464/94‑1 (MQ=60)
ACCACCACTTCGCGACGCGTCTCTTCGCCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGT < SRR4302537.4457866/94‑1 (MQ=60)
ACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGT < SRR4302537.3843963/94‑1 (MQ=60)
ACCACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGT < SRR4302537.874940/94‑1 (MQ=60)
CACCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGG < SRR4302537.53621/94‑1 (MQ=60)
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TGAACGCTCATCCGGTTGAGCTGCTTCAGGTTGTGTTCCCAACGCTGGACAAACACATAGCTGCCGCCCGCATCCACGCCGTCTTTGATAACCGCCACTTCGCGACGCGTCTCTTCACCCGCCGGGTTTTCCGTACCGTCAACAAAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGG > NC_000913/2548000‑2548185
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
