Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,548,787	A→G	C150C (TGT→TGC)	b2432 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,548,787	0	A	G	99.5%	1432.5 / ‑4.1	408	C150C (TGT→TGC)	b2432	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (209/197); total (211/197)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 414 total aligned reads displayed.

TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTA  >  NC_000913/2548696‑2548877

 tttCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCAt                                                                                         >  1:708518/1‑94 (MQ=255)

    cAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGCACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCg                                                                                      >  2:2380611/1‑94 (MQ=255)

    cAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCg                                                                                      >  1:697348/1‑94 (MQ=255)

    cAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCg                                                                                      >  2:883582/1‑94 (MQ=255)

     aGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGa                                                                                     >  2:5462318/1‑94 (MQ=255)

       ggTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACg                                                                                   >  2:3138748/1‑94 (MQ=255)

        gTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACgg                                                                                  <  2:9846463/94‑1 (MQ=255)

        gTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACgg                                                                                  >  2:2412321/1‑94 (MQ=255)

          aTCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCa                                                                                >  2:1498105/1‑94 (MQ=255)

           tCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAc                                                                               <  1:5550032/94‑1 (MQ=255)

             gTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGa                                                                             >  2:6304563/1‑94 (MQ=255)

                cGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTa                                                                          >  2:2457985/1‑94 (MQ=255)

                cGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTa                                                                          >  2:7852604/1‑94 (MQ=255)

                cGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTa                                                                          >  1:3632225/1‑94 (MQ=255)

                 gAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTat                                                                         >  2:3535598/1‑94 (MQ=255)

                 gAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTat                                                                         >  2:1088356/1‑94 (MQ=255)

                 gAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTat                                                                         >  1:7569182/1‑94 (MQ=255)

                   aGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatca                                                                       <  1:2706486/94‑1 (MQ=255)

                     gCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatcatc                                                                     <  2:1141736/94‑1 (MQ=255)

                     gCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGAAGCTAATATGTTGACTACCTTCGGCTTTGCATTCGACGGCACGATTatcatc                                                                     >  1:6059667/1‑94 (MQ=255)

                       aTTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAc                                                                   >  1:10335593/1‑94 (MQ=255)

                       aTTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAc                                                                   >  2:8473923/1‑94 (MQ=255)

                          aaCCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCAt                                                                >  1:8246262/1‑94 (MQ=255)

                            cccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa                                                              >  2:4930998/1‑94 (MQ=255)

                            accTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa                                                              <  1:7941836/93‑1 (MQ=255)

                             ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAg                                                             <  2:6155486/94‑1 (MQ=255)

                             ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAg                                                             <  1:8533366/94‑1 (MQ=255)

                              cTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGc                                                            <  2:2271213/94‑1 (MQ=255)

                              cTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGc                                                            <  1:3466995/94‑1 (MQ=255)

                               ttCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCt                                                           <  2:2586968/94‑1 (MQ=255)

                               ttCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCt                                                           >  1:8628889/1‑94 (MQ=255)

                                tCAGGACCACGCCATTCCCCGCTGCACTGGTAGCTAATCTGTTGCCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATTACCATCAGCtt                                                          >  1:1886960/1‑94 (MQ=255)

                                tCAGGACCACGCCATTCCCCGCTGAGCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCtt                                                          <  1:9739697/94‑1 (MQ=255)

                                 cAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCttt                                                         <  2:7150827/94‑1 (MQ=255)

                                  aGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCtttt                                                        <  1:2987644/94‑1 (MQ=255)

                                   ggACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCttttt                                                       <  1:1051685/94‑1 (MQ=255)

                                   ggACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCttttt                                                       <  1:9926878/94‑1 (MQ=255)

                                    gACCCCGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTg                                                      <  1:8081692/94‑1 (MQ=255)

                                    gACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTg                                                      <  2:5721741/94‑1 (MQ=255)

                                      ccACGCTATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGc                                                    <  2:9317007/94‑1 (MQ=255)

                                       cACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCa                                                   <  2:7785772/94‑1 (MQ=255)

                                       cACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTCGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCa                                                   >  2:5644183/1‑94 (MQ=255)

                                        aCGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCaa                                                  >  1:4136213/1‑94 (MQ=255)

                                        aCGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCaa                                                  >  2:10292597/1‑94 (MQ=255)

                                          gCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAtt                                                >  1:6774095/1‑94 (MQ=255)

                                          gCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAtt                                                >  2:4075372/1‑94 (MQ=255)

                                           ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTg                                               <  2:4684289/94‑1 (MQ=255)

                                           ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTg                                               >  1:9480625/1‑94 (MQ=255)

                                           ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTg                                               <  2:5290095/94‑1 (MQ=255)

                                            cATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGc                                              <  2:5955481/94‑1 (MQ=255)

                                             aTTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGcc                                             <  1:4701950/94‑1 (MQ=255)

                                             aTTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGcc                                             <  2:1983530/94‑1 (MQ=255)

                                                ccccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCaaa                                          >  2:9540899/1‑94 (MQ=255)

                                                ccccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCaaa                                          >  1:9260870/1‑94 (MQ=255)

                                                 cccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAt                                         <  1:2915125/94‑1 (MQ=255)

                                                    gCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCt                                      >  1:5379523/1‑94 (MQ=255)

                                                    gCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCt                                      >  1:1110121/1‑94 (MQ=255)

                                                     cTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCtt                                     >  2:418709/1‑94 (MQ=255)

                                                      tGAACTGGTAGCTAATATGTTGACTGCCTTCGTCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCttt                                    <  1:10154108/94‑1 (MQ=255)

                                                      tGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCttt                                    >  2:7690047/1‑94 (MQ=255)

                                                       gAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTg                                   <  1:6877820/94‑1 (MQ=255)

                                                        aaCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGAACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGc                                  >  1:5700602/1‑94 (MQ=255)

                                                          cTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTg                                >  1:4399982/1‑94 (MQ=255)

                                                          cTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTg                                >  1:8833168/1‑94 (MQ=255)

                                                          cTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTg                                <  1:7533511/94‑1 (MQ=255)

                                                           tGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGt                               >  2:6741996/1‑94 (MQ=255)

                                                           tGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGt                               <  2:5077318/94‑1 (MQ=255)

                                                              tAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTaaa                            >  1:2651705/1‑94 (MQ=255)

                                                               aGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAg                           <  2:6365319/94‑1 (MQ=255)

                                                                 cTAATATGTTGTCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGt                         <  1:2126577/94‑1 (MQ=255)

                                                                 cTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGt                         <  2:3844227/94‑1 (MQ=255)

                                                                 cTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGt                         >  1:6655293/1‑94 (MQ=255)

                                                                      atGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTa                    <  1:3901464/94‑1 (MQ=255)

                                                                      atGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTa                    >  1:8687233/1‑94 (MQ=255)

                                                                      atGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTa                    >  2:1752760/1‑94 (MQ=255)

                                                                       tGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCACCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTaa                   >  2:7479333/1‑94 (MQ=255)

                                                                        gTTGTCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTaaa                  <  1:2335167/94‑1 (MQ=255)

                                                                         ttGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAc                 <  1:16935/94‑1 (MQ=255)

                                                                         ttGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAc                 <  2:2853400/94‑1 (MQ=255)

                                                                          tGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTACACg                >  2:6539367/1‑94 (MQ=255)

                                                                          tGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACg                >  2:8928651/1‑94 (MQ=255)

                                                                          tGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACg                <  1:4857162/94‑1 (MQ=255)

                                                                          tGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATAAGCTTTTGGGCACTTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACg                >  2:4505559/1‑94 (MQ=255)

                                                                           gACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACgg               >  2:6936902/1‑94 (MQ=255)

                                                                            gcTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgt              <  2:2093999/93‑1 (MQ=255)

                                                                            aCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgt              <  2:4280057/94‑1 (MQ=255)

                                                                              tGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgtgt            <  1:6181969/94‑1 (MQ=255)

                                                                               gCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTa           <  1:1262990/94‑1 (MQ=255)

                                                                                ccTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAc          >  1:52080/1‑94 (MQ=255)

                                                                                ccTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAc          >  1:3050970/1‑94 (MQ=255)

                                                                                 cTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAcc         >  2:334085/1‑94 (MQ=255)

                                                                                 cTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAcc         >  2:9231600/1‑94 (MQ=255)

                                                                                 cTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAcc         >  2:7280795/1‑94 (MQ=255)

                                                                                  ttCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCg        <  2:6842506/94‑1 (MQ=255)

                                                                                    cGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGGGAACCGAt      >  1:2425142/1‑94 (MQ=255)

                                                                                     ggCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtt     >  2:8153942/1‑94 (MQ=255)

                                                                                     ggCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtt     >  2:3290460/1‑94 (MQ=255)

                                                                                      gCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAttt    <  2:9436087/94‑1 (MQ=255)

                                                                                       cTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGGCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtttt   >  1:5015260/1‑94 (MQ=255)

                                                                                       cTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATACTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtttt   >  2:10133964/1‑94 (MQ=255)

TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTA  >  NC_000913/2548696‑2548877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.

GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  NC_000913/2548694‑2548880

GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTG                                                                                               >  SRR4302545.5189093/1‑94 (MQ=60)

 TTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGC                                                                                              <  SRR4302545.2505411/94‑1 (MQ=60)

  TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGCACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCA                                                                                             >  SRR4302545.2810604/1‑94 (MQ=60)

  TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCA                                                                                             >  SRR4302545.4973001/1‑94 (MQ=60)

  TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCA                                                                                             >  SRR4302545.8792443/1‑94 (MQ=60)

   TTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCAT                                                                                            >  SRR4302545.724434/1‑94 (MQ=60)

    TTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATT                                                                                           >  SRR4302545.2178415/1‑94 (MQ=60)

     TCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTC                                                                                          <  SRR4302545.3002911/94‑1 (MQ=60)

      CAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCG                                                                                         <  SRR4302545.8062280/94‑1 (MQ=60)

      CAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCG                                                                                         >  SRR4302545.712989/1‑94 (MQ=60)

      CAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCG                                                                                         >  SRR4302545.712988/1‑94 (MQ=60)

       AGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGA                                                                                        >  SRR4302545.4289511/1‑94 (MQ=60)

       AGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGA                                                                                        >  SRR4302545.1106423/1‑94 (MQ=60)

       AGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGA                                                                                        >  SRR4302545.6895614/1‑94 (MQ=60)

        GGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGAC                                                                                       >  SRR4302545.3463461/1‑94 (MQ=60)

           TATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGC                                                                                    >  SRR4302545.1209548/1‑94 (MQ=60)

            ATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCA                                                                                   <  SRR4302545.10047349/94‑1 (MQ=60)

            ATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCA                                                                                   >  SRR4302545.8152931/1‑94 (MQ=60)

             TCGTCCGAAGGCATTAACCCTTCCGGACCACGCCATTCCCCGCTGAACTGGGAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAC                                                                                  <  SRR4302545.9035588/94‑1 (MQ=60)

             TCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAC                                                                                  <  SRR4302545.9035587/94‑1 (MQ=60)

             TCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAC                                                                                  <  SRR4302545.5696674/94‑1 (MQ=60)

              CGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACG                                                                                 <  SRR4302545.8438864/94‑1 (MQ=60)

               GTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGA                                                                                >  SRR4302545.10932776/1‑94 (MQ=60)

               GTCCGAAGGCATTAAACCTTCAGGACCACGCCATTAGCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGA                                                                                >  SRR4302545.1915395/1‑94 (MQ=60)

                 CCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATT                                                                              <  SRR4302545.3939376/94‑1 (MQ=60)

                 CCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATT                                                                              <  SRR4302545.2702282/94‑1 (MQ=60)

                 CCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATT                                                                              <  SRR4302545.2724679/94‑1 (MQ=60)

                 CCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATT                                                                              <  SRR4302545.31041/94‑1 (MQ=60)

                 CCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGCAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATT                                                                              >  SRR4302545.2259154/1‑94 (MQ=60)

                  CGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTA                                                                             >  SRR4302545.3720846/1‑94 (MQ=60)

                  CGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTA                                                                             >  SRR4302545.4834060/1‑94 (MQ=60)

                  CAAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTA                                                                             >  SRR4302545.3720845/1‑94 (MQ=60)

                   GAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTAT                                                                            >  SRR4302545.7783101/1‑94 (MQ=60)

                    AAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATC                                                                           <  SRR4302545.869419/94‑1 (MQ=60)

                     AGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCA                                                                          >  SRR4302545.4164654/1‑94 (MQ=60)

                     AGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCA                                                                          <  SRR4302545.7895981/94‑1 (MQ=60)

                     AGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCA                                                                          <  SRR4302545.2771681/94‑1 (MQ=60)

                       GCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATC                                                                        <  SRR4302545.4593510/94‑1 (MQ=60)

                       GCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGAAGCTAATATGTTGACTACCTTCGGCTTTGCATTCGACGGCACGATTATCATC                                                                        >  SRR4302545.6224079/1‑94 (MQ=60)

                        CATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCA                                                                       >  SRR4302545.3096660/1‑94 (MQ=60)

                         ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC                                                                      <  SRR4302545.5751631/94‑1 (MQ=60)

                         ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC                                                                      >  SRR4302545.625909/1‑94 (MQ=60)

                         ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC                                                                      >  SRR4302545.10640280/1‑94 (MQ=60)

                         ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC                                                                      <  SRR4302545.9927584/94‑1 (MQ=60)

                         ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC                                                                      >  SRR4302545.308577/1‑94 (MQ=60)

                          TTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACC                                                                     >  SRR4302545.8266586/1‑94 (MQ=60)

                          TTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACC                                                                     >  SRR4302545.10565130/1‑94 (MQ=60)

                            AACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCAT                                                                   >  SRR4302545.8484958/1‑94 (MQ=60)

                              CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 >  SRR4302545.737905/1‑94 (MQ=60)

                              CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 >  SRR4302545.7107778/1‑94 (MQ=60)

                              CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 <  SRR4302545.8110447/94‑1 (MQ=60)

                              CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 <  SRR4302545.10567518/94‑1 (MQ=60)

                              CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 >  SRR4302545.8323999/1‑94 (MQ=60)

                              ACCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA                                                                 <  SRR4302545.8167479/94‑1 (MQ=60)

                               CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG                                                                <  SRR4302545.8780057/94‑1 (MQ=60)

                                acgctcttccgatctctgatctGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC                                                               >  SRR4302545.3465541/23‑94 (MQ=60)

                                CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC                                                               >  SRR4302545.5404055/1‑94 (MQ=60)

                                CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC                                                               <  SRR4302545.5836522/94‑1 (MQ=60)

                                CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC                                                               <  SRR4302545.6448828/94‑1 (MQ=60)

                                CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC                                                               <  SRR4302545.3551890/94‑1 (MQ=60)

                                 TTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCT                                                              >  SRR4302545.8879031/1‑94 (MQ=60)

                                  TCAGGACCACGCCATTCCCCGCTGCACTGGTAGCTAATCTGTTGCCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATTACCATCAGCTT                                                             >  SRR4302545.1933415/1‑94 (MQ=60)

                                  TCAGGACCACGCCATTCCCCGCTGAGCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTT                                                             <  SRR4302545.10029636/94‑1 (MQ=60)

                                  TCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTT                                                             <  SRR4302545.10029637/94‑1 (MQ=60)

                                  TCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTT                                                             >  SRR4302545.8910735/1‑94 (MQ=60)

                                  TCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTT                                                             >  SRR4302545.1933416/1‑94 (MQ=60)

                                   CAGGACCCCGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTT                                                            <  SRR4302545.2451970/94‑1 (MQ=60)

                                   CAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTT                                                            <  SRR4302545.2206962/94‑1 (MQ=60)

                                    AGGACCACGCCATTCCCCGCTGACCTGGTAGCTAATATGTTGTTTGCAGTCGGCGTTGAATTCGACGGCACGATTATCATCACCATCAGCTTTT                                                           <  SRR4302545.10735471/94‑1 (MQ=60)

                                    AGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTT                                                           <  SRR4302545.8678941/94‑1 (MQ=60)

                                    AGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTT                                                           <  SRR4302545.3060449/94‑1 (MQ=60)

                                    AGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTT                                                           >  SRR4302545.37535/1‑94 (MQ=60)

                                     GGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTT                                                          <  SRR4302545.10221689/94‑1 (MQ=60)

                                     GGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTT                                                          <  SRR4302545.5158592/94‑1 (MQ=60)

                                     GGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTT                                                          <  SRR4302545.1074577/94‑1 (MQ=60)

                                     GGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATAAGCTTATT                                                          <  SRR4302545.9623341/94‑1 (MQ=60)

                                      GACCCCGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG                                                         <  SRR4302545.8313847/94‑1 (MQ=60)

                                      GACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG                                                         <  SRR4302545.6961866/94‑1 (MQ=60)

                                      GACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG                                                         <  SRR4302545.7520820/94‑1 (MQ=60)

                                      GACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG                                                         >  SRR4302545.275159/1‑94 (MQ=60)

                                      GACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG                                                         <  SRR4302545.6961867/94‑1 (MQ=60)

                                       ACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGG                                                        <  SRR4302545.2888284/94‑1 (MQ=60)

                                        CCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGCCACGATTATCATCACCATCAGCTTTTTGGC                                                       <  SRR4302545.3596452/94‑1 (MQ=60)

                                         CACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCA                                                      >  SRR4302545.7123658/1‑94 (MQ=60)

                                         CACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCA                                                      <  SRR4302545.4325599/94‑1 (MQ=60)

                                         CACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCA                                                      <  SRR4302545.2922833/94‑1 (MQ=60)

                                         CACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCA                                                      >  SRR4302545.3638070/1‑94 (MQ=60)

                                          ACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAA                                                     >  SRR4302545.4239598/1‑94 (MQ=60)

                                           CGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAT                                                    <  SRR4302545.4990265/94‑1 (MQ=60)

                                           CGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAT                                                    <  SRR4302545.7185089/94‑1 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   <  SRR4302545.7269213/94‑1 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   <  SRR4302545.8480526/94‑1 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   >  SRR4302545.645949/1‑94 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   <  SRR4302545.9243985/94‑1 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   >  SRR4302545.9038806/1‑94 (MQ=60)

                                            GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT                                                   >  SRR4302545.6959934/1‑94 (MQ=60)

                                             CCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTG                                                  <  SRR4302545.10803479/94‑1 (MQ=60)

                                             CCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTG                                                  >  SRR4302545.9759563/1‑94 (MQ=60)

                                              CATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGC                                                 >  SRR4302545.5953627/1‑94 (MQ=60)

                                              CATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGC                                                 >  SRR4302545.5572405/1‑94 (MQ=60)

                                              CATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGC                                                 >  SRR4302545.1310859/1‑94 (MQ=60)

                                               ATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCC                                                <  SRR4302545.4821767/94‑1 (MQ=60)

                                               ATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCC                                                >  SRR4302545.5020148/1‑94 (MQ=60)

                                                  CCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAA                                             >  SRR4302545.9532375/1‑94 (MQ=60)

                                                  CCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAA                                             <  SRR4302545.993060/94‑1 (MQ=60)

                                                  CCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAA                                             >  SRR4302545.264036/1‑94 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            <  SRR4302545.5232175/94‑1 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            >  SRR4302545.9239570/1‑94 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            <  SRR4302545.5603382/94‑1 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            >  SRR4302545.4916467/1‑94 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            <  SRR4302545.2985840/94‑1 (MQ=60)

                                                   CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT                                            >  SRR4302545.4138410/1‑94 (MQ=60)

                                                    CCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATG                                           <  SRR4302545.9350999/94‑1 (MQ=60)

                                                      GCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCATATGCT                                         >  SRR4302545.5519486/1‑94 (MQ=60)

                                                      GCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCT                                         >  SRR4302545.5519488/1‑94 (MQ=60)

                                                      GCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCT                                         >  SRR4302545.1134318/1‑94 (MQ=60)

                                                      GCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCT                                         >  SRR4302545.7777198/1‑94 (MQ=60)

                                                        TGAACTGGTAGCTAATATGTTGACTGCCTTCGTCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTT                                       <  SRR4302545.10454320/94‑1 (MQ=60)

                                                        TGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTT                                       >  SRR4302545.7335463/1‑94 (MQ=60)

                                                        TGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTT                                       >  SRR4302545.298023/1‑94 (MQ=60)

                                                         GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG                                      <  SRR4302545.7066846/94‑1 (MQ=60)

                                                         GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG                                      >  SRR4302545.5851081/1‑94 (MQ=60)

                                                         GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG                                      <  SRR4302545.1904821/94‑1 (MQ=60)

                                                         GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG                                      <  SRR4302545.9643153/94‑1 (MQ=60)

                                                         GAACTGGCAGCTAATATGTTGACTACCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG                                      <  SRR4302545.5226646/94‑1 (MQ=60)

                                                          AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC                                     >  SRR4302545.5853275/1‑94 (MQ=60)

                                                          AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGAACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC                                     >  SRR4302545.5853274/1‑94 (MQ=60)

                                                           ACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCT                                    <  SRR4302545.5874216/94‑1 (MQ=60)

                                                           ACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCT                                    <  SRR4302545.8931794/94‑1 (MQ=60)

                                                            CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG                                   <  SRR4302545.2472613/94‑1 (MQ=60)

                                                            CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG                                   >  SRR4302545.4511565/1‑94 (MQ=60)

                                                            CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG                                   <  SRR4302545.7746610/94‑1 (MQ=60)

                                                            CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG                                   >  SRR4302545.9089650/1‑94 (MQ=60)

                                                            CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG                                   <  SRR4302545.8795286/94‑1 (MQ=60)

                                                              GGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTA                                 <  SRR4302545.6897841/94‑1 (MQ=60)

                                                               GTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAA                                >  SRR4302545.2460950/1‑94 (MQ=60)

                                                               GTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAA                                <  SRR4302545.321015/94‑1 (MQ=60)

                                                               GTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAA                                <  SRR4302545.5382410/94‑1 (MQ=60)

                                                                TAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAA                               >  SRR4302545.2715549/1‑94 (MQ=60)

                                                                 AGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCCCCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAG                              <  SRR4302545.1241267/94‑1 (MQ=60)

                                                                 AGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAG                              >  SRR4302545.4748077/1‑94 (MQ=60)

                                                                 AGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAG                              <  SRR4302545.1241266/94‑1 (MQ=60)

                                                                  GCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGG                             <  SRR4302545.10259758/94‑1 (MQ=60)

                                                                   CTAATATGTTGTCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGT                            <  SRR4302545.2178762/94‑1 (MQ=60)

                                                                   CTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGT                            >  SRR4302545.6837768/1‑94 (MQ=60)

                                                                   CTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGCAAAGGT                            <  SRR4302545.10833986/94‑1 (MQ=60)

                                                                    TAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTC                           <  SRR4302545.2467718/94‑1 (MQ=60)

                                                                    TAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTC                           >  SRR4302545.10617609/1‑94 (MQ=60)

                                                                    TAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTC                           >  SRR4302545.7774642/1‑94 (MQ=60)

                                                                      ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC                         >  SRR4302545.2296154/1‑94 (MQ=60)

                                                                      ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC                         >  SRR4302545.2738685/1‑94 (MQ=60)

                                                                      ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC                         <  SRR4302545.8663658/94‑1 (MQ=60)

                                                                      ATATGTTGACCGCCTCCGGCGTTGCTTTCGACGGCACGATTATCATCCCCATCCGCTTTTTCGCGATTGCCAAATGCTTGGCTGTAAAGGTCGC                         <  SRR4302545.7402419/94‑1 (MQ=42)

                                                                        ATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTA                       <  SRR4302545.2202494/94‑1 (MQ=60)

                                                                        ATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTA                       >  SRR4302545.8939235/1‑94 (MQ=60)

                                                                        ATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTA                       <  SRR4302545.3998837/94‑1 (MQ=60)

                                                                          GTTGTCTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAA                     <  SRR4302545.2392022/94‑1 (MQ=60)

                                                                          GTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAA                     <  SRR4302545.304812/94‑1 (MQ=60)

                                                                          GTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAA                     >  SRR4302545.3134547/1‑94 (MQ=60)

                                                                          GTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAA                     >  SRR4302545.3829735/1‑94 (MQ=60)

                                                                           TTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAC                    <  SRR4302545.17366/94‑1 (MQ=60)

                                                                           TTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAC                    <  SRR4302545.135764/94‑1 (MQ=60)

                                                                            TGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACG                   <  SRR4302545.4980838/94‑1 (MQ=60)

                                                                             GACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAGAGGTCGCTAAACGG                  >  SRR4302545.5559007/1‑94 (MQ=60)

                                                                             GACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGG                  <  SRR4302545.178599/94‑1 (MQ=60)

                                                                             GACTGCCGTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGG                  >  SRR4302545.7772986/1‑94 (MQ=60)

                                                                               CTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTG                <  SRR4302545.10124786/94‑1 (MQ=60)

                                                                               CTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTG                >  SRR4302545.8928600/1‑94 (MQ=60)

                                                                                TGCCTTCGGCTTTGCATTCGACGGCACGATTATCATGACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGT               <  SRR4302545.4275580/94‑1 (MQ=60)

                                                                                TGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGT               <  SRR4302545.6350220/94‑1 (MQ=60)

                                                                                 GCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTA              >  SRR4302545.630518/1‑94 (MQ=60)

                                                                                 GCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTA              <  SRR4302545.1291244/94‑1 (MQ=60)

                                                                                 GCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTA              >  SRR4302545.9458833/1‑94 (MQ=60)

                                                                                  CCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAC             >  SRR4302545.53268/1‑94 (MQ=60)

                                                                                   CTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACC            <  SRR4302545.6708854/94‑1 (MQ=60)

                                                                                   CTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACC            <  SRR4302545.7025161/94‑1 (MQ=60)

                                                                                    TTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCG           <  SRR4302545.4795348/94‑1 (MQ=60)

                                                                                      CGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAT         >  SRR4302545.8177094/1‑94 (MQ=60)

                                                                                      CGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAT         >  SRR4302545.5018614/1‑94 (MQ=60)

                                                                                      CGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAT         <  SRR4302545.6936411/94‑1 (MQ=60)

                                                                                      CGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGGGAACCGAT         >  SRR4302545.2483893/1‑94 (MQ=60)

                                                                                       GGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATT        <  SRR4302545.6300011/94‑1 (MQ=60)

                                                                                       GGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATT        >  SRR4302545.9758203/1‑94 (MQ=60)

                                                                                       GGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATT        <  SRR4302545.171542/94‑1 (MQ=60)

                                                                                       GGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATT        >  SRR4302545.4152018/1‑94 (MQ=60)

                                                                                       GGCTTTGCAGTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTTCCGATT        <  SRR4302545.714101/94‑1 (MQ=60)

                                                                                        GCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTT       <  SRR4302545.3399619/94‑1 (MQ=60)

                                                                                        GCTTTGCATGCTACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGGAAAGGTCGCGAAACGGTGTACCGCTTT       <  SRR4302545.10824455/94‑1 (MQ=60)

                                                                                        GCTTTGCATGCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGGCGCTAAACGGGGTACCGATTT       <  SRR4302545.10824454/94‑1 (MQ=60)

                                                                                         CTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGGCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTT      >  SRR4302545.5142405/1‑94 (MQ=60)

                                                                                         CTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTT      >  SRR4302545.8812547/1‑94 (MQ=60)

                                                                                         CTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGCCGCTAAACGGTGTCCCGATTTT      >  SRR4302545.2531169/1‑94 (MQ=60)

                                                                                           TTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTCGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAA    <  SRR4302545.6875402/94‑1 (MQ=60)

                                                                                            TGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAAC   >  SRR4302545.10528033/1‑94 (MQ=60)

                                                                                            TGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAAC   >  SRR4302545.2807629/1‑94 (MQ=60)

                                                                                             GCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  SRR4302545.6656505/1‑94 (MQ=60)

                                                                                             GCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  SRR4302545.6656508/1‑94 (MQ=60)

                                                                                             GCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  <  SRR4302545.3126425/94‑1 (MQ=60)

                                                                                             GCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  SRR4302545.5560552/1‑94 (MQ=60)

                                                                                             GCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  SRR4302545.3851013/1‑94 (MQ=60)

GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA  >  NC_000913/2548694‑2548880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`