Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,548,787 |
A→G |
C150C (TGT→TGC) |
b2432 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,548,787 | 0 | A | G | 99.6%
| 844.4
/ NA
| 238 | C150C (TGT→TGC) | b2432 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (106/131); minor base T (0/1); total (106/132) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 241 total aligned reads displayed.
TTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTT > NC_000913/2548697‑2548876
|
tCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCAtt < 2:4688924/93‑1 (MQ=255)
tCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCAtt < 1:5687902/93‑1 (MQ=255)
gggTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGa > 2:4865718/1‑93 (MQ=255)
gggTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGa > 1:1274336/1‑93 (MQ=255)
gggTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGa < 1:3087456/93‑1 (MQ=255)
ggTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGAc < 2:2564192/93‑1 (MQ=255)
gTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACg < 2:4337894/93‑1 (MQ=255)
tATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACgg < 2:2899917/93‑1 (MQ=255)
tggTCGGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCGAATATGTTGACTGCCTTCCGCTTTGCATTCGACggac > 2:6159784/3‑91 (MQ=255)
tCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCa < 2:5010535/93‑1 (MQ=255)
tCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCa < 1:1525756/93‑1 (MQ=255)
tCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCa > 1:628389/1‑93 (MQ=255)
gTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACg > 1:2022222/1‑93 (MQ=255)
gTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACg > 1:4131810/1‑93 (MQ=255)
tCCGAAGGCATTACCCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGa < 2:5747070/93‑1 (MQ=255)
tCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGa > 2:5682360/1‑93 (MQ=255)
tCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGa < 2:5929694/93‑1 (MQ=255)
tCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGa < 1:786621/93‑1 (MQ=255)
cGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGAtt > 2:6383485/1‑93 (MQ=255)
aaGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTat > 2:5819168/1‑93 (MQ=255)
aGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatc > 2:5591168/1‑93 (MQ=255)
gCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatcat > 1:1743523/1‑93 (MQ=255)
cATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatcatc < 2:187400/93‑1 (MQ=255)
cATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTatcatc > 1:3104845/1‑93 (MQ=255)
aTTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTAtcatca > 1:4683694/1‑93 (MQ=255)
tAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAcc < 1:1021518/93‑1 (MQ=255)
cccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATc < 2:1296088/93‑1 (MQ=255)
ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa < 1:4462477/93‑1 (MQ=255)
ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa < 1:3814968/93‑1 (MQ=255)
ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa < 2:2404475/93‑1 (MQ=255)
ccTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCa < 1:3414586/93‑1 (MQ=255)
cTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAg > 1:6451550/1‑93 (MQ=255)
ttCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGc > 1:2567206/1‑93 (MQ=255)
tCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCt < 1:2329291/93‑1 (MQ=255)
gACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCttttt < 1:3602456/93‑1 (MQ=255)
gACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGATGACTGCCTCCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCttttt < 2:310328/93‑1 (MQ=255)
aCCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTg < 2:4400666/93‑1 (MQ=255)
aCCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTg < 1:524168/93‑1 (MQ=255)
ccACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTgg < 1:889270/93‑1 (MQ=255)
ccACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTgg > 2:2447849/1‑93 (MQ=255)
ccACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTgg < 1:612207/93‑1 (MQ=255)
cACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGc > 2:1513898/1‑93 (MQ=255)
cACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGc > 2:5856810/1‑93 (MQ=255)
gCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAt < 2:3829593/93‑1 (MQ=255)
ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAtt > 2:2978068/1‑93 (MQ=255)
ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAtt > 1:4250408/1‑93 (MQ=255)
ccATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAtt > 2:5030404/1‑93 (MQ=255)
aTTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGc > 1:932844/1‑93 (MQ=255)
aTTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGc > 1:1403151/1‑93 (MQ=255)
ttCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGcc < 1:5067763/93‑1 (MQ=255)
ttCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGcc < 1:3961135/93‑1 (MQ=255)
cccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCaaa < 1:1179670/93‑1 (MQ=255)
cccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCaaa < 1:2432601/93‑1 (MQ=255)
ccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAt > 1:3348759/1‑93 (MQ=255)
ccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAt < 2:5163620/93‑1 (MQ=255)
ccGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAt < 2:4590255/93‑1 (MQ=255)
cGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATg < 1:4172917/93‑1 (MQ=255)
gCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGc > 1:1897907/1‑93 (MQ=255)
cTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCt < 2:5480210/93‑1 (MQ=255)
cTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCt < 1:6145454/93‑1 (MQ=255)
tGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCtt < 2:6417981/93‑1 (MQ=255)
gAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCttt > 2:5950293/1‑93 (MQ=255)
gAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCttt < 1:4618814/93‑1 (MQ=255)
gAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCttt < 1:5445465/93‑1 (MQ=255)
aaCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTg < 1:186906/93‑1 (MQ=255)
aaCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTg < 2:2737966/93‑1 (MQ=255)
aaCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTg < 1:5868315/93‑1 (MQ=255)
aCTGGTAGCTAATATGTTGTCTGCCTTCGGCTTTTCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGc < 2:1573847/93‑1 (MQ=255)
aCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGc > 1:5784090/1‑93 (MQ=255)
aCTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGc < 2:2074354/93‑1 (MQ=255)
cTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCt < 2:3192420/93‑1 (MQ=255)
cTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATCCTTTGCt < 2:6364768/93‑1 (MQ=255)
tGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTg > 2:4127124/1‑93 (MQ=255)
ggTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCACCTTTTTGGCAATTGCCAAATGCTTTGCTGt > 1:589118/1‑93 (MQ=255)
tAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTaa < 2:2634049/93‑1 (MQ=255)
tAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTaa > 1:2740859/1‑93 (MQ=255)
aGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTaaa < 2:408811/93‑1 (MQ=255)
gCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAg < 1:2207571/93‑1 (MQ=255)
cTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAgg < 2:125548/93‑1 (MQ=255)
cTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAgg > 1:4428100/1‑93 (MQ=255)
cTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAgg < 2:5730702/93‑1 (MQ=255)
tAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGt < 2:6138971/93‑1 (MQ=255)
atatGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCg < 1:3651612/93‑1 (MQ=255)
atatGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCg > 2:6456570/1‑93 (MQ=255)
tatGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGc > 1:4528922/1‑93 (MQ=255)
gACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACg < 2:2267093/93‑1 (MQ=255)
gACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACg < 1:2096440/93‑1 (MQ=255)
tGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgtg > 2:1748122/1‑93 (MQ=255)
tGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgtg < 2:67894/93‑1 (MQ=255)
gCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGgtgt < 1:5366731/93‑1 (MQ=255)
ttCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAcc < 2:838997/93‑1 (MQ=255)
tCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCg > 2:3648855/1‑93 (MQ=255)
cGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGa < 2:1134582/93‑1 (MQ=255)
gCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtt > 2:3506212/1‑93 (MQ=255)
gCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtt > 2:103925/1‑93 (MQ=255)
gCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtt > 2:424194/1‑93 (MQ=255)
cTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAttt > 2:915927/1‑93 (MQ=255)
tttGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtttt < 2:1806298/93‑1 (MQ=255)
tttGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtttt > 1:2829737/1‑93 (MQ=255)
tttGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGAtgtt > 2:140537/1‑93 (MQ=255)
|
TTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTT > NC_000913/2548697‑2548876
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA > NC_000913/2548694‑2548880
|
GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTG > SRR4302537.5585538/1‑94 (MQ=60)
TTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGC < SRR4302537.3698618/94‑1 (MQ=60)
TTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGC < SRR4302537.2216469/94‑1 (MQ=60)
TTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCA > SRR4302537.5808800/1‑94 (MQ=60)
TCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTC < SRR4302537.5726806/94‑1 (MQ=60)
AGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGA > SRR4302537.1283198/1‑94 (MQ=60)
AGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGA > SRR4302537.1716965/1‑94 (MQ=60)
GGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGAC > SRR4302537.3042712/1‑94 (MQ=60)
GGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGAC < SRR4302537.3108994/94‑1 (MQ=60)
ATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCA > SRR4302537.632668/1‑94 (MQ=60)
ATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCA > SRR4302537.6181183/1‑94 (MQ=60)
TCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAC < SRR4302537.906455/94‑1 (MQ=60)
TCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCAC < SRR4302537.1536410/94‑1 (MQ=60)
CGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACG > SRR4302537.4160641/1‑94 (MQ=60)
CGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACG > SRR4302537.2036330/1‑94 (MQ=60)
CGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACG > SRR4302537.2036331/1‑94 (MQ=60)
CGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACG < SRR4302537.661090/94‑1 (MQ=60)
TCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGAT < SRR4302537.792022/94‑1 (MQ=60)
CGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTA > SRR4302537.4981917/1‑94 (MQ=60)
GAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTAT < SRR4302537.1875705/94‑1 (MQ=60)
GAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTAT < SRR4302537.6281047/94‑1 (MQ=60)
GAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTAT > SRR4302537.5192381/1‑94 (MQ=60)
AGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCA < SRR4302537.4871053/94‑1 (MQ=60)
AGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCA < SRR4302537.6403298/94‑1 (MQ=60)
GGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCAT > SRR4302537.1755676/1‑94 (MQ=60)
GGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCAT < SRR4302537.2815145/94‑1 (MQ=60)
GGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCAT > SRR4302537.2726611/1‑94 (MQ=60)
GCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATC > SRR4302537.3126533/1‑94 (MQ=60)
CATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCA > SRR4302537.4716091/1‑94 (MQ=60)
CATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCA > SRR4302537.1937941/1‑94 (MQ=60)
CATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCA > SRR4302537.712094/1‑94 (MQ=60)
ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCAC > SRR4302537.1071795/1‑94 (MQ=60)
ATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCCGCTTTGCATTCGACGGCACGATTATCATCAC > SRR4302537.5934564/1‑94 (MQ=60)
TAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCA < SRR4302537.1028556/94‑1 (MQ=60)
AACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCAT > SRR4302537.5447734/1‑94 (MQ=60)
CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA > SRR4302537.2344930/1‑94 (MQ=60)
CCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCA < SRR4302537.3431866/94‑1 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG > SRR4302537.6495294/1‑94 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG < SRR4302537.3841719/94‑1 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG > SRR4302537.438658/1‑94 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG < SRR4302537.4493335/94‑1 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG < SRR4302537.3438764/94‑1 (MQ=60)
CCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAG < SRR4302537.2177222/94‑1 (MQ=60)
CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC > SRR4302537.2585191/1‑94 (MQ=60)
CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC > SRR4302537.3120331/1‑94 (MQ=60)
CTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGC > SRR4302537.4645506/1‑94 (MQ=60)
TCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTT < SRR4302537.2345719/94‑1 (MQ=60)
AGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTT < SRR4302537.5781755/94‑1 (MQ=60)
AGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTT < SRR4302537.3792410/94‑1 (MQ=60)
GGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTT < SRR4302537.1258401/94‑1 (MQ=60)
GACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTG < SRR4302537.3627846/94‑1 (MQ=60)
ACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGG < SRR4302537.527765/94‑1 (MQ=60)
CCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGC < SRR4302537.895386/94‑1 (MQ=60)
CCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGC > SRR4302537.1891793/1‑94 (MQ=60)
CCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGC < SRR4302537.616386/94‑1 (MQ=60)
CCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCATTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGC > SRR4302537.4586918/1‑94 (MQ=60)
ACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAA < SRR4302537.4472362/94‑1 (MQ=60)
CGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAAT > SRR4302537.4526989/1‑94 (MQ=60)
GCCATTCCCCGCTGAACTGGTNNCTNATNTGTTGANTGCCTTCNGNTTTGCNTTCGACNGCNCNATNATnnnnnncannancnnnnnnnnannt > SRR4302537.2738897/1‑69 (MQ=45)
GCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATT > SRR4302537.4279948/1‑94 (MQ=60)
CATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGC > SRR4302537.1412922/1‑94 (MQ=60)
CATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGC > SRR4302537.939274/1‑94 (MQ=60)
TTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCA < SRR4302537.3988845/94‑1 (MQ=60)
TTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCA < SRR4302537.3528530/94‑1 (MQ=60)
TTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCA < SRR4302537.5102647/94‑1 (MQ=60)
CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT > SRR4302537.3372462/1‑94 (MQ=60)
CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT < SRR4302537.794252/94‑1 (MQ=60)
CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT < SRR4302537.1187880/94‑1 (MQ=60)
CCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAAT < SRR4302537.2449738/94‑1 (MQ=60)
CGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGC < SRR4302537.3693148/94‑1 (MQ=60)
CGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGC < SRR4302537.3658880/94‑1 (MQ=60)
CGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGC > SRR4302537.1911092/1‑94 (MQ=60)
CGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGC < SRR4302537.4202060/94‑1 (MQ=60)
GCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCT > SRR4302537.5437531/1‑94 (MQ=60)
CTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTT < SRR4302537.6187722/94‑1 (MQ=60)
CTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTT > SRR4302537.2827255/1‑94 (MQ=60)
GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG < SRR4302537.5482613/94‑1 (MQ=60)
GAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTG < SRR4302537.4650801/94‑1 (MQ=60)
AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC < SRR4302537.188235/94‑1 (MQ=60)
AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC > SRR4302537.5823744/1‑94 (MQ=60)
AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC < SRR4302537.5908574/94‑1 (MQ=60)
AACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGC > SRR4302537.2489406/1‑94 (MQ=60)
ACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCT < SRR4302537.3454269/94‑1 (MQ=60)
ACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCT < SRR4302537.593034/94‑1 (MQ=60)
CTGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTG < SRR4302537.2488015/94‑1 (MQ=60)
TGGTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCACCTTTTTGGCAATTGCCAAATGCTTTGCTGT > SRR4302537.593140/1‑94 (MQ=60)
GTAGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAA > SRR4302537.2759981/1‑94 (MQ=60)
AGCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAG > SRR4302537.1368400/1‑94 (MQ=60)
GCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGG > SRR4302537.4458682/1‑94 (MQ=60)
GCTAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGG < SRR4302537.2223136/94‑1 (MQ=60)
TAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTC < SRR4302537.5660734/94‑1 (MQ=60)
TAATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTC < SRR4302537.4270054/94‑1 (MQ=60)
AATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCG > SRR4302537.3847537/1‑94 (MQ=60)
ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC > SRR4302537.4560281/1‑94 (MQ=60)
ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC < SRR4302537.3677318/94‑1 (MQ=60)
ATATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGC < SRR4302537.4343011/94‑1 (MQ=60)
TATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCT > SRR4302537.4165856/1‑94 (MQ=60)
ATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTA > SRR4302537.1443786/1‑94 (MQ=60)
ATGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTA < SRR4302537.586512/94‑1 (MQ=60)
TGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAA < SRR4302537.6264472/94‑1 (MQ=60)
TGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAA < SRR4302537.2353086/94‑1 (MQ=60)
TGTTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAA < SRR4302537.3237372/94‑1 (MQ=60)
TTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAC < SRR4302537.2186733/94‑1 (MQ=60)
TTGACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAAC < SRR4302537.4142239/94‑1 (MQ=60)
GACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGG < SRR4302537.2111225/94‑1 (MQ=60)
GACTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGG < SRR4302537.3317978/94‑1 (MQ=60)
CTGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTG < SRR4302537.6084521/94‑1 (MQ=60)
TGCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGT < SRR4302537.1389989/94‑1 (MQ=60)
GCCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTA < SRR4302537.5403452/94‑1 (MQ=60)
CCTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTAC > SRR4302537.1596723/1‑94 (MQ=60)
CTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACC < SRR4302537.4703618/94‑1 (MQ=60)
CTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACC > SRR4302537.533520/1‑94 (MQ=60)
CTTCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACC > SRR4302537.4174342/1‑94 (MQ=60)
TCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGA > SRR4302537.2062173/1‑94 (MQ=60)
TCGGCTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGA < SRR4302537.990121/94‑1 (MQ=60)
CTTTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTT > SRR4302537.2849507/1‑94 (MQ=60)
TTGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAA < SRR4302537.4824661/94‑1 (MQ=60)
TGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAAC < SRR4302537.6448542/94‑1 (MQ=60)
TGCATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAAC < SRR4302537.4896912/94‑1 (MQ=60)
TCATTCGACGGCACGATTATCATCACCAGCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA < SRR4302537.859065/94‑1 (MQ=60)
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GTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTTGACTGCCTTCGGCTTTACATTCGACGGCACGATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACA > NC_000913/2548694‑2548880
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
