Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,551,423 |
T→C |
V60A (GTC→GCC) |
hemF → |
coproporphyrinogen III oxidase |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,551,423 | 0 | T | C | 98.0%
| 845.4
/ 1.8
| 254 | V60A (GTC→GCC) | hemF | coproporphyrinogen III oxidase |
| Reads supporting (aligned to +/- strand): ref base T (2/3); new base C (110/139); total (112/142) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 |
Only 100 of 267 total aligned reads displayed.
GAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGG > NC_000913/2551332‑2551513
|
gAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCa < 1:1334450/94‑1 (MQ=255)
gAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCa < 1:9232132/94‑1 (MQ=255)
aaTTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCaa < 2:3143183/94‑1 (MQ=255)
aaTTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGGAATGGTGGTGTTTTCGAACAAGCAGGCGCCaa > 1:3960212/1‑94 (MQ=255)
tGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACttt > 2:4696064/1‑94 (MQ=255)
gTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACtttt > 1:5099993/1‑94 (MQ=255)
tCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTc < 1:3744694/94‑1 (MQ=255)
tCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTc < 1:4617188/94‑1 (MQ=255)
cGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCCACTTTTCg > 1:2440395/1‑94 (MQ=255)
aGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAt > 2:4454986/1‑94 (MQ=255)
aGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGGGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAt > 2:2809556/1‑94 (MQ=255)
aTAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGt < 1:10274561/94‑1 (MQ=255)
aTAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGt < 2:4232904/94‑1 (MQ=255)
aGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTca < 1:1834615/94‑2 (MQ=255)
gTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCa < 2:5750492/94‑1 (MQ=255)
tGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACg < 2:1238815/94‑1 (MQ=255)
ggCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACgg < 2:663127/94‑1 (MQ=255)
ggCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACgg < 2:9315681/94‑1 (MQ=255)
ggCAGCGCGAAGCTGGCGGCGGCGGGCGGAGTCGGGTGTTGCGGAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACgg > 1:9446449/1‑94 (MQ=255)
gCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGt < 1:10034023/94‑1 (MQ=255)
gCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGt < 1:8911982/94‑1 (MQ=255)
gCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGt > 2:3000359/1‑94 (MQ=255)
taGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTg > 1:3087959/2‑94 (MQ=255)
cAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTg < 2:5831516/94‑1 (MQ=255)
aGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGa > 2:1703450/1‑94 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCCTGTCCACGGTGAgg > 1:3114960/1‑94 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg > 2:3463189/1‑94 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg < 2:623715/94‑1 (MQ=255)
cgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCg < 1:501440/94‑1 (MQ=255)
cgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCg < 2:8493367/94‑1 (MQ=255)
gAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGa > 1:10157091/1‑94 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATg < 1:986384/94‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATg < 1:2343883/94‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATg < 1:6598812/94‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATg < 1:6894123/94‑1 (MQ=255)
tGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCt < 1:8856131/94‑1 (MQ=255)
tGGCGGCGGCGGGCATAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCt > 2:4017629/1‑94 (MQ=255)
cggcggcggcGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCt < 2:6969440/93‑1 (MQ=255)
ggcggcggcGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTg < 2:3725920/94‑1 (MQ=255)
gcggcggcgGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGc < 1:7171171/94‑1 (MQ=255)
cggcggcggGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCt < 1:580195/94‑1 (MQ=255)
cggcggcggGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCt > 2:2248159/1‑94 (MQ=255)
ggcggcggGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGGGAGGCGATGCCTGCtt > 1:4732088/1‑94 (MQ=255)
gcggcggGCGTAGTCGGGGGTTGCGTAATGGGGGGGGTTTCGAACAGGCAGGCGCCCACTTTTCGCATGTCCACGGGGAGGGGATGCCTGCTTc > 2:7961061/1‑94 (MQ=255)
cggcggGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTcc < 1:5972691/94‑1 (MQ=255)
gcgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGc < 2:1564685/94‑1 (MQ=255)
gcgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGc > 2:520255/1‑94 (MQ=255)
cgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGcc > 2:2216160/1‑94 (MQ=255)
cgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGcc > 2:2979259/1‑94 (MQ=255)
ggTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCg < 1:8113498/93‑1 (MQ=255)
gTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGc > 1:515617/1‑94 (MQ=255)
tAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCt < 2:10433916/94‑1 (MQ=255)
gTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCa < 1:2196734/94‑1 (MQ=255)
tCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCAt < 2:6277832/94‑1 (MQ=255)
cGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATc > 2:1380381/1‑94 (MQ=255)
cGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATc < 2:6865114/94‑1 (MQ=255)
gggTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCg > 1:8386964/1‑94 (MQ=255)
gggTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCg > 2:2702886/1‑94 (MQ=255)
ggTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGc > 1:9698201/1‑94 (MQ=255)
ggTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGc < 1:7542855/94‑1 (MQ=255)
gtgtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGcc > 1:2612697/1‑94 (MQ=255)
gtgtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGcc > 1:3834578/1‑94 (MQ=255)
tgtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGccc > 2:9826202/1‑94 (MQ=255)
tgtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGccc < 2:7476244/94‑1 (MQ=255)
tGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGa < 1:8258925/94‑1 (MQ=255)
tGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGa > 1:3098492/1‑94 (MQ=255)
ggTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAc < 2:8994569/93‑1 (MQ=255)
cGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTACGCCACCGCTCATCGCCCGGAAc > 2:9168889/1‑94 (MQ=255)
gTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACt > 1:1369401/1‑94 (MQ=255)
actggtggTGTTTTCGAACAGGCAGGCGCCAACTTTTTGCATGTGCACGGTGACGCGGTGGGTGCGTCCGCCGCCCCTCATCGCCCGGAACttt > 2:7094464/3‑93 (MQ=255)
ggtggtGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCg < 1:7671160/94‑1 (MQ=255)
gtggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCgg > 1:3711876/1‑94 (MQ=255)
gtggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCgg < 1:9332949/94‑1 (MQ=255)
tggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCggg > 1:2887212/1‑94 (MQ=255)
ggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGCACTTGCCGGgc < 1:6864105/94‑1 (MQ=255)
ggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGgc > 2:4094561/1‑94 (MQ=255)
tgtTTTCGAACAGGCAGGCGTCAACTTTTCGCACGTCAAAGGCGAGGCGATGCCTGCTTCCGCAACCACTCATCGCCCGGCACTGGCCgcgcgc > 2:9456856/1‑94 (MQ=255)
tgtTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGgcgc > 1:3016143/1‑94 (MQ=255)
tgtTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGgcgc > 2:10184723/1‑94 (MQ=255)
gtTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCa < 1:1758955/94‑1 (MQ=255)
ttttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAg < 2:7366584/94‑1 (MQ=255)
tttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGt > 1:151831/1‑94 (MQ=255)
ttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGtt < 1:9093771/94‑1 (MQ=255)
tCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGttt > 2:827289/1‑94 (MQ=255)
tCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGttt < 1:4199649/94‑1 (MQ=255)
caggcaggCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAgg > 2:2344971/1‑94 (MQ=255)
aggcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGc > 1:6127904/1‑94 (MQ=255)
aggcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGc < 2:7849341/94‑1 (MQ=255)
aggcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGc > 1:445086/1‑94 (MQ=255)
aggcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGc > 1:7907175/1‑94 (MQ=255)
caggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGAt > 2:8610211/1‑94 (MQ=255)
caggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGAt < 2:5577162/94‑1 (MQ=255)
caggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCCGAACTTGCCGGGCGCGGTTTCGAGGCGag > 1:2011235/1‑93 (MQ=255)
aggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATg < 1:4882894/94‑1 (MQ=255)
aggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATg < 2:1118214/94‑1 (MQ=255)
aggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATg > 2:2509237/1‑94 (MQ=255)
ggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATgg < 2:7299104/94‑1 (MQ=255)
gcgcCACCTGTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATggg < 1:5355587/94‑1 (MQ=255)
gcgcCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATggg < 2:5914871/94‑1 (MQ=255)
gcgcCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCACGTAACTTGCCGGGCGCCGTTTCGGGGCGGTggg > 1:4011530/1‑94 (MQ=255)
|
GAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGG > NC_000913/2551332‑2551513
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTT > NC_000913/2551330‑2551517
|
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTGATGGTGGTGTTTTCGAACAGGGAGGCGC > SRR4302545.10283499/1‑94 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCC > SRR4302545.6646604/1‑94 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCC > SRR4302545.5509734/1‑94 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGCGTTTTCGAACAGGAAGGCGCC > SRR4302545.563770/1‑94 (MQ=60)
GAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCA < SRR4302545.2458232/94‑1 (MQ=60)
GAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCA < SRR4302545.1364170/94‑1 (MQ=60)
GAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCA < SRR4302545.9502808/94‑1 (MQ=60)
AATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGGAATGGTGGTGTTTTCGAACAAGCAGGCGCCAA > SRR4302545.4059196/1‑94 (MQ=60)
ATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAAC > SRR4302545.92203/1‑94 (MQ=60)
TTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACT < SRR4302545.7039031/94‑1 (MQ=60)
TTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACT < SRR4302545.7671492/94‑1 (MQ=60)
TGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTT > SRR4302545.9614652/1‑94 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT > SRR4302545.5230229/1‑94 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT < SRR4302545.8314977/94‑1 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT > SRR4302545.2489393/1‑94 (MQ=60)
TCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTC < SRR4302545.4735292/94‑1 (MQ=60)
TCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTC < SRR4302545.3836878/94‑1 (MQ=60)
TCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTC < SRR4302545.3836876/94‑1 (MQ=60)
TCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTC < SRR4302545.73132/94‑1 (MQ=60)
CGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCCACTTTTCG > SRR4302545.2499514/1‑94 (MQ=60)
AAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTTGCA > SRR4302545.5230321/1‑94 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT < SRR4302545.920052/94‑1 (MQ=60)
GATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATG < SRR4302545.5940512/94‑1 (MQ=60)
ATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGT < SRR4302545.10577640/94‑1 (MQ=60)
TAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTC < SRR4302545.3716163/94‑1 (MQ=60)
AGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCA < SRR4302545.1879213/94‑1 (MQ=60)
TTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCAC < SRR4302545.8143974/94‑1 (MQ=60)
TGCAGCGCGAAGCTGGCGGCGGCGGGTGTAGTCGGGTGTTGCGTAATGGTGGGGGTTTCGAACAGGCTGGCGCCAACTTTTCGCATGTCCACGG > SRR4302545.9658097/1‑94 (MQ=60)
GGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGG > SRR4302545.9515324/1‑94 (MQ=60)
GGCAGCGCGAAGCTGGCGGCGGCGGGCGGAGTCGGGTGTTGCGGAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGG > SRR4302545.9724114/1‑94 (MQ=60)
GCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGT < SRR4302545.9171067/94‑1 (MQ=60)
GCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGT < SRR4302545.9154167/94‑1 (MQ=60)
GCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGT < SRR4302545.10331273/94‑1 (MQ=60)
TAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG > SRR4302545.3163952/1‑94 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG < SRR4302545.4246662/94‑1 (MQ=60)
AGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGA < SRR4302545.8544815/94‑1 (MQ=60)
AGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGA > SRR4302545.2640183/1‑94 (MQ=60)
GCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAG < SRR4302545.462298/94‑1 (MQ=60)
GCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAG < SRR4302545.4768155/94‑1 (MQ=60)
GCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAG < SRR4302545.3099009/94‑1 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGACCAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG < SRR4302545.1524417/94‑1 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCCTGTCCACGGTGAGG > SRR4302545.3191779/1‑94 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG > SRR4302545.1373606/1‑94 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG > SRR4302545.3191475/1‑94 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG < SRR4302545.1524418/94‑1 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAAATTTTCGCATGTCCACGGTGAGG > SRR4302545.2944031/1‑94 (MQ=60)
GCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTAGAACAGGCAGGCGCCATCTTTTCGCATGTCCACGGTGAGGC < SRR4302545.3166980/94‑1 (MQ=60)
CGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCG < SRR4302545.512682/94‑1 (MQ=60)
GAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGA > SRR4302545.10457393/1‑94 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302545.6779475/94‑1 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302545.1008330/94‑1 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302545.8583403/94‑1 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302545.2400937/94‑1 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302545.7083822/94‑1 (MQ=60)
TGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCT < SRR4302545.9113379/94‑1 (MQ=60)
GGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTG > SRR4302545.1018160/1‑94 (MQ=60)
GCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGC < SRR4302545.7370364/94‑1 (MQ=60)
CGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCT < SRR4302545.593299/94‑1 (MQ=60)
GGCTGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTT < SRR4302545.2500454/94‑1 (MQ=60)
GGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTT < SRR4302545.10006625/94‑1 (MQ=60)
GGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTT < SRR4302545.4354427/94‑1 (MQ=60)
GGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTT < SRR4302545.3859675/94‑1 (MQ=60)
GGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGGGAGGCGATGCCTGCTT > SRR4302545.4852789/1‑94 (MQ=60)
GCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGGAGGGGCCCACTTTTCGCATGTCCACCGGGAGGCGGTGCCTGCTTC > SRR4302545.4182486/1‑94 (MQ=60)
CGGGGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCC < SRR4302545.2039472/94‑1 (MQ=60)
CGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCC < SRR4302545.6133810/94‑1 (MQ=60)
CGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCC > SRR4302545.8087908/1‑94 (MQ=60)
CGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCC > SRR4302545.2702752/1‑94 (MQ=60)
GGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCC > SRR4302545.5070878/1‑94 (MQ=60)
GGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCA < SRR4302545.7079853/94‑1 (MQ=60)
GGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGATTCCGCCAC > SRR4302545.4247647/1‑94 (MQ=60)
GCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACC > SRR4302545.8483986/1‑94 (MQ=60)
GGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCG < SRR4302545.8347581/94‑1 (MQ=60)
CGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCG > SRR4302545.3991561/1‑94 (MQ=60)
CGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCG > SRR4302545.1306785/1‑94 (MQ=60)
GTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGC > SRR4302545.191699/1‑94 (MQ=60)
GTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGC > SRR4302545.527145/1‑94 (MQ=60)
GTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGC > SRR4302545.6612738/1‑94 (MQ=60)
TAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCT < SRR4302545.1075737/94‑1 (MQ=60)
AGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTC > SRR4302545.4339251/1‑94 (MQ=60)
AGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTC > SRR4302545.3181094/1‑94 (MQ=60)
GTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCA < SRR4302545.2250413/94‑1 (MQ=60)
GTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCA > SRR4302545.3778044/1‑94 (MQ=60)
TCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCAT < SRR4302545.858001/94‑1 (MQ=60)
CGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATC > SRR4302545.4940082/1‑94 (MQ=60)
CGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATC < SRR4302545.5327661/94‑1 (MQ=60)
GGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCG > SRR4302545.8629757/1‑94 (MQ=60)
GGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGC < SRR4302545.7756149/94‑1 (MQ=60)
GGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGC > SRR4302545.6144268/1‑94 (MQ=60)
GGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGC > SRR4302545.9986508/1‑94 (MQ=60)
GTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCC > SRR4302545.2675584/1‑94 (MQ=60)
GTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCC > SRR4302545.3930180/1‑94 (MQ=60)
TGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCC < SRR4302545.4831509/94‑1 (MQ=60)
TGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCC > SRR4302545.2327895/1‑94 (MQ=60)
TGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCC > SRR4302545.4060687/1‑94 (MQ=60)
TTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGG < SRR4302545.7171314/94‑1 (MQ=60)
TGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGA < SRR4302545.8497966/94‑1 (MQ=60)
TGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGA < SRR4302545.5896234/94‑1 (MQ=60)
TGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGA > SRR4302545.3174805/1‑94 (MQ=60)
GCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAA > SRR4302545.5229131/1‑94 (MQ=60)
GCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAA < SRR4302545.3112885/94‑1 (MQ=60)
CGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAC > SRR4302545.2237247/1‑94 (MQ=60)
GTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACT > SRR4302545.10272875/1‑94 (MQ=60)
GTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACT > SRR4302545.1400050/1‑94 (MQ=60)
TAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTT > SRR4302545.5219892/1‑94 (MQ=60)
AATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTG < SRR4302545.7633799/94‑1 (MQ=60)
ATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGC < SRR4302545.9732313/94‑1 (MQ=60)
TGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCC < SRR4302545.9481784/94‑1 (MQ=60)
TGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCC < SRR4302545.9481783/94‑1 (MQ=60)
GGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCG < SRR4302545.7888326/94‑1 (MQ=60)
GGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCG < SRR4302545.7888327/94‑1 (MQ=60)
GGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCG < SRR4302545.6497342/94‑1 (MQ=60)
GTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGG > SRR4302545.3802974/1‑94 (MQ=60)
GTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGG < SRR4302545.9606590/94‑1 (MQ=60)
TGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGG > SRR4302545.2957134/1‑94 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGCACTTGCCGGGC < SRR4302545.7052722/94‑1 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGC < SRR4302545.7786114/94‑1 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCAAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCCCCGCTCATCGCCCGGAACTTGCCGGGC < SRR4302545.6075674/94‑1 (MQ=60)
GTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCG < SRR4302545.6845961/94‑1 (MQ=60)
TGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGC > SRR4302545.3089823/1‑94 (MQ=60)
TGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGC > SRR4302545.1848657/1‑94 (MQ=60)
TGTTTTCGAACAGGCAGGCGCCAACTTTTCCCATGTCCACGGCTAGGCGATGCCTGCTTCGGCCACCCCTCATCACGCGGAACTTGCCCGGCGC > SRR4302545.1848658/1‑94 (MQ=53)
GTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCA < SRR4302545.1801050/94‑1 (MQ=60)
TTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGT > SRR4302545.155149/1‑94 (MQ=60)
TTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGT < SRR4302545.9972623/94‑1 (MQ=60)
TTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGT > SRR4302545.4917985/1‑94 (MQ=60)
TTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTT < SRR4302545.9360048/94‑1 (MQ=60)
TTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTT < SRR4302545.1653184/94‑1 (MQ=60)
TCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTT < SRR4302545.4304482/94‑1 (MQ=60)
CGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTC < SRR4302545.10477267/94‑1 (MQ=60)
CGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTC < SRR4302545.2975958/94‑1 (MQ=60)
CGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTC > SRR4302545.1042235/1‑94 (MQ=60)
CGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTC < SRR4302545.5283898/94‑1 (MQ=60)
AACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAATTTGCCGGGCGCAGTTTCGA < SRR4302545.2089934/94‑1 (MQ=60)
AACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGA > SRR4302545.9077221/1‑94 (MQ=60)
CAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGG > SRR4302545.10409036/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC < SRR4302545.303631/94‑1 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302545.6294520/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302545.8131620/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302545.454970/1‑94 (MQ=60)
CAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGAT > SRR4302545.1576951/1‑94 (MQ=60)
CAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCCGAACTTGCCGGGCGCGGTTTCGAGGCGAG > SRR4302545.2060925/1‑94 (MQ=60)
AGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATG < SRR4302545.5006994/94‑1 (MQ=60)
AGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCAGGCGCAGCTTCGCGGCGATG > SRR4302545.4012060/1‑94 (MQ=60)
GGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGG < SRR4302545.6120/94‑1 (MQ=60)
GCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGG > SRR4302545.3855765/1‑94 (MQ=60)
GCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCACGTAACTTGCCGGGCGCCGTTTCGGGGCGGTGGG > SRR4302545.4111879/1‑94 (MQ=60)
CGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGC > SRR4302545.6346753/1‑94 (MQ=60)
GCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCG > SRR4302545.8170402/1‑94 (MQ=60)
GCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCG < SRR4302545.1175983/94‑1 (MQ=60)
GCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCG < SRR4302545.1175982/94‑1 (MQ=60)
CCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGT > SRR4302545.1967967/1‑94 (MQ=60)
CCAACTTTTCGCATGTCCAC‑GTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTT > SRR4302545.2930945/1‑94 (MQ=60)
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CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTT > NC_000913/2551330‑2551517
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |