Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,551,423 |
T→C |
V60A (GTC→GCC) |
hemF → |
coproporphyrinogen III oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,551,423 | 0 | T | C | 100.0%
| 699.7
/ NA
| 208 | V60A (GTC→GCC) | hemF | coproporphyrinogen III oxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/103); total (105/103) |
Only 100 of 224 total aligned reads displayed.
AATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGG > NC_000913/2551333‑2551512
|
aTTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCaa > 1:5740332/1‑93 (MQ=255)
ttGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACt > 2:1679473/1‑93 (MQ=255)
gTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACttt < 2:6286210/93‑1 (MQ=255)
gTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACttt < 1:372929/93‑1 (MQ=255)
tCGAAGATAGTGGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACtttt < 2:576510/93‑1 (MQ=255)
gAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCg > 2:3083259/1‑93 (MQ=255)
gAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCg > 2:3599273/1‑93 (MQ=255)
aaGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGGTTTCGAACAGGCAGGCGCCAACTTTTCGc > 2:1246132/1‑93 (MQ=255)
aGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCa > 2:447492/1‑93 (MQ=255)
aGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCa < 2:4587648/93‑1 (MQ=255)
gATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAt < 1:646211/93‑1 (MQ=255)
gATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAt < 2:229697/93‑1 (MQ=255)
gATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAt < 1:3408676/93‑1 (MQ=255)
gATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGCGGTTTTGAACCGGCAGGCGCCCACTTTTCGCAt > 2:491419/1‑93 (MQ=255)
aTAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATg < 1:890881/93‑1 (MQ=255)
aTAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGCGTTTTCGAACACGCAGGCGCCCACTTTTCCCATg > 1:3033491/1‑93 (MQ=255)
tAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGt > 1:1353175/1‑93 (MQ=255)
tAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGt < 2:497429/93‑1 (MQ=255)
tAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGCTTTCGAACAGGCAGGCGCCAACTTTTTGCATGt > 2:2078592/1‑93 (MQ=255)
ttGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCa > 2:3630924/1‑93 (MQ=255)
tGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCAc > 1:5586483/1‑93 (MQ=255)
ggCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGGTTTCGAACAGGCAGGCGCCCACTTTTTGCATGTCCACg > 1:2263900/1‑93 (MQ=255)
gCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACgg < 1:601845/93‑1 (MQ=255)
cAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGt < 1:6333315/93‑1 (MQ=255)
gcgcGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTgg > 1:1876410/1‑92 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAg < 1:2848738/93‑1 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAg < 1:2186101/93‑1 (MQ=255)
cgcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAg < 2:1427544/93‑1 (MQ=255)
gcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg > 1:446479/1‑93 (MQ=255)
gcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg > 2:1542109/1‑93 (MQ=255)
gcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg < 1:4847297/93‑1 (MQ=255)
gcgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAgg < 2:5214485/93‑1 (MQ=255)
cgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGc < 2:2598137/93‑1 (MQ=255)
cgAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGc < 1:5451444/93‑1 (MQ=255)
cgAAGCTGGCGGCGGCGGGCGTAGTCGGGCGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGc > 2:1829406/1‑93 (MQ=255)
aaGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGa > 1:2448906/1‑93 (MQ=255)
aaGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGa < 2:1053208/93‑1 (MQ=255)
aaGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGa < 1:4125170/93‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAt > 2:1380639/1‑93 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAt < 2:586670/93‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAt < 1:1518917/93‑1 (MQ=255)
aGCTGGCGGCGGCGGGCGTAGTCGGGGGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAt > 2:4069091/1‑93 (MQ=255)
ggcggcggcGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCt < 1:1244487/93‑1 (MQ=255)
gggcgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTc < 2:547108/92‑1 (MQ=255)
cggcggGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTc < 2:264072/93‑1 (MQ=255)
gcgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCg < 2:341264/93‑1 (MQ=255)
cgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGc > 1:862596/1‑93 (MQ=255)
cgggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGc < 2:2563419/93‑1 (MQ=255)
ggcgTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCa > 1:656944/1‑93 (MQ=255)
gTAGTCGGGTGTTGCGTAATGGTGGGGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCAACGGTGAGGCGATGACTGCTTCCGCCACCg > 1:3493087/1‑93 (MQ=255)
tAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGc > 1:1412809/1‑93 (MQ=255)
gTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTc < 1:3860110/93‑1 (MQ=255)
tCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCa < 1:2752913/93‑1 (MQ=255)
tCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCa > 2:1968425/1‑93 (MQ=255)
gggTGTTGCGTAATGGTGGTGTTTTCGAACATGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCAACGCTCATc > 2:160685/1‑93 (MQ=255)
ggTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCg > 1:1685809/1‑93 (MQ=255)
tgtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGcc < 2:3528882/93‑1 (MQ=255)
gtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGccc > 1:3277096/1‑93 (MQ=255)
gtTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGccc < 2:206103/93‑1 (MQ=255)
ttGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCg > 2:946310/1‑93 (MQ=255)
ttGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCg > 2:1158701/1‑93 (MQ=255)
gCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGa < 1:5938004/93‑1 (MQ=255)
gCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGa > 2:3213073/1‑93 (MQ=255)
gTAATGGTGGTGTTTTCGAACAGGCAGGCGCTAGCTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAc < 2:805187/93‑1 (MQ=255)
gTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCCTCGCCCGGCAc > 1:1104548/1‑93 (MQ=255)
gTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAc > 2:4307892/1‑93 (MQ=255)
tAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACt > 2:1456387/1‑93 (MQ=255)
aaTGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACtt > 2:2167838/1‑93 (MQ=255)
aTGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTg > 1:462689/1‑93 (MQ=255)
aTGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTg > 2:31246/1‑93 (MQ=255)
aTGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTg < 1:904036/93‑1 (MQ=255)
aTGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTg > 2:5835200/1‑93 (MQ=255)
tggtggTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGc > 1:1933513/1‑93 (MQ=255)
gtggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCg < 1:451305/93‑1 (MQ=255)
gtggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCg < 2:4830471/93‑1 (MQ=255)
tggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACTGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCgg < 2:3482829/93‑1 (MQ=255)
tggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCgg > 1:1728289/1‑93 (MQ=255)
ggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGGCCGGAACTTGCCggg > 2:5913886/1‑93 (MQ=255)
ggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCggg > 1:359021/1‑93 (MQ=255)
ggtgTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCggg < 2:5166783/93‑1 (MQ=255)
tgtTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGgcg > 2:2760986/1‑93 (MQ=255)
ttttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCa < 1:2311905/93‑1 (MQ=255)
tttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAg < 1:2609221/93‑1 (MQ=255)
tttCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAg > 1:4767693/1‑93 (MQ=255)
tgtCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAg < 1:5364443/91‑1 (MQ=255)
tgcGAGCAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGt < 2:4722722/91‑1 (MQ=255)
tCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGtt < 2:5650032/93‑1 (MQ=255)
cGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGttt < 2:3685531/93‑1 (MQ=255)
gAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTTAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTc > 1:5874821/1‑93 (MQ=255)
gAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTc < 1:4241873/93‑1 (MQ=255)
aCAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGa < 1:4405499/93‑1 (MQ=255)
aCAGGCAGGCGCCAACTTTTCGCANGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGa < 2:2620635/93‑1 (MQ=255)
caggcaggCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAg > 1:4043650/1‑93 (MQ=255)
ggcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGc > 1:5492353/1‑93 (MQ=255)
gcaggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCg < 2:1781031/93‑1 (MQ=255)
aggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGAt < 1:5286885/93‑1 (MQ=255)
aggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGAt < 2:2901405/93‑1 (MQ=255)
ggcGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATg < 2:3940277/93‑1 (MQ=255)
gcgcCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATgg < 2:6447586/93‑1 (MQ=255)
gcgcCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATgg < 2:4547127/93‑1 (MQ=255)
|
AATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGG > NC_000913/2551333‑2551512
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGT > NC_000913/2551330‑2551516
|
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGC > SRR4302537.5896545/1‑94 (MQ=60)
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGC > SRR4302537.5825762/1‑94 (MQ=60)
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGC < SRR4302537.4662731/94‑1 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCC > SRR4302537.2695805/1‑94 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCC > SRR4302537.2218814/1‑94 (MQ=60)
AGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGGAGTCGGGTGTTGCGTAATGGTGGGGTTTTCGAACAGGCAGGCGCC > SRR4302537.4426236/1‑94 (MQ=60)
AATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAA > SRR4302537.5779638/1‑94 (MQ=60)
TTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACT < SRR4302537.1406167/94‑1 (MQ=60)
TTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACT < SRR4302537.893553/94‑1 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT < SRR4302537.375514/94‑1 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT < SRR4302537.4039943/94‑1 (MQ=60)
GTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTT > SRR4302537.2270787/1‑94 (MQ=60)
CGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCG > SRR4302537.5936069/1‑94 (MQ=60)
GAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGAGCGTAGTCGGGGGTTGCGTAATGGTGGGGATTTCGAACAGGCAGGCGCCAACTTTTCGC > SRR4302537.2473326/1‑94 (MQ=60)
AAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCA > SRR4302537.1304341/1‑94 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT > SRR4302537.3228697/1‑94 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT < SRR4302537.4769681/94‑1 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT > SRR4302537.2551213/1‑94 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGGTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT < SRR4302537.5141827/94‑1 (MQ=60)
AGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGATGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCAT > SRR4302537.4217683/1‑94 (MQ=60)
GATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATG < SRR4302537.650613/94‑1 (MQ=60)
GATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATG < SRR4302537.3432825/94‑1 (MQ=60)
GATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGCGTTTTCGAACACGCAGGCGCCCACTTTTCCCATG > SRR4302537.3054639/1‑94 (MQ=60)
ATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGT < SRR4302537.897017/94‑1 (MQ=60)
ATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGT > SRR4302537.1362600/1‑94 (MQ=60)
AGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGTGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCC < SRR4302537.3695845/94‑1 (MQ=60)
TTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCAC > SRR4302537.5624678/1‑94 (MQ=60)
TTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCAC < SRR4302537.3390145/94‑1 (MQ=60)
TGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACG < SRR4302537.2444546/94‑1 (MQ=60)
TGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGGTTTCGAACAGGCAGGCGCCCACTTTTTGCATGTCCACG > SRR4302537.2279877/1‑94 (MQ=60)
GGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGG < SRR4302537.753074/94‑1 (MQ=60)
GCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGT < SRR4302537.605961/94‑1 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG < SRR4302537.6376617/94‑1 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG > SRR4302537.2755333/1‑94 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG > SRR4302537.6084482/1‑94 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG > SRR4302537.6510351/1‑94 (MQ=60)
CAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTG > SRR4302537.3612649/1‑94 (MQ=60)
AGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGG > SRR4302537.1889463/1‑94 (MQ=60)
GCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAG < SRR4302537.4828890/94‑1 (MQ=60)
GCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCACGTCCACGGTGAG < SRR4302537.1777712/94‑1 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG < SRR4302537.2868687/94‑1 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG > SRR4302537.449576/1‑94 (MQ=60)
CGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGG < SRR4302537.2201502/94‑1 (MQ=60)
GCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGC < SRR4302537.4880746/94‑1 (MQ=60)
CGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCCTGTCCACGGTGAGGCG > SRR4302537.229039/1‑94 (MQ=60)
CGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCG < SRR4302537.5488627/94‑1 (MQ=60)
GAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGA > SRR4302537.2466134/1‑94 (MQ=60)
GAAGCTAGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGA > SRR4302537.6504886/1‑94 (MQ=60)
AAGCTGGCGGCGGGGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAT < SRR4302537.1455762/94‑1 (MQ=60)
AAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGAT < SRR4302537.4153960/94‑1 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG > SRR4302537.3248742/1‑94 (MQ=60)
AGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATG < SRR4302537.1529533/94‑1 (MQ=60)
CTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCC > SRR4302537.545781/1‑94 (MQ=60)
CTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCC > SRR4302537.3453070/1‑94 (MQ=60)
TGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCT < SRR4302537.5496294/94‑1 (MQ=60)
GGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTG < SRR4302537.1253158/94‑1 (MQ=60)
CGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCT > SRR4302537.170637/1‑94 (MQ=60)
CGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCT < SRR4302537.1537588/94‑1 (MQ=60)
GGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCG < SRR4302537.4506707/94‑1 (MQ=60)
GCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGC > SRR4302537.868512/1‑94 (MQ=60)
GGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCA > SRR4302537.661421/1‑94 (MQ=60)
GGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCAC < SRR4302537.295407/94‑1 (MQ=60)
GGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCAACGGTGAGGCGATGCCTGCTTCCGCCAC > SRR4302537.899715/1‑94 (MQ=60)
CGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCG > SRR4302537.2135065/1‑94 (MQ=60)
CGTAGTCGGGTGTTGCGTAATGGTGGGGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCAACGGTGAGGCGATGACTGCTTCCGCCACCG > SRR4302537.3517797/1‑94 (MQ=60)
GTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGC > SRR4302537.1422644/1‑94 (MQ=60)
GTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCA < SRR4302537.3887130/94‑1 (MQ=60)
TCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCAT < SRR4302537.2772124/94‑1 (MQ=60)
GGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCG < SRR4302537.6016656/94‑1 (MQ=60)
GGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCG > SRR4302537.1697611/1‑94 (MQ=60)
GGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCG < SRR4302537.3781976/94‑1 (MQ=60)
GGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGT‑CACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGC < SRR4302537.5367071/94‑1 (MQ=60)
TGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCC > SRR4302537.3300222/1‑94 (MQ=60)
GTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCG < SRR4302537.1161778/94‑1 (MQ=60)
GCGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAA < SRR4302537.5978752/94‑1 (MQ=60)
GGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAC < SRR4302537.191859/94‑1 (MQ=60)
CGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCCTCGCCCGGCAC > SRR4302537.1112176/1‑94 (MQ=60)
CGTAATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAAC < SRR4302537.4457001/94‑1 (MQ=60)
AATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTG < SRR4302537.479553/94‑1 (MQ=60)
AATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTG > SRR4302537.465874/1‑94 (MQ=60)
AATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTG < SRR4302537.3663477/94‑1 (MQ=60)
ATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGC < SRR4302537.910274/94‑1 (MQ=60)
ATGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGC > SRR4302537.1946958/1‑94 (MQ=60)
TGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGGC > SRR4302537.4564586/1‑94 (MQ=60)
TGGTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCC < SRR4302537.5614859/94‑1 (MQ=60)
GTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGG > SRR4302537.1740358/1‑94 (MQ=60)
GTGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGG < SRR4302537.454429/94‑1 (MQ=60)
TGGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGG > SRR4302537.361514/1‑94 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGC > SRR4302537.1650083/1‑94 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGC > SRR4302537.5773524/1‑94 (MQ=60)
GGTGTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGC > SRR4302537.5808694/1‑94 (MQ=60)
GTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCA > SRR4302537.904386/1‑94 (MQ=60)
GTTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCA > SRR4302537.1987145/1‑94 (MQ=60)
TTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAG > SRR4302537.4800616/1‑94 (MQ=60)
TTTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAG < SRR4302537.2328227/94‑1 (MQ=60)
TTTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGT < SRR4302537.2627470/94‑1 (MQ=60)
TGTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGT < SRR4302537.5401159/94‑1 (MQ=60)
TTCGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTT < SRR4302537.4079983/94‑1 (MQ=60)
CGAACAGGCAGGCGCCAACTTTTCGCATGTCCGCGGTGAGGCGATGCCTGCTTCCGCCACCGCTCACCGCCCGGAACTTGCCGGGCGCAGTTTC < SRR4302537.5419640/94‑1 (MQ=60)
CGAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTTAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTC > SRR4302537.5915125/1‑94 (MQ=60)
GAACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCG < SRR4302537.4271366/94‑1 (MQ=60)
ACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAG > SRR4302537.4071926/1‑94 (MQ=60)
ACAGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAG < SRR4302537.4435900/94‑1 (MQ=60)
CAGGCAGGCGCCACCTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGG < SRR4302537.5869088/94‑1 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302537.280253/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302537.5529847/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302537.6449855/1‑94 (MQ=60)
AGGCAGGCGCCAACTTTTCGCATGTCAACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGC > SRR4302537.4330166/1‑94 (MQ=60)
AGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATG < SRR4302537.5323232/94‑1 (MQ=60)
AGGCGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATG < SRR4302537.4179691/94‑1 (MQ=60)
CGCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGC < SRR4302537.6001474/94‑1 (MQ=60)
GCCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCG > SRR4302537.552331/1‑94 (MQ=60)
CCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGT > SRR4302537.2469447/1‑94 (MQ=60)
CCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGT > SRR4302537.4286672/1‑94 (MQ=60)
|
CAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGT > NC_000913/2551330‑2551516
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
