Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,636,193 |
A→G |
G160G (GGT→GGC) |
b2512 ← |
putative dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,636,193 | 0 | A | G | 99.5%
| 645.5
/ ‑5.9
| 192 | G160G (GGT→GGC) | b2512 | putative dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (103/88); minor base C (0/1); total (103/89) |
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
Only 100 of 200 total aligned reads displayed.
AGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGACCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC > NC_000913/2636103‑2636282
|
aGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGcc > 1:670506/1‑93 (MQ=255)
aGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGcc < 2:5470393/93‑1 (MQ=255)
ggCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCg < 2:1117785/93‑1 (MQ=255)
gCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGt < 1:1502361/93‑1 (MQ=255)
cATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTc < 1:1274414/93‑1 (MQ=255)
atatCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCg > 1:1965032/1‑93 (MQ=255)
tatCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGc > 1:4329278/1‑93 (MQ=255)
tatCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGc < 2:3398351/93‑1 (MQ=255)
tCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTg > 2:2494020/1‑93 (MQ=255)
cGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGa < 1:5270955/93‑1 (MQ=255)
cGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGa < 2:5213175/93‑1 (MQ=255)
cGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGa < 2:2158986/93‑1 (MQ=255)
gtttAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGacca < 2:1856522/91‑1 (MQ=255)
ggTTAACTGTCCGTTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGacca > 1:3484653/1‑93 (MQ=255)
ggTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGacca > 1:4876130/1‑93 (MQ=255)
ttAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGaccacc > 1:1397944/1‑93 (MQ=255)
tAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCg > 1:483429/1‑93 (MQ=255)
tAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCg > 1:5074813/1‑93 (MQ=255)
tAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCg < 1:2052128/93‑1 (MQ=255)
tAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCg > 1:5725087/1‑93 (MQ=255)
tAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCg < 2:1090558/93‑1 (MQ=255)
taCTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCgg < 1:1579439/92‑1 (MQ=255)
gTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGgcgc > 2:5406053/1‑93 (MQ=255)
tCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGcgcg > 1:41727/1‑93 (MQ=255)
cATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGaa > 1:284363/1‑93 (MQ=255)
aTTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGaaa < 1:3990424/93‑1 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg > 2:4541164/1‑93 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg < 1:6295419/93‑1 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg > 1:4611653/1‑93 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg > 1:3678566/1‑93 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg < 1:1103745/93‑1 (MQ=255)
tttGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGCGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAg < 1:4548123/93‑1 (MQ=255)
gACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGc > 1:1445268/1‑93 (MQ=255)
gACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGc > 2:4499385/1‑93 (MQ=255)
aCAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCt > 1:1949193/1‑93 (MQ=255)
cgcgcCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTc < 1:5486522/92‑1 (MQ=255)
aGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTc > 2:188130/1‑93 (MQ=255)
ccGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCAccc < 2:4601466/93‑1 (MQ=255)
gTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCcgc > 2:3648688/1‑93 (MQ=255)
tCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCcgcg > 2:4016923/1‑93 (MQ=255)
tCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCcgcg > 1:4934025/1‑93 (MQ=255)
tCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCcgcg > 2:2866947/1‑93 (MQ=255)
aGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGAc > 2:2399872/1‑93 (MQ=255)
aGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGAc > 1:5543072/1‑93 (MQ=255)
gCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACt > 1:3070155/1‑93 (MQ=255)
gCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGCCGCGAAAGTGCTTCACCCGAGACt > 1:2162679/1‑93 (MQ=255)
cTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACtt < 1:2826633/93‑1 (MQ=255)
cTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACtt < 1:4500153/93‑1 (MQ=255)
ttCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACttt > 1:469866/1‑93 (MQ=255)
tCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTa > 1:3211828/1‑93 (MQ=255)
cGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAg < 2:4844500/93‑1 (MQ=255)
gTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGt > 1:4017558/1‑93 (MQ=255)
ttCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAggt > 2:3068775/1‑91 (MQ=255)
ttCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGtt < 1:165234/93‑1 (MQ=255)
ttCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGAGCGAAAGTGCTTCACCCGCGACTTTAGtt < 1:6260003/93‑1 (MQ=255)
tCAGCGCTTGTAACTGGCCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGttt < 2:4729481/93‑1 (MQ=255)
tCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGttt > 1:5996599/1‑93 (MQ=255)
tCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGttt < 2:1179527/93‑1 (MQ=255)
tCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGttt < 2:4391150/93‑1 (MQ=255)
aGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgc > 1:2821091/1‑93 (MQ=255)
gcgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgcc < 2:1493008/93‑1 (MQ=255)
gcgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgcc < 1:1013282/93‑1 (MQ=255)
gcgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGGGCTTCACCCGCGACTTTAGTTtgcc > 2:5623562/1‑93 (MQ=255)
cgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgcca < 2:3721915/93‑1 (MQ=255)
cgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgcca < 2:5252678/93‑1 (MQ=255)
cgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgcca < 1:1068054/93‑1 (MQ=255)
cgcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTcgcca < 2:427863/93‑1 (MQ=255)
gcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgccat < 1:3294591/93‑1 (MQ=255)
gcTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgccat > 1:5237772/1‑93 (MQ=255)
cTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgccatg > 2:3292713/1‑93 (MQ=255)
ttGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgccatgc > 2:6068622/1‑93 (MQ=255)
ttGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTtgacatgc > 2:711902/1‑93 (MQ=255)
tAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCcac < 2:1041653/93‑1 (MQ=255)
tAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCcac > 2:3224192/1‑93 (MQ=255)
tAACTGACCGTTACTGATGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGGGCTTCACCCGCGACTTTAGTTTGCCATGCcac < 2:2932461/93‑1 (MQ=255)
aaCTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCcaca < 1:595447/93‑1 (MQ=255)
aCTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCTAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAg > 1:6177468/1‑93 (MQ=255)
aCTGACCGTTACTGGTGTGGATTAACACAAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAg > 1:870448/1‑93 (MQ=255)
cTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGt > 2:5674750/1‑93 (MQ=255)
cTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGt < 2:1350808/93‑1 (MQ=255)
cTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGt < 1:4236693/93‑1 (MQ=255)
tGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTa < 2:6183193/93‑1 (MQ=255)
gACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTAc < 1:6406733/93‑1 (MQ=255)
aCCGTTACTGGTGTGGGTTAACACCAGTCCGTCGCCGACGACCGGGCGCAAAAGTGCTTCCCCCGCGACTTTAGTTTGCCATGCCACAGTAcc < 2:5512369/93‑1 (MQ=255)
aCCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTAcc > 1:1221942/1‑93 (MQ=255)
ccGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCa > 1:1480214/1‑93 (MQ=255)
cGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCAt > 1:3898293/1‑93 (MQ=255)
tACTGGTGTGGATTAACACAAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTCCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGc < 2:1593662/93‑1 (MQ=255)
aCTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCGATGCCACAGTACCATCGCt < 2:6308620/93‑1 (MQ=255)
tGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTgg > 1:5895449/1‑93 (MQ=255)
tGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTgg > 2:2079140/1‑93 (MQ=255)
ggTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGt < 2:201435/93‑1 (MQ=255)
gATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAg < 1:5758657/93‑1 (MQ=255)
gATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAg > 2:2277380/1‑93 (MQ=255)
aTTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAgc < 2:3803607/93‑1 (MQ=255)
tAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAgcgc > 1:179211/1‑93 (MQ=255)
tAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAgcgc < 2:2960017/93‑1 (MQ=255)
cacCAGGCCGTCGCTGACCACGGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTa < 2:6129143/93‑1 (MQ=255)
ccAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTaaa < 1:2875333/93‑1 (MQ=255)
cAGGCCGTAGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAc > 1:569783/1‑93 (MQ=255)
|
AGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGACCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC > NC_000913/2636103‑2636282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGACCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCTGC > NC_000913/2636100‑2636286
|
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGCTTAACACCAGG > SRR4302537.4910701/1‑94 (MQ=60)
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGG > SRR4302537.4665368/1‑94 (MQ=60)
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGG > SRR4302537.371056/1‑94 (MQ=60)
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGG < SRR4302537.1300042/94‑1 (MQ=60)
GAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGC < SRR4302537.1270499/94‑1 (MQ=60)
AAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCC > SRR4302537.675089/1‑94 (MQ=60)
AAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCC > SRR4302537.4536373/1‑94 (MQ=60)
AAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCC > SRR4302537.6309613/1‑94 (MQ=60)
AGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCG > SRR4302537.1917247/1‑94 (MQ=60)
GGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGT > SRR4302537.4311525/1‑94 (MQ=60)
GCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTC < SRR4302537.1512850/94‑1 (MQ=60)
CATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCG < SRR4302537.1283276/94‑1 (MQ=60)
CATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCG > SRR4302537.1978696/1‑94 (MQ=60)
ATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGC > SRR4302537.4359359/1‑94 (MQ=60)
TATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCT > SRR4302537.5755701/1‑94 (MQ=60)
ATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTG > SRR4302537.3507579/1‑94 (MQ=60)
CGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGAC < SRR4302537.5307232/94‑1 (MQ=60)
CGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGAC < SRR4302537.1968015/94‑1 (MQ=60)
CGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGAC > SRR4302537.929718/1‑94 (MQ=60)
GAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACC > SRR4302537.1460334/1‑94 (MQ=60)
AGGTTAACTGTCCGTTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCA > SRR4302537.3509302/1‑94 (MQ=60)
AGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCA > SRR4302537.4909783/1‑94 (MQ=60)
GGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCAC > SRR4302537.645756/1‑94 (MQ=60)
GGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCAC > SRR4302537.3810321/1‑94 (MQ=60)
GGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCAC > SRR4302537.4711651/1‑94 (MQ=60)
GTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACC > SRR4302537.403864/1‑94 (MQ=60)
GTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACC > SRR4302537.1407687/1‑94 (MQ=60)
TTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCG > SRR4302537.5764277/1‑94 (MQ=60)
TTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCG > SRR4302537.5994806/1‑94 (MQ=60)
TTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCG > SRR4302537.486741/1‑94 (MQ=60)
TTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCG > SRR4302537.5109752/1‑94 (MQ=60)
TAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGG < SRR4302537.2066522/94‑1 (MQ=60)
TACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGG < SRR4302537.1590476/94‑1 (MQ=60)
AACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGG > SRR4302537.4906364/1‑94 (MQ=60)
CTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCG < SRR4302537.5774078/94‑1 (MQ=60)
GTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCG > SRR4302537.42037/1‑94 (MQ=60)
CCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAA > SRR4302537.286345/1‑94 (MQ=60)
ATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAG > SRR4302537.3704446/1‑94 (MQ=60)
ATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAG < SRR4302537.4018365/94‑1 (MQ=60)
ATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAG > SRR4302537.4643585/1‑94 (MQ=60)
TTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.2235742/94‑1 (MQ=60)
TTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.1111366/94‑1 (MQ=60)
TTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.6338545/94‑1 (MQ=60)
TTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.6246843/94‑1 (MQ=60)
TTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGCGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.4579601/94‑1 (MQ=60)
TTTGACAGCGCCATCAGCTTCGTTCAGGGCTTGTAACTGACCGTTTCTGGTATGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGT < SRR4302537.621336/94‑1 (MQ=60)
TTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTG < SRR4302537.5228887/94‑1 (MQ=60)
TGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGC > SRR4302537.1455339/1‑94 (MQ=60)
GACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCT > SRR4302537.6410786/1‑94 (MQ=60)
GACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCT > SRR4302537.1354252/1‑94 (MQ=60)
GACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCT > SRR4302537.1962747/1‑94 (MQ=60)
ACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTT > SRR4302537.5626404/1‑94 (MQ=60)
CAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTC > SRR4302537.286465/1‑94 (MQ=60)
CGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCA < SRR4302537.5523973/94‑1 (MQ=60)
GCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACGGGGCGCGAAAGCGCTTCACCC > SRR4302537.2080726/1‑94 (MQ=60)
GTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCG > SRR4302537.4968056/1‑94 (MQ=60)
CAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGAC > SRR4302537.5580920/1‑94 (MQ=60)
AGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGTTTCACCCGCGACT > SRR4302537.3072204/1‑94 (MQ=60)
AGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACT > SRR4302537.3091549/1‑94 (MQ=60)
AGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGCCGCGAAAGTGCTTCACCCGAGACT > SRR4302537.2177919/1‑94 (MQ=60)
CTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTT > SRR4302537.473085/1‑94 (MQ=60)
CTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTT > SRR4302537.2849006/1‑94 (MQ=60)
CTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTT < SRR4302537.2846389/94‑1 (MQ=60)
CTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTT < SRR4302537.4531276/94‑1 (MQ=60)
TTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTA > SRR4302537.1073471/1‑94 (MQ=60)
TTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTA > SRR4302537.3234420/1‑94 (MQ=60)
TCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTAGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAG < SRR4302537.1598169/94‑1 (MQ=60)
CGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGT > SRR4302537.4045685/1‑94 (MQ=60)
CGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGT > SRR4302537.3287021/1‑94 (MQ=60)
TTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTT < SRR4302537.2844610/94‑1 (MQ=60)
TTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTT > SRR4302537.6037790/1‑94 (MQ=60)
TTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTT < SRR4302537.166411/94‑1 (MQ=60)
TTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGAGCGAAAGTGCTTCACCCGCGACTTTAGTTT < SRR4302537.6302985/94‑1 (MQ=60)
TCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGCCTTTAGGTTG > SRR4302537.709488/1‑94 (MQ=60)
TCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTG < SRR4302537.4602827/94‑1 (MQ=60)
TCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTG < SRR4302537.3934440/94‑1 (MQ=60)
TCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTG < SRR4302537.4321802/94‑1 (MQ=60)
CAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGC > SRR4302537.2840813/1‑94 (MQ=60)
GCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCA < SRR4302537.1020266/94‑1 (MQ=60)
CGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCAT < SRR4302537.1075413/94‑1 (MQ=60)
CGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCAT > SRR4302537.5273810/1‑94 (MQ=60)
GCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATG < SRR4302537.3317878/94‑1 (MQ=60)
AACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCTAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAG > SRR4302537.6220012/1‑94 (MQ=60)
AACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAG < SRR4302537.599519/94‑1 (MQ=60)
AACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAG < SRR4302537.1801934/94‑1 (MQ=60)
AACTGACCGTTACTGGTGTGGATTAACACAAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAG > SRR4302537.876427/1‑94 (MQ=60)
ACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATTCCACAGT > SRR4302537.5058437/1‑94 (MQ=60)
ACTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGT < SRR4302537.1505963/94‑1 (MQ=60)
CTGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTA < SRR4302537.4266165/94‑1 (MQ=60)
TGACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTAC < SRR4302537.4178536/94‑1 (MQ=60)
GACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACC > SRR4302537.1230435/1‑94 (MQ=60)
GACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACC < SRR4302537.6450336/94‑1 (MQ=60)
ACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCA < SRR4302537.5488558/94‑1 (MQ=60)
ACCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCA > SRR4302537.1490509/1‑94 (MQ=60)
CCGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCAT > SRR4302537.3925545/1‑94 (MQ=60)
CGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATC < SRR4302537.4966556/94‑1 (MQ=60)
CGTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATC > SRR4302537.4833612/1‑94 (MQ=60)
CGTCACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCCCCCGCGACTTTAGTTTGCCATGCCACAGTACCATC < SRR4302537.5813976/94‑1 (MQ=60)
GTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCG > SRR4302537.1435327/1‑94 (MQ=60)
GTTACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCG > SRR4302537.5895141/1‑94 (MQ=60)
TACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCT > SRR4302537.6007626/1‑94 (MQ=60)
ACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTG > SRR4302537.3703478/1‑94 (MQ=60)
ACTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTG < SRR4302537.5541746/94‑1 (MQ=60)
CTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGG > SRR4302537.5935899/1‑94 (MQ=60)
CTGGTGTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGG > SRR4302537.2025043/1‑94 (MQ=60)
GTGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTC < SRR4302537.1262785/94‑1 (MQ=60)
TGGATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCA < SRR4302537.1174680/94‑1 (MQ=60)
TGGATTAACACCAGCCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCA < SRR4302537.3108116/94‑1 (MQ=60)
GATTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGC < SRR4302537.5798103/94‑1 (MQ=60)
ATTAACACCCGGCCGGCCCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCG < SRR4302537.5282878/94‑1 (MQ=60)
TTAACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGC > SRR4302537.180488/1‑94 (MQ=60)
ACACCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTA < SRR4302537.1108881/94‑1 (MQ=60)
CCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC < SRR4302537.1571141/94‑1 (MQ=60)
CCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC < SRR4302537.2895512/94‑1 (MQ=60)
CCAGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC < SRR4302537.4480828/94‑1 (MQ=60)
CCAGGCCGTAGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAAC > SRR4302537.573698/1‑94 (MQ=60)
AGGCCGTCGCTGACCTCCGGGCGCGAAAGTGCTTCTCCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCT < SRR4302537.2708285/94‑1 (MQ=60)
AGGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCT > SRR4302537.583511/1‑94 (MQ=60)
GGCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCTG < SRR4302537.1673078/94‑1 (MQ=60)
GCCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCTGC < SRR4302537.3957851/94‑1 (MQ=60)
|
CGAAGGCATATCGAGGTTAACTGTCCATTTGACAGCGCCGTCAGCTTCGTTCAGCGCTTGTAACTGACCGTTACTGGTGTGGATTAACACCAGACCGTCGCTGACCACCGGGCGCGAAAGTGCTTCACCCGCGACTTTAGTTTGCCATGCCACAGTACCATCGCTGGTATTCAGCGCGTAAACCTGC > NC_000913/2636100‑2636286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
