Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,760,511 |
A→T |
W351R (TGG→AGG) |
yfjK ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,760,511 | 0 | A | T | 99.5%
| 695.4
/ ‑4.0
| 196 | W351R (TGG→AGG) | yfjK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (102/93); total (103/93) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 |
Only 100 of 199 total aligned reads displayed.
TGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCAGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCA > NC_000913/2760421‑2760600
|
tGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGt < 2:1477989/93‑1 (MQ=255)
gAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTc > 1:4755835/1‑93 (MQ=255)
aaTTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCg < 2:4323688/93‑1 (MQ=255)
aTTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCgg > 2:2891512/1‑93 (MQ=255)
ttGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAGTCCCTGTCGGc < 1:839606/93‑1 (MQ=255)
tGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCa < 2:1053963/93‑1 (MQ=255)
cGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGa < 1:295470/93‑1 (MQ=255)
cGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGa > 1:3909000/1‑93 (MQ=255)
gCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAAc > 2:5649953/1‑93 (MQ=255)
cAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAAct < 2:2487921/93‑1 (MQ=255)
cAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAAct < 1:4211641/93‑1 (MQ=255)
gtgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAActct > 2:6286220/1‑93 (MQ=255)
gtgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAActct > 2:2262134/1‑93 (MQ=255)
gtgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAActct > 1:583100/1‑93 (MQ=255)
gtgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAActct > 2:5295572/1‑93 (MQ=255)
tgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCtt < 2:6235341/93‑1 (MQ=255)
tgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCtt < 2:1569579/93‑1 (MQ=255)
tgtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCtt > 1:1988534/1‑93 (MQ=255)
gtATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTc < 2:1469500/93‑1 (MQ=255)
tATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCg > 1:6367901/1‑93 (MQ=255)
ttGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCt > 2:2561010/1‑93 (MQ=255)
ttGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCt > 1:4112724/1‑93 (MQ=255)
ttGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCt > 1:4434052/1‑93 (MQ=255)
gctgcAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGa > 1:5414334/1‑93 (MQ=255)
ctgcAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGAc > 2:4247918/1‑93 (MQ=255)
gcAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGAccc < 1:684968/93‑1 (MQ=255)
gcAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGAccc < 1:1863951/93‑1 (MQ=255)
cAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCa < 1:1820974/93‑1 (MQ=255)
aGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAg > 2:4464002/1‑93 (MQ=255)
gTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGt > 2:5858818/1‑93 (MQ=255)
gTGCCCGCGGTAGCCCGCCAGAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGt < 2:4828649/93‑1 (MQ=255)
cccTTGGTAGCCGGCCAAAATGCAAGCCAATTCCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGa < 2:300203/93‑1 (MQ=255)
cccTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGa > 1:653379/1‑93 (MQ=255)
ccTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGATCCAGTCGAc > 1:138158/1‑93 (MQ=255)
ccTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGAc > 1:2902833/1‑93 (MQ=255)
ccTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGAc > 1:2009805/1‑93 (MQ=255)
cTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACa > 1:1540377/1‑93 (MQ=255)
cTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACa < 2:4647069/93‑1 (MQ=255)
cTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACa > 2:6030022/1‑93 (MQ=255)
cTCGGCACCCCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACa < 1:1089029/93‑1 (MQ=255)
tCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACAt > 1:399046/1‑93 (MQ=255)
tCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACAt > 1:2176397/1‑93 (MQ=255)
ggTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATgg < 1:6042675/93‑1 (MQ=255)
ggTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATgg < 2:3130958/93‑1 (MQ=255)
ggTAGCGCGCAAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATgg < 2:2720890/93‑1 (MQ=255)
gTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATggg < 1:2807599/93‑1 (MQ=255)
tAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATgggg > 2:3289678/1‑93 (MQ=255)
aGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGa < 1:3614656/93‑1 (MQ=255)
gcgcgcCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGAt < 1:2057722/93‑1 (MQ=255)
gcgcCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATtc < 2:3703663/93‑1 (MQ=255)
gcgcCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATtc < 2:5074617/93‑1 (MQ=255)
cgcCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATtct > 1:3162919/1‑93 (MQ=255)
ccAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCa < 2:1754215/93‑1 (MQ=255)
aaTGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCg > 2:5022033/1‑93 (MQ=255)
aaTGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCg < 1:3498512/93‑1 (MQ=255)
atgcatgcCATTACCGTTTCTAAGGGTGACAGTGTAATCCCTTTCGGCATCGAATTCCTCGCTGATCCAGTCGTCACTTTGATTCTCAGGCgg > 2:6466067/1‑93 (MQ=255)
tGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGa < 1:3129540/93‑1 (MQ=255)
tGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGa < 2:59323/93‑1 (MQ=255)
gCAAGCCAATACCGTTTCTAAGGTCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAg > 2:188183/1‑93 (MQ=255)
gCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAg < 2:2802439/93‑1 (MQ=255)
gCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAg > 1:731365/1‑93 (MQ=255)
cAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATTCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGAGGATTCTCAGTCGGAgg > 1:922077/1‑92 (MQ=255)
cAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGt < 2:4518428/93‑1 (MQ=255)
aGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGc > 2:1315943/1‑93 (MQ=255)
ccAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCa > 1:2444805/1‑93 (MQ=255)
tACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGcc > 2:682399/1‑93 (MQ=255)
tACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGcc > 2:697086/1‑93 (MQ=255)
tACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGcc < 2:574372/93‑1 (MQ=255)
aCCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGccc > 2:2074268/1‑93 (MQ=255)
ccGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCa > 1:4967729/1‑93 (MQ=255)
ccGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCa > 1:551103/1‑93 (MQ=255)
cGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCaa < 2:4681117/93‑1 (MQ=255)
cGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCaa < 2:6296997/93‑1 (MQ=255)
gTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAg > 2:2588838/1‑93 (MQ=255)
gTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAg > 1:3595350/1‑93 (MQ=255)
gTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCCCTCGCCCAGTCGACATGGCGATTCTCAGTCGCAGGGCCATGCCCAAg > 2:1416763/1‑93 (MQ=255)
tttCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGc > 2:4989123/1‑93 (MQ=255)
ttCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGcc > 2:3601235/1‑93 (MQ=255)
tCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCt > 1:6194741/1‑93 (MQ=255)
tCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCt < 1:3348941/93‑1 (MQ=255)
tCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCt < 2:1930520/93‑1 (MQ=255)
tAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGa < 1:2149281/93‑1 (MQ=255)
gggCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCa < 1:3555862/93‑1 (MQ=255)
gggCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCa < 1:136784/93‑1 (MQ=255)
gggCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCa > 2:2970572/1‑93 (MQ=255)
ggCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAg < 2:5414334/93‑1 (MQ=255)
gCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGc < 1:2039341/93‑1 (MQ=255)
cGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCt < 1:1217529/93‑1 (MQ=255)
aCTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcg > 1:3959651/1‑93 (MQ=255)
aCTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcg > 2:4159227/1‑93 (MQ=255)
tgtgTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcgcg > 1:880960/1‑93 (MQ=255)
tgtgTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcgcg < 1:1024091/93‑1 (MQ=255)
gtgtAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcgcgc > 1:5325994/1‑93 (MQ=255)
tgtAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTcgcgcg > 1:2355047/1‑93 (MQ=255)
tAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGcc > 1:6309210/1‑93 (MQ=255)
tAATCCCTGTCGGCATCGAACTCTTCGCTGACCAAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGcc < 2:4490751/93‑1 (MQ=255)
tCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGccacc > 1:3740501/1‑93 (MQ=255)
cccTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGccacca < 1:5599901/93‑1 (MQ=255)
cccTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGccacca < 1:2685145/93‑1 (MQ=255)
cccTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGccacca < 1:2282313/93‑1 (MQ=255)
|
TGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCAGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCA > NC_000913/2760421‑2760600
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCAGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGGCC > NC_000913/2760418‑2760604
|
CATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCT > SRR4302537.3482610/1‑94 (MQ=60)
CATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCT < SRR4302537.171661/94‑1 (MQ=60)
ATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTG > SRR4302537.3029004/1‑94 (MQ=60)
ATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTG > SRR4302537.2136073/1‑94 (MQ=60)
TGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTC > SRR4302537.4788691/1‑94 (MQ=60)
taagTGGTCGGGAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGAAAAACTGCAAGCCAATACGGTTTCTAAGGGCGACTGTGTAATCCCTGTCG < SRR4302537.3870793/90‑1 (MQ=60)
GAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCG < SRR4302537.2223741/94‑1 (MQ=60)
TTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAGTCCCTGTCGGCA < SRR4302537.845359/94‑1 (MQ=60)
GGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATC < SRR4302537.4802337/94‑1 (MQ=60)
TCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGA > SRR4302537.3936326/1‑94 (MQ=60)
CGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAA < SRR4302537.297529/94‑1 (MQ=60)
CAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTC < SRR4302537.4241015/94‑1 (MQ=60)
AGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCT > SRR4302537.288754/1‑94 (MQ=60)
AGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCT > SRR4302537.587087/1‑94 (MQ=60)
GTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTT > SRR4302537.927060/1‑94 (MQ=60)
GTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTT > SRR4302537.2002359/1‑94 (MQ=60)
TGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTC > SRR4302537.2577956/1‑94 (MQ=60)
TGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTC > SRR4302537.6502715/1‑94 (MQ=60)
GTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCG < SRR4302537.3021864/94‑1 (MQ=60)
GTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCG > SRR4302537.6411332/1‑94 (MQ=60)
ATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCT > SRR4302537.1948456/1‑94 (MQ=60)
ATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCT > SRR4302537.4464669/1‑94 (MQ=60)
ATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCT > SRR4302537.4141454/1‑94 (MQ=60)
TGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGA < SRR4302537.1849680/94‑1 (MQ=60)
TGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGA > SRR4302537.5451247/1‑94 (MQ=60)
CTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACC < SRR4302537.724867/94‑1 (MQ=60)
TGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCC > SRR4302537.3596021/1‑94 (MQ=60)
TGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCC > SRR4302537.3626658/1‑94 (MQ=60)
GCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCA > SRR4302537.2778314/1‑94 (MQ=60)
GCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCA < SRR4302537.1876930/94‑1 (MQ=60)
GCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCA < SRR4302537.689670/94‑1 (MQ=60)
CAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAG < SRR4302537.1833667/94‑1 (MQ=60)
CAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAG < SRR4302537.6401705/94‑1 (MQ=60)
GTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTC < SRR4302537.1387567/94‑1 (MQ=60)
gcCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCG < SRR4302537.3957348/92‑1 (MQ=60)
GCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGA > SRR4302537.657832/1‑94 (MQ=60)
GCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGA > SRR4302537.1188318/1‑94 (MQ=60)
CCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGATCCAGTCGAC > SRR4302537.139149/1‑94 (MQ=60)
CCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGAC > SRR4302537.2023812/1‑94 (MQ=60)
CCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGAC > SRR4302537.2923226/1‑94 (MQ=60)
CCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACA > SRR4302537.1551126/1‑94 (MQ=60)
CCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACA < SRR4302537.2163615/94‑1 (MQ=60)
ctcggcacccCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACAT < SRR4302537.1096553/84‑1 (MQ=60)
CTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACAT > SRR4302537.2191736/1‑94 (MQ=60)
CTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACAT > SRR4302537.401814/1‑94 (MQ=60)
CGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTGGCTGACCCAGTCGACATGG < SRR4302537.3244434/94‑1 (MQ=60)
GGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGG < SRR4302537.6084182/94‑1 (MQ=60)
GTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGG < SRR4302537.2827227/94‑1 (MQ=60)
TAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGA < SRR4302537.682750/94‑1 (MQ=60)
AGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGAT < SRR4302537.3640136/94‑1 (MQ=60)
GCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATT < SRR4302537.2072169/94‑1 (MQ=60)
GCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATC > SRR4302537.409831/1‑94 (MQ=60)
GCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCT > SRR4302537.3185125/1‑94 (MQ=60)
GCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCA > SRR4302537.1675788/1‑94 (MQ=60)
GCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCA > SRR4302537.4008417/1‑94 (MQ=60)
CCAAAAAGCAAGCCAATACCGTTTCTAGCGGCGGCTGGGTAATCCCTGACGGCATCGAACTCTCCGCTGACACAGTCGACATGGGGACTCGCAG > SRR4302537.1976693/1‑94 (MQ=38)
CAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGT > SRR4302537.616836/1‑94 (MQ=60)
AAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCAGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCG > SRR4302537.3496316/1‑94 (MQ=60)
AATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGG < SRR4302537.3523265/94‑1 (MQ=60)
AATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGG > SRR4302537.3839394/1‑94 (MQ=60)
TGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAG > SRR4302537.736357/1‑94 (MQ=60)
TGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAG < SRR4302537.992634/94‑1 (MQ=60)
TGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAG < SRR4302537.3151477/94‑1 (MQ=60)
GCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATTCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGAGGATTCTCAGTCGGAGG > SRR4302537.928444/1‑94 (MQ=60)
AAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGC > SRR4302537.2408470/1‑94 (MQ=60)
GCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCA > SRR4302537.2462011/1‑94 (MQ=60)
CCAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCAT > SRR4302537.3165274/1‑94 (MQ=60)
CAATGCCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATG < SRR4302537.5668807/94‑1 (MQ=60)
CAATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATG > SRR4302537.1375519/1‑94 (MQ=60)
ATACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCC < SRR4302537.4323120/94‑1 (MQ=60)
TACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCC < SRR4302537.541009/94‑1 (MQ=60)
ACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCA > SRR4302537.554894/1‑94 (MQ=60)
ACCGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCA > SRR4302537.5001966/1‑94 (MQ=60)
CGTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAG > SRR4302537.3620691/1‑94 (MQ=60)
GTTTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGC > SRR4302537.2059217/1‑94 (MQ=60)
TTCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCT > SRR4302537.6237429/1‑94 (MQ=60)
TCTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTG < SRR4302537.3372648/94‑1 (MQ=60)
CTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGA > SRR4302537.1534822/1‑94 (MQ=60)
CTAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGACTGA > SRR4302537.5909478/1‑94 (MQ=60)
TAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGAT < SRR4302537.2164429/94‑1 (MQ=60)
TAAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGAT > SRR4302537.2370299/1‑94 (MQ=60)
AAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATC > SRR4302537.5094693/1‑94 (MQ=60)
AAGGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGGGCCATGCCCAAGCCTGATA > SRR4302537.555865/1‑94 (MQ=60)
GGGCGACTGTGTAATCCCTGTCGGCCTCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAG < SRR4302537.6290435/94‑1 (MQ=60)
GGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAG < SRR4302537.137760/94‑1 (MQ=60)
GGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAG > SRR4302537.740766/1‑94 (MQ=60)
GGGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAG < SRR4302537.3580959/94‑1 (MQ=60)
GGCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGC < SRR4302537.2925204/94‑1 (MQ=60)
GCGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCT < SRR4302537.2053569/94‑1 (MQ=60)
CGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTC < SRR4302537.1225995/94‑1 (MQ=60)
CGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTC < SRR4302537.4158439/94‑1 (MQ=60)
CGACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTC > SRR4302537.5502036/1‑94 (MQ=60)
GACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCG > SRR4302537.2018550/1‑94 (MQ=60)
GACTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCG > SRR4302537.3987355/1‑94 (MQ=60)
CTGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCG > SRR4302537.887020/1‑94 (MQ=60)
TGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGC < SRR4302537.1031138/94‑1 (MQ=60)
TGTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGC > SRR4302537.5362538/1‑94 (MQ=60)
GTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCG > SRR4302537.2371651/1‑94 (MQ=60)
GTGTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCG < SRR4302537.846447/94‑1 (MQ=60)
GTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCC > SRR4302537.2033536/1‑94 (MQ=60)
GTAATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCC > SRR4302537.6352409/1‑94 (MQ=60)
AATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCAC > SRR4302537.353016/1‑94 (MQ=60)
ATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCATC > SRR4302537.4771771/1‑94 (MQ=60)
ATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACC > SRR4302537.2180791/1‑94 (MQ=60)
ATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACC > SRR4302537.3664026/1‑94 (MQ=60)
ATCCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACC > SRR4302537.3766771/1‑94 (MQ=60)
CCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAG < SRR4302537.2703889/94‑1 (MQ=60)
CCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAG < SRR4302537.2298417/94‑1 (MQ=60)
CCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAG > SRR4302537.5242005/1‑94 (MQ=60)
CCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAG > SRR4302537.5905611/1‑94 (MQ=60)
CCCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAG < SRR4302537.5638183/94‑1 (MQ=60)
CCTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGG > SRR4302537.1621231/1‑94 (MQ=60)
CTGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGGC > SRR4302537.3974539/1‑94 (MQ=60)
TGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGGCC > SRR4302537.3039090/1‑94 (MQ=60)
TGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGGCC < SRR4302537.5479835/94‑1 (MQ=60)
|
CATTGAATTGGTCGGCAGTGTATTGCTGCAGTGCCCTCGGTAGCGCGCCAAAATGCAAGCCAATACCGTTTCTAAGGGCGACTGTGTAATCCCAGTCGGCATCGAACTCTTCGCTGACCCAGTCGACATGGGGATTCTCAGTCGGAGTGCCATGCCCAAGCCTGATCAGCTCGCGCGCCACCAGGCC > NC_000913/2760418‑2760604
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
