Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,766,771 |
T→C |
V29A (GTG→GCG) |
yfjQ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,766,771 | 0 | T | C | 100.0%
| 747.2
/ NA
| 216 | V29A (GTG→GCG) | yfjQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/100); total (116/100) |
Only 100 of 231 total aligned reads displayed.
TGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGC > NC_000913/2766681‑2766860
|
tGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGgcgc > 1:362801/1‑93 (MQ=255)
tGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGgcgc > 1:4142746/1‑93 (MQ=255)
cTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGccc < 2:2173486/93‑1 (MQ=255)
ttATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCa > 2:1808847/1‑93 (MQ=255)
ttATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCa < 2:4938838/93‑1 (MQ=255)
tATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAg < 1:2468612/93‑1 (MQ=255)
aTGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGc < 1:5323270/93‑1 (MQ=255)
aTGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGc < 2:30395/93‑1 (MQ=255)
gACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGt > 1:4688602/1‑93 (MQ=255)
aCCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTa > 1:1611644/1‑93 (MQ=255)
aCCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTa < 1:329730/93‑1 (MQ=255)
aCCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTa < 2:5242017/93‑1 (MQ=255)
ccGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTAtt > 2:3238128/1‑93 (MQ=255)
ccGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTAtt > 1:5415273/1‑93 (MQ=255)
ccGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTAtt > 1:1330536/1‑93 (MQ=255)
cGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTTGCGCCGAGCGTATTc > 2:3460051/1‑93 (MQ=255)
cGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTc < 1:1808847/93‑1 (MQ=255)
cGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGGTATTTCGCGTGGCGCCCAGCGTAttg > 1:5252900/1‑92 (MQ=255)
gTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCa < 1:3512452/93‑1 (MQ=255)
tCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAg < 1:5122966/93‑1 (MQ=255)
tCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTCGCGCCCAGCGTATTCAg > 1:1087637/1‑93 (MQ=255)
ggCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGa > 1:4934148/1‑93 (MQ=255)
ggCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGa < 1:2441286/93‑1 (MQ=255)
gCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAg > 1:6181584/1‑93 (MQ=255)
cTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAgg > 2:1699291/1‑93 (MQ=255)
cTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAgg > 2:65558/1‑93 (MQ=255)
cTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAgg < 2:3880681/93‑1 (MQ=255)
gcgcTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATaa < 2:466300/93‑1 (MQ=255)
gcTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAac < 1:1293144/93‑1 (MQ=255)
gcTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAac < 2:6044543/93‑1 (MQ=255)
gcTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAac < 2:3200051/93‑1 (MQ=255)
gcTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAac > 1:6273550/1‑93 (MQ=255)
cTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAaca < 2:2485586/93‑1 (MQ=255)
cTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAaca < 1:6037476/93‑1 (MQ=255)
cTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAaca > 2:4103889/1‑93 (MQ=255)
tttGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAacac > 1:5823411/1‑93 (MQ=255)
tttGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAacac > 1:5570601/1‑93 (MQ=255)
tttGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAacac > 1:2865726/1‑93 (MQ=255)
gcgcTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAAt < 1:6177583/93‑1 (MQ=255)
cgcTGCAAATCTTATTCGCCGTGACCGTCCGTTATCCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATc < 2:1582678/93‑1 (MQ=255)
gcTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATcc > 1:5733096/1‑93 (MQ=255)
cTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATccc < 1:2590391/93‑1 (MQ=255)
gCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGc < 1:2172082/93‑1 (MQ=255)
aaaTCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAg > 2:4306305/1‑93 (MQ=255)
aaaTCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAg < 1:698573/93‑1 (MQ=255)
aaTCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGt > 2:1253649/1‑93 (MQ=255)
tCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGa < 2:5766366/93‑1 (MQ=255)
tCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGa > 1:1971420/1‑93 (MQ=255)
tCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAAAACGAATCCCGCCGTGa > 2:6152924/1‑93 (MQ=255)
cTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGaa < 2:1325798/93‑1 (MQ=255)
tATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACg > 2:584605/1‑93 (MQ=255)
aTTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGc > 1:3394685/1‑93 (MQ=255)
ttCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCt > 2:3375919/1‑93 (MQ=255)
ccGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTacac > 2:1051636/1‑93 (MQ=255)
tGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGta > 2:3283417/1‑93 (MQ=255)
tGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGta < 1:3730327/93‑1 (MQ=255)
aCCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGtata < 1:1039678/93‑1 (MQ=255)
ccgtccgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGtatat > 2:6119674/1‑93 (MQ=255)
cgtccgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGtatata > 2:4951370/1‑93 (MQ=255)
gtccgtTAACCCGTGAAGAGTTATTTCGCGCGGCGCCCAGAGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATAc > 2:1139041/1‑93 (MQ=255)
tccgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATAcc < 2:737627/93‑1 (MQ=255)
tccgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATAcc < 1:505772/93‑1 (MQ=255)
tccgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATAcc > 1:4044666/1‑93 (MQ=255)
cgtTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGGTACACGTATATACCca > 2:1106579/1‑93 (MQ=255)
ttAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCcaca > 2:4380910/1‑93 (MQ=255)
tAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACaa < 1:4604531/93‑1 (MQ=255)
tAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACaa < 2:5154475/93‑1 (MQ=255)
aaCCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAt < 2:6333332/93‑1 (MQ=255)
aaCCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAt > 2:4242863/1‑93 (MQ=255)
aCCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTCAACGCTACACGTATATACTCACAAtt > 1:3939406/1‑93 (MQ=255)
cccGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCGCAAttt < 2:2566336/93‑1 (MQ=255)
cccGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAttt < 2:2716016/93‑1 (MQ=255)
ccGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTc > 1:5178383/1‑93 (MQ=255)
cGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTcc > 2:2252733/1‑93 (MQ=255)
gTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTccc < 2:4740846/93‑1 (MQ=255)
gTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTccc > 1:4267969/1‑93 (MQ=255)
tGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCct < 2:4899413/93‑1 (MQ=255)
gAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctg > 1:4580995/1‑93 (MQ=255)
gAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctg > 2:3794206/1‑93 (MQ=255)
aaGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgc > 1:1376995/1‑93 (MQ=255)
agagTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgct > 1:5500490/1‑93 (MQ=255)
agagTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgct < 1:2709719/93‑1 (MQ=255)
gagTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgctg < 2:13643/93‑1 (MQ=255)
gagTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgctg > 1:1772084/1‑93 (MQ=255)
gagTTATTTCGCGTGGCGCCCAGCGTACTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCctgctg > 1:5686279/1‑93 (MQ=255)
agTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTgg > 2:5469239/1‑93 (MQ=255)
ttATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGAc > 2:4445034/1‑93 (MQ=255)
ttATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGAc > 1:1667358/1‑93 (MQ=255)
tATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACa < 2:3650802/93‑1 (MQ=255)
tATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACa > 2:4809851/1‑93 (MQ=255)
tATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACa > 2:3909493/1‑93 (MQ=255)
tttCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGc < 1:3153427/93‑1 (MQ=255)
tCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCt < 2:5696488/93‑1 (MQ=255)
tCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCt < 1:2963411/93‑1 (MQ=255)
cgcgTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTg > 1:5962115/1‑93 (MQ=255)
cgcgTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATAACCACAATTTCCCTGCTGGACCGCCTg > 2:1562767/1‑93 (MQ=255)
gcgTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGc > 2:5294771/1‑93 (MQ=255)
cgTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCa < 2:4557486/93‑1 (MQ=255)
gtggcgCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAg > 1:763516/1‑93 (MQ=255)
tggcgCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGc < 2:3215705/93‑1 (MQ=255)
|
TGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGC > NC_000913/2766681‑2766860
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGA > NC_000913/2766678‑2766864
|
GTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGC > SRR4302537.5908755/1‑94 (MQ=60)
GTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGC < SRR4302537.4793302/94‑1 (MQ=60)
CTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGC > SRR4302537.6146090/1‑94 (MQ=60)
CTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGC > SRR4302537.365323/1‑94 (MQ=60)
CTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGC > SRR4302537.4171644/1‑94 (MQ=60)
CTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCATATCTTATTCGCCGAGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCA < SRR4302537.3487649/94‑1 (MQ=60)
CTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCA > SRR4302537.289149/1‑94 (MQ=60)
CTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCA > SRR4302537.1356453/1‑94 (MQ=60)
TATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGC < SRR4302537.2485967/94‑1 (MQ=60)
TATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGC < SRR4302537.5347617/94‑1 (MQ=60)
ATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCG < SRR4302537.5359804/94‑1 (MQ=60)
TGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGT > SRR4302537.4721037/1‑94 (MQ=60)
GACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTA > SRR4302537.1622908/1‑94 (MQ=60)
GACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTA < SRR4302537.742080/94‑1 (MQ=60)
ACCCGTCTGGCTTCGCGCTTTGGCGTTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTAT < SRR4302537.6289732/94‑1 (MQ=60)
ACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTAT < SRR4302537.332016/94‑1 (MQ=60)
CCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATT > SRR4302537.5452195/1‑94 (MQ=60)
CCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATT > SRR4302537.5799653/1‑94 (MQ=60)
CCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATT > SRR4302537.5452194/1‑94 (MQ=60)
CCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATT > SRR4302537.1339810/1‑94 (MQ=60)
CCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGGTATTTCGCGTGGCGCCCAGCGTATTG > SRR4302537.5289047/1‑94 (MQ=60)
CGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCA < SRR4302537.1791771/94‑1 (MQ=60)
CGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCA > SRR4302537.1553877/1‑94 (MQ=60)
CGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCA < SRR4302537.2424362/94‑1 (MQ=60)
CGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCA < SRR4302537.1821464/94‑1 (MQ=60)
GTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAG < SRR4302537.3537300/94‑1 (MQ=60)
GTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTCGCGCCCAGCGTATTCAG > SRR4302537.1095146/1‑94 (MQ=60)
TCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGT < SRR4302537.5158274/94‑1 (MQ=60)
TCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGT < SRR4302537.4276242/94‑1 (MQ=60)
TCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGT < SRR4302537.5669113/94‑1 (MQ=60)
CTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTG < SRR4302537.2682868/94‑1 (MQ=60)
CTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTG > SRR4302537.5191032/1‑94 (MQ=60)
TGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGA > SRR4302537.4968180/1‑94 (MQ=60)
GGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAG > SRR4302537.6224163/1‑94 (MQ=60)
GGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAG < SRR4302537.2458473/94‑1 (MQ=60)
GGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAG > SRR4302537.6224162/1‑94 (MQ=60)
CTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGA > SRR4302537.5754880/1‑94 (MQ=60)
TTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGAT < SRR4302537.3450498/94‑1 (MQ=60)
TCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATA > SRR4302537.2473804/1‑94 (MQ=60)
CGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAA > SRR4302537.3584189/1‑94 (MQ=60)
CGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAA > SRR4302537.4674390/1‑94 (MQ=60)
GCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAA > SRR4302537.2009976/1‑94 (MQ=60)
CGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAAC < SRR4302537.1303213/94‑1 (MQ=60)
CGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAAC > SRR4302537.6316598/1‑94 (MQ=60)
CGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGACCAGCGTATTCAGTGAGGATAAAC < SRR4302537.6269269/94‑1 (MQ=60)
GCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACA > SRR4302537.5383758/1‑94 (MQ=60)
GCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACA < SRR4302537.1302135/94‑1 (MQ=60)
GCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACA < SRR4302537.369034/94‑1 (MQ=60)
CTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACAC > SRR4302537.5608676/1‑94 (MQ=60)
CTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACAC > SRR4302537.2885826/1‑94 (MQ=60)
CTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACAC > SRR4302537.5863319/1‑94 (MQ=60)
CTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACAC < SRR4302537.6078954/94‑1 (MQ=60)
GCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATC < SRR4302537.6220128/94‑1 (MQ=60)
CGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCC > SRR4302537.5772344/1‑94 (MQ=60)
CTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCG < SRR4302537.2608516/94‑1 (MQ=60)
TGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGC < SRR4302537.4200648/94‑1 (MQ=60)
GCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCA < SRR4302537.2187394/94‑1 (MQ=60)
GCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCA < SRR4302537.278926/94‑1 (MQ=60)
AAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGT < SRR4302537.703357/94‑1 (MQ=60)
ATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGA > SRR4302537.1985131/1‑94 (MQ=60)
ATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGAATTCAGTGAGGATAAACACGAATCCCGCAGTGA > SRR4302537.5279780/1‑94 (MQ=60)
TCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAA < SRR4302537.3836042/94‑1 (MQ=60)
TTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACG > SRR4302537.1090166/1‑94 (MQ=60)
TATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGC > SRR4302537.3418733/1‑94 (MQ=60)
ATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCA > SRR4302537.768985/1‑94 (MQ=60)
TTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTA < SRR4302537.3985067/94‑1 (MQ=60)
TCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTAC > SRR4302537.5108901/1‑94 (MQ=60)
CGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACA > SRR4302537.5903507/1‑94 (MQ=60)
CGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACA < SRR4302537.5977229/94‑1 (MQ=60)
GCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACAC < SRR4302537.1707482/94‑1 (MQ=60)
CCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACG > SRR4302537.5387777/1‑94 (MQ=60)
CGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGT > SRR4302537.1364405/1‑94 (MQ=60)
GTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTA > SRR4302537.3928273/1‑94 (MQ=60)
TGACCGTCTGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTAT < SRR4302537.6031621/94‑1 (MQ=60)
TGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTAT < SRR4302537.3756531/94‑1 (MQ=60)
GACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATA > SRR4302537.3021513/1‑94 (MQ=60)
ACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATAT < SRR4302537.1046833/94‑1 (MQ=60)
ACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATACCGCAGTGAACGCTACACGCATAT > SRR4302537.4844389/1‑94 (MQ=60)
GTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCTCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACC < SRR4302537.1142151/94‑1 (MQ=60)
GTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACC > SRR4302537.4072949/1‑94 (MQ=60)
GTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACC < SRR4302537.3348125/94‑1 (MQ=60)
TCCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCC < SRR4302537.509244/94‑1 (MQ=60)
CCGTTAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCA > SRR4302537.2557894/1‑94 (MQ=60)
cttagCCCGTGAAGAGTTATTTCGCGTGGCGCCCCGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACA < SRR4302537.1664865/89‑1 (MQ=60)
TAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAT < SRR4302537.1982512/94‑1 (MQ=60)
TAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAT < SRR4302537.6351331/94‑1 (MQ=60)
TAACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAAT < SRR4302537.4636412/94‑1 (MQ=60)
AACCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTCAACGCTACACGTATATACTCACAATT > SRR4302537.3966943/1‑94 (MQ=60)
CCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACTAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTC < SRR4302537.2499391/94‑1 (MQ=60)
CCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTC > SRR4302537.4631755/1‑94 (MQ=60)
CCCGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTC > SRR4302537.5214020/1‑94 (MQ=60)
CGTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCC > SRR4302537.4297621/1‑94 (MQ=60)
GTGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCT < SRR4302537.1744971/94‑1 (MQ=60)
TGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTG > SRR4302537.3103303/1‑94 (MQ=60)
TGAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTG > SRR4302537.4612684/1‑94 (MQ=60)
GAAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGC > SRR4302537.1386611/1‑94 (MQ=60)
AAGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCT > SRR4302537.5538052/1‑94 (MQ=60)
AGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTG > SRR4302537.1784428/1‑94 (MQ=60)
AGAGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTG < SRR4302537.2728643/94‑1 (MQ=60)
AGAGTTATTTCGCGTGGCGCCCAGCGTACTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTG > SRR4302537.5725171/1‑94 (MQ=60)
AGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGA > SRR4302537.4112439/1‑94 (MQ=60)
AGTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGA < SRR4302537.2107494/94‑1 (MQ=60)
GTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGAC < SRR4302537.5665227/94‑1 (MQ=60)
GTTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGAC > SRR4302537.1679034/1‑94 (MQ=60)
TTATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACA < SRR4302537.5538192/94‑1 (MQ=60)
TATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAG < SRR4302537.4858989/94‑1 (MQ=60)
ATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGC > SRR4302537.4414701/1‑94 (MQ=60)
ATTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGC > SRR4302537.3249685/1‑94 (MQ=60)
TTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCC < SRR4302537.3175568/94‑1 (MQ=60)
TTTCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCC > SRR4302537.5018906/1‑94 (MQ=60)
TCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTG > SRR4302537.6003037/1‑94 (MQ=60)
TCGCGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTG < SRR4302537.2984211/94‑1 (MQ=60)
CGTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAG > SRR4302537.768739/1‑94 (MQ=60)
GTGGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGC < SRR4302537.5208462/94‑1 (MQ=60)
GGCGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGATACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGG > SRR4302537.3908979/1‑94 (MQ=60)
CGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGA < SRR4302537.5029535/94‑1 (MQ=60)
CGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGA > SRR4302537.2999493/1‑94 (MQ=60)
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GTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGA > NC_000913/2766678‑2766864
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
