Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,856,140 |
T→A |
L342Q (CTG→CAG) |
mutS → |
MutS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,856,140 | 0 | T | A | 100.0%
| 938.9
/ NA
| 258 | L342Q (CTG→CAG) | mutS | MutS |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (128/130); total (128/130) |
Only 100 of 260 total aligned reads displayed.
ATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTT > NC_000913/2856050‑2856229
|
atatGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGc > 1:303028/1‑93 (MQ=255)
tatGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCg > 2:3729612/1‑93 (MQ=255)
tatGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCg > 1:511642/1‑93 (MQ=255)
gCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCa < 1:4891491/93‑1 (MQ=255)
gCCAGGGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCa < 1:5480451/93‑1 (MQ=255)
cAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAgg > 1:6090920/1‑93 (MQ=255)
aGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGt < 2:5639411/93‑1 (MQ=255)
aGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGt < 1:5213315/93‑1 (MQ=255)
aGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGt > 1:3392530/1‑93 (MQ=255)
tGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCg < 2:6437829/93‑1 (MQ=255)
gcgcGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCgg < 1:1353788/93‑1 (MQ=255)
gATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAc > 2:4622691/1‑93 (MQ=255)
gATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAc > 1:4082377/1‑93 (MQ=255)
gtACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAcc < 2:920519/92‑1 (MQ=255)
aTACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAcc < 2:2221675/93‑1 (MQ=255)
aTACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAcc < 1:3074068/93‑1 (MQ=255)
tACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCt > 1:1244602/1‑93 (MQ=255)
tACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCt > 2:1295361/1‑93 (MQ=255)
tACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCt > 2:1919056/1‑93 (MQ=255)
gcccGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTg < 2:2669055/92‑1 (MQ=255)
cccGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTgg > 1:326121/1‑93 (MQ=255)
ccGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGa > 2:3263767/1‑93 (MQ=255)
ccGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGa < 2:4885439/93‑1 (MQ=255)
cgcgTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGaa > 1:2522136/1‑93 (MQ=255)
cgcgTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGaa < 1:4763220/93‑1 (MQ=255)
gcgTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAc > 1:2986140/1‑93 (MQ=255)
gcgTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAc > 1:3484593/1‑93 (MQ=255)
tgtTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGtt > 1:4796103/1‑92 (MQ=255)
tgtTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTa > 1:2463903/1‑93 (MQ=255)
tgtTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTa > 1:5456111/1‑93 (MQ=255)
ttGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTAtt < 2:203855/93‑1 (MQ=255)
cTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTg > 1:2384640/1‑93 (MQ=255)
ttGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTAAAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTgg < 1:3465687/93‑1 (MQ=255)
gAGGGCCAGCAAGCTATTGGCGCATTGCACGATTTCACGGCCGGGCTACAGCCGATACAGCGTAATGTGGACGACCTGGAACGTATTCTGGCa < 2:445149/93‑1 (MQ=255)
aGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCAc > 2:251885/1‑93 (MQ=255)
cgcCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGt < 1:400747/93‑1 (MQ=255)
ccAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCt < 2:2831841/93‑1 (MQ=255)
ccAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCt < 1:5313596/93‑1 (MQ=255)
cAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTg > 1:5000195/1‑93 (MQ=255)
cAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTg > 1:2066070/1‑93 (MQ=255)
cAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTg < 2:523038/93‑1 (MQ=255)
cAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTg > 1:1473722/1‑93 (MQ=255)
cAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTg < 1:1858813/93‑1 (MQ=255)
gCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGc > 1:3688568/1‑93 (MQ=255)
gCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGc < 1:650828/93‑1 (MQ=255)
aaaCTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCtt > 1:2185803/1‑93 (MQ=255)
aaaCTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCtt > 2:3386732/1‑93 (MQ=255)
aCTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTa < 2:5083691/93‑1 (MQ=255)
aCTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTa < 2:869786/93‑1 (MQ=255)
cTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTAc < 2:2913095/93‑1 (MQ=255)
cTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTAc < 2:1112625/93‑1 (MQ=255)
cTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTAc < 1:3815630/93‑1 (MQ=255)
tATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACg > 2:2129972/1‑93 (MQ=255)
tATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACg > 1:6327273/1‑93 (MQ=255)
aTTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGa > 1:1127069/1‑93 (MQ=255)
ttGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGaa > 2:728029/1‑93 (MQ=255)
tGGCGCATTGCAGGATGTCCCCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAAc < 2:5508367/93‑1 (MQ=255)
gcgcATTGCAGTATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTg < 2:4030380/93‑1 (MQ=255)
cgcATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGAATTCTGGCACGTCTGGCTTTACGAACTGc < 2:1472548/93‑1 (MQ=255)
gcATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCt > 2:5834423/1‑93 (MQ=255)
cATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTAGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTc < 1:2817437/93‑1 (MQ=255)
aTTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCg > 1:236170/1‑93 (MQ=255)
aTTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCg > 2:6075916/1‑93 (MQ=255)
aTTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCg > 1:1728654/1‑93 (MQ=255)
aTTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCg < 1:2146258/93‑1 (MQ=255)
ttGCAGTATTTCCCCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGc < 1:1573533/93‑1 (MQ=255)
ttGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGc > 2:79063/1‑93 (MQ=255)
ttGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGc > 1:1655406/1‑93 (MQ=255)
ttGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGc > 2:5885876/1‑93 (MQ=255)
tGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGcc > 1:465621/1‑93 (MQ=255)
cAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCa < 2:1557633/93‑1 (MQ=255)
aGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCAc > 2:4512045/1‑93 (MQ=255)
ggATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCAcg > 1:539072/1‑93 (MQ=255)
ggATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCAcg > 2:1673392/1‑93 (MQ=255)
gcaTTTCACCGCCGAGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCAcg < 2:3054827/91‑1 (MQ=255)
tttCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGa > 1:4276409/1‑93 (MQ=255)
tCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATc < 1:5577341/93‑1 (MQ=255)
tCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATc < 2:4250814/93‑1 (MQ=255)
cACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCt < 1:756985/93‑1 (MQ=255)
aCCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTg > 2:3537265/1‑93 (MQ=255)
aCCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTg > 1:2001127/1‑93 (MQ=255)
ccgccgGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTgg < 2:5172768/93‑1 (MQ=255)
cgccgGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGc > 2:1211494/1‑93 (MQ=255)
gccgGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGcc > 1:5045519/1‑93 (MQ=255)
gccgGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGcc < 1:3846942/93‑1 (MQ=255)
cgGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCg < 1:3102982/93‑1 (MQ=255)
ggCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTa < 1:3425284/93‑1 (MQ=255)
gCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTAt > 2:3124978/1‑93 (MQ=255)
tACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGNNCACGCGATCTGGCCNGNANgc > 1:2657489/1‑93 (MQ=255)
tACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATgc > 1:5649766/1‑93 (MQ=255)
aCAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATgcg > 1:1066990/1‑93 (MQ=255)
aCAGCCGGTACAGCGTCAGGTCGGAGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATgcg > 2:524064/1‑93 (MQ=255)
gCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCa > 2:3229898/1‑93 (MQ=255)
gCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCa < 1:1681577/93‑1 (MQ=255)
ccGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCAc < 1:6262404/93‑1 (MQ=255)
ccGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCAc > 1:5997304/1‑93 (MQ=255)
ggTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGc < 2:2426309/93‑1 (MQ=255)
gTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCt < 2:1302157/93‑1 (MQ=255)
tACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCtt > 2:4670890/1‑93 (MQ=255)
tACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCtt < 2:4135406/93‑1 (MQ=255)
|
ATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTT > NC_000913/2856050‑2856229
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCA > NC_000913/2856047‑2856233
|
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACA > SRR4302537.1910282/1‑94 (MQ=60)
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACA > SRR4302537.4390781/1‑94 (MQ=60)
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACA < SRR4302537.3810410/94‑1 (MQ=60)
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACA < SRR4302537.6208816/94‑1 (MQ=60)
TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACA > SRR4302537.1538595/1‑94 (MQ=60)
GCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAG > SRR4302537.4552974/1‑94 (MQ=60)
CATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGC > SRR4302537.6400309/1‑94 (MQ=60)
CATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGC > SRR4302537.255337/1‑94 (MQ=60)
CATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGC > SRR4302537.305137/1‑94 (MQ=60)
ATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCG > SRR4302537.5418425/1‑94 (MQ=60)
ATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCG > SRR4302537.515149/1‑94 (MQ=60)
ATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCG < SRR4302537.4727539/94‑1 (MQ=60)
ATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTC < SRR4302537.2517786/94‑1 (MQ=60)
ATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTC > SRR4302537.1350765/1‑94 (MQ=60)
ATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTC > SRR4302537.1630519/1‑94 (MQ=60)
GCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAG < SRR4302537.5702785/94‑1 (MQ=60)
GCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAG < SRR4302537.5607539/94‑1 (MQ=60)
GCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAG < SRR4302537.4925266/94‑1 (MQ=60)
GCCAGGGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAG < SRR4302537.5517866/94‑1 (MQ=60)
CCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGG > SRR4302537.6132768/1‑94 (MQ=60)
CCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGG < SRR4302537.6346808/94‑1 (MQ=60)
CCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGG > SRR4302537.4828527/1‑94 (MQ=60)
CAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGT > SRR4302537.3416559/1‑94 (MQ=60)
CAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGT < SRR4302537.946368/94‑1 (MQ=60)
AGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTC < SRR4302537.5249162/94‑1 (MQ=60)
GTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCG < SRR4302537.5508834/94‑1 (MQ=60)
GTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCG > SRR4302537.1482783/1‑94 (MQ=60)
GCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGC < SRR4302537.3622103/94‑1 (MQ=60)
GCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGC < SRR4302537.1363220/94‑1 (MQ=60)
CGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCG < SRR4302537.3032902/94‑1 (MQ=60)
CGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTGCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCG < SRR4302537.3214483/94‑1 (MQ=60)
GCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGA > SRR4302537.3858015/1‑94 (MQ=60)
GCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGA > SRR4302537.4082873/1‑94 (MQ=60)
CGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAC > SRR4302537.5246001/1‑94 (MQ=60)
CGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAC > SRR4302537.4895532/1‑94 (MQ=60)
CGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGAC > SRR4302537.4110877/1‑94 (MQ=60)
GATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACC > SRR4302537.1771831/1‑94 (MQ=60)
ATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCT > SRR4302537.1253274/1‑94 (MQ=60)
ATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCT < SRR4302537.3095488/94‑1 (MQ=60)
ACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGG > SRR4302537.328379/1‑94 (MQ=60)
CCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGA > SRR4302537.4126251/1‑94 (MQ=60)
CCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGA < SRR4302537.167796/94‑1 (MQ=60)
CCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAA > SRR4302537.2539840/1‑94 (MQ=60)
CGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAC < SRR4302537.4796117/94‑1 (MQ=60)
CGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAC > SRR4302537.3007004/1‑94 (MQ=60)
CGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAC > SRR4302537.3509242/1‑94 (MQ=60)
CGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAAC < SRR4302537.2831567/94‑1 (MQ=60)
GCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACG > SRR4302537.324199/1‑94 (MQ=60)
GTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTT > SRR4302537.4829202/1‑94 (MQ=60)
GTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTA > SRR4302537.5493328/1‑94 (MQ=60)
GTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTA > SRR4302537.2481226/1‑94 (MQ=60)
GTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGACGGTACAGCGTCAGGTCGGCGACCTGGAACGTA > SRR4302537.1740409/1‑94 (MQ=60)
TGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTAT > SRR4302537.2686931/1‑94 (MQ=60)
TGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTAT > SRR4302537.4363403/1‑94 (MQ=60)
GTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATT < SRR4302537.5421441/94‑1 (MQ=60)
TTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTC > SRR4302537.1236479/1‑94 (MQ=60)
TTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTC < SRR4302537.1672388/94‑1 (MQ=60)
TGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCT < SRR4302537.2157822/94‑1 (MQ=60)
TGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGAATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCT < SRR4302537.667598/94‑1 (MQ=60)
GCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTG > SRR4302537.2401439/1‑94 (MQ=60)
CTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGG < SRR4302537.1524079/94‑1 (MQ=60)
CTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGG > SRR4302537.2199698/1‑94 (MQ=60)
CTGGAGCGCCAGCAAATTATTGGCGAATTGCGGGATTCCA‑CGGCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGC < SRR4302537.3752324/94‑1 (MQ=60)
TTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTAAAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGC < SRR4302537.3490195/94‑1 (MQ=60)
TGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCA < SRR4302537.3754856/94‑1 (MQ=60)
AGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACG < SRR4302537.5218668/94‑1 (MQ=60)
GCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGT < SRR4302537.5793273/94‑1 (MQ=60)
CGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTC < SRR4302537.403525/94‑1 (MQ=60)
CCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTG < SRR4302537.5350090/94‑1 (MQ=60)
CCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTG > SRR4302537.2080581/1‑94 (MQ=60)
CCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTG > SRR4302537.1483965/1‑94 (MQ=60)
CCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTG > SRR4302537.5034644/1‑94 (MQ=60)
CAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGG > SRR4302537.5062947/1‑94 (MQ=60)
CAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGG < SRR4302537.1871760/94‑1 (MQ=60)
AGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGC > SRR4302537.3714508/1‑94 (MQ=60)
AGCAAACTATTGGCGCATCGCAGGATTCCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGC < SRR4302537.2838400/94‑1 (MQ=60)
GCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCT < SRR4302537.655262/94‑1 (MQ=60)
GCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCT > SRR4302537.5066252/1‑94 (MQ=60)
CAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTT > SRR4302537.3107342/1‑94 (MQ=60)
CAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTT > SRR4302537.2201202/1‑94 (MQ=60)
AAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTT > SRR4302537.6068931/1‑94 (MQ=60)
AACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTA < SRR4302537.1747474/94‑1 (MQ=60)
ACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTAC < SRR4302537.5081283/94‑1 (MQ=60)
ACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTAC < SRR4302537.2528330/94‑1 (MQ=60)
CTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACG > SRR4302537.6370547/1‑94 (MQ=60)
CTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACG < SRR4302537.3842388/94‑1 (MQ=60)
TATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGA > SRR4302537.1134887/1‑94 (MQ=60)
TATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGA < SRR4302537.1937945/94‑1 (MQ=60)
TATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGA < SRR4302537.482487/94‑1 (MQ=60)
TTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAAC < SRR4302537.5018099/94‑1 (MQ=60)
TGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACT < SRR4302537.889008/94‑1 (MQ=60)
TGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACT < SRR4302537.1207769/94‑1 (MQ=60)
GGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTG < SRR4302537.3985049/94‑1 (MQ=60)
GGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTG > SRR4302537.6355685/1‑94 (MQ=60)
GGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTG < SRR4302537.5470204/94‑1 (MQ=60)
CGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCT > SRR4302537.2287126/1‑94 (MQ=60)
CGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCT > SRR4302537.2916035/1‑94 (MQ=60)
GCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTC > SRR4302537.3145156/1‑94 (MQ=60)
CATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCG > SRR4302537.1740725/1‑94 (MQ=60)
CATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCG > SRR4302537.237836/1‑94 (MQ=60)
CATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTAGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCG < SRR4302537.2837137/94‑1 (MQ=60)
ATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGC < SRR4302537.2161359/94‑1 (MQ=60)
ATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGC > SRR4302537.1667006/1‑94 (MQ=60)
TTGCAGTATTTCCCCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCC < SRR4302537.1584511/94‑1 (MQ=60)
TTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCC > SRR4302537.468824/1‑94 (MQ=60)
TTGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCC > SRR4302537.3386831/1‑94 (MQ=60)
TGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCC > SRR4302537.69636/1‑94 (MQ=60)
TGCAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCC > SRR4302537.3091746/1‑94 (MQ=60)
CAGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCAC < SRR4302537.4494750/94‑1 (MQ=60)
AGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACG > SRR4302537.542775/1‑94 (MQ=60)
AGGATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACG > SRR4302537.5314926/1‑94 (MQ=60)
GATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCG < SRR4302537.240143/94‑1 (MQ=60)
GATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCG > SRR4302537.4230908/1‑94 (MQ=60)
ATTTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGA > SRR4302537.4306128/1‑94 (MQ=60)
TTCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATC > SRR4302537.5438455/1‑94 (MQ=60)
TCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCT < SRR4302537.342718/94‑1 (MQ=60)
TCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCT < SRR4302537.3942780/94‑1 (MQ=60)
TCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCT < SRR4302537.3468073/94‑1 (MQ=60)
TCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCT < SRR4302537.3665890/94‑1 (MQ=60)
TCACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCT < SRR4302537.5615462/94‑1 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG < SRR4302537.762153/94‑1 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG < SRR4302537.3316921/94‑1 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG > SRR4302537.2015042/1‑94 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG < SRR4302537.5663465/94‑1 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG < SRR4302537.3077387/94‑1 (MQ=60)
CACCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTG > SRR4302537.5545/1‑94 (MQ=60)
CCGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGC < SRR4302537.1469804/94‑1 (MQ=60)
CGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCC > SRR4302537.2117592/1‑94 (MQ=60)
CGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCC < SRR4302537.1944703/94‑1 (MQ=60)
CGCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCC > SRR4302537.5080265/1‑94 (MQ=60)
GCCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCC < SRR4302537.3873872/94‑1 (MQ=60)
GCCGGGCTACAGCCAGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCC < SRR4302537.1113259/94‑1 (MQ=60)
CCGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCG < SRR4302537.4971171/94‑1 (MQ=60)
CGGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGT < SRR4302537.3124650/94‑1 (MQ=60)
GGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTA > SRR4302537.2048145/1‑94 (MQ=60)
GGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTA > SRR4302537.350855/1‑94 (MQ=60)
GGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTA > SRR4302537.347837/1‑94 (MQ=60)
GGGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTA < SRR4302537.1500639/94‑1 (MQ=60)
GGCTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTAT < SRR4302537.3449529/94‑1 (MQ=60)
CTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGNNCACGCGATCTGGCCNGNANGC > SRR4302537.2676062/1‑94 (MQ=60)
CTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGC > SRR4302537.5688433/1‑94 (MQ=60)
CTACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGC < SRR4302537.6043022/94‑1 (MQ=60)
TACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCG > SRR4302537.2244145/1‑94 (MQ=60)
TACAGCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCG > SRR4302537.1074340/1‑94 (MQ=60)
GCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCAC > SRR4302537.6038502/1‑94 (MQ=60)
GCCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCAC < SRR4302537.1693345/94‑1 (MQ=60)
CCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACG < SRR4302537.6305394/94‑1 (MQ=60)
CCGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACG > SRR4302537.2389455/1‑94 (MQ=60)
CGGTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGC < SRR4302537.6159819/94‑1 (MQ=60)
GTACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTT > SRR4302537.2457417/1‑94 (MQ=60)
ACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTC > SRR4302537.3133681/1‑94 (MQ=60)
ACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTC < SRR4302537.5744539/94‑1 (MQ=60)
ACAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTC < SRR4302537.2333891/94‑1 (MQ=60)
CAGCGTCAGGTCGGCGACCTGTAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCC < SRR4302537.2937477/94‑1 (MQ=60)
CAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCC < SRR4302537.64120/94‑1 (MQ=60)
CAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCC < SRR4302537.2759488/94‑1 (MQ=60)
CAGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCC < SRR4302537.4849161/94‑1 (MQ=60)
AGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCA > SRR4302537.741666/1‑94 (MQ=60)
AGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCA < SRR4302537.3286879/94‑1 (MQ=60)
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TGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCA > NC_000913/2856047‑2856233
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
