Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,902,184 |
A→G |
intergenic (+788/+585) |
ygcE → / ← ygcF |
putative kinase/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,902,184 | 0 | A | G | 94.0%
| 643.9
/ 24.8
| 216 | intergenic (+788/+585) | ygcE/ygcF | putative kinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (9/4); new base G (100/103); total (109/107) |
| Fisher's exact test for biased strand distribution p-value = 2.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 |
Only 100 of 224 total aligned reads displayed.
GCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCAC > NC_000913/2902092‑2902276
|
gCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAaca > 1:3626606/1‑93 (MQ=255)
tCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAAcgcg > 1:5113609/1‑93 (MQ=255)
cGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCggg > 1:4330182/1‑93 (MQ=255)
cGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCggg < 1:5015389/93‑1 (MQ=255)
ggTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGgc < 2:1954114/93‑1 (MQ=255)
gTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGgcg > 2:5760342/1‑93 (MQ=255)
ttATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCa < 1:3202741/93‑1 (MQ=255)
tCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACgg < 2:3090789/93‑1 (MQ=255)
cccGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGaa > 1:3983282/1‑93 (MQ=255)
ccGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAAt > 1:5041081/1‑93 (MQ=255)
ccGCTGGCGCGGAGAACTCCTTTTTTCGCAATTCTATGGATTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAAt < 2:6169127/93‑1 (MQ=37)
gCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATAc < 2:261087/93‑1 (MQ=255)
gCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATAc > 1:4268183/1‑93 (MQ=255)
cTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACa < 1:240341/93‑1 (MQ=255)
cgcgGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGc < 1:1181934/93‑1 (MQ=255)
cgcgGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGc < 1:1361173/93‑1 (MQ=255)
gcgGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGcc < 1:341761/93‑1 (MQ=255)
cgGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCg > 2:3918749/1‑93 (MQ=255)
ggggAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCgt > 1:3478297/1‑93 (MQ=255)
gggAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCgtg < 1:74957/93‑1 (MQ=255)
gggAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCgtg > 1:2976108/1‑93 (MQ=255)
gggAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCgtg > 2:3606752/1‑93 (MQ=255)
ggAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCgtgt > 2:1314406/1‑93 (MQ=255)
gAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTa > 2:1030535/1‑93 (MQ=255)
gAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTa > 2:4024299/1‑93 (MQ=255)
acacCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATc < 2:1758545/93‑1 (MQ=255)
acCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTg > 1:4818967/1‑93 (MQ=255)
acCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTg > 2:3015535/1‑93 (MQ=255)
ccTGTTTTCTCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc < 2:3858115/93‑1 (MQ=255)
ccTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc < 2:936372/93‑1 (MQ=255)
ccTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc > 1:4942415/1‑93 (MQ=255)
ccTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc > 2:5266698/1‑93 (MQ=255)
ccTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc < 2:4861019/93‑1 (MQ=255)
ccTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGc > 1:6030705/1‑93 (MQ=255)
cTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCt > 1:3071245/1‑93 (MQ=255)
tGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTc > 1:1049535/1‑93 (MQ=255)
tGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTc > 1:1597275/1‑93 (MQ=255)
tGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTc > 1:2479867/1‑93 (MQ=255)
gTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCg < 2:2095156/93‑1 (MQ=255)
gTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCg > 2:2975810/1‑93 (MQ=255)
ttttCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCGCGGAATACAAAGCCGTGTATCTGCTCgg > 1:4167725/1‑93 (MQ=255)
tttCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGt > 2:699064/1‑93 (MQ=255)
ttCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGtt < 2:2518952/93‑1 (MQ=255)
ttCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGtt < 1:327121/93‑1 (MQ=255)
gCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTAt < 1:25716/93‑1 (MQ=255)
gCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTAt > 1:3040380/1‑93 (MQ=255)
cAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATc < 1:5541123/93‑1 (MQ=255)
cAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATc > 1:1961242/1‑93 (MQ=255)
aaaTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcc < 2:3498226/93‑1 (MQ=255)
aaaTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcc < 2:5545114/93‑1 (MQ=255)
aTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcccc > 2:3269564/1‑93 (MQ=255)
aTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcccc < 2:279574/93‑1 (MQ=255)
aTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcccc > 1:541346/1‑93 (MQ=255)
aTCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATcccc < 1:1905556/93‑1 (MQ=255)
tCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCg > 2:2917987/1‑93 (MQ=255)
tCTATGGACTATTGCTATTCGG‑TTATTCCCGCCGGCGCGGGGAACGCGGGCGCACGGAATACAAAACCGTGTATCTGCTCGGTTTATTCCCGc > 2:1132331/1‑93 (MQ=255)
cTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGc > 1:4480424/1‑93 (MQ=255)
tATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCt > 2:1791792/1‑93 (MQ=255)
tATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCt < 2:4201222/93‑1 (MQ=255)
tGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTgg > 2:2069327/1‑93 (MQ=255)
ggACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGgc > 2:4362787/1‑93 (MQ=255)
ggACTATTGCTATTCGGTTTATACCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGgc > 2:269351/1‑93 (MQ=255)
tATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCgg < 2:5447693/93‑1 (MQ=255)
aTTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCggg > 1:4599383/1‑93 (MQ=255)
aTTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCggg > 1:2137252/1‑93 (MQ=255)
ttGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCgggg > 1:3890523/1‑93 (MQ=255)
ttGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCgggg > 2:6044477/1‑93 (MQ=255)
ttGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCgggg > 2:3122537/1‑93 (MQ=255)
tGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGa > 2:4372881/1‑93 (MQ=255)
gCTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGaa > 2:6413874/1‑93 (MQ=255)
cTATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAac < 2:5423812/93‑1 (MQ=255)
tATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGGaca > 2:4623776/1‑93 (MQ=255)
tATTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAaca < 1:907738/93‑1 (MQ=255)
aTTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAacac < 1:1680452/93‑1 (MQ=255)
aTTCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAacac > 1:2912209/1‑93 (MQ=255)
tCGGTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTg < 1:2223151/93‑1 (MQ=255)
ggTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGc > 1:3549278/1‑93 (MQ=255)
ggTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGc < 1:1536632/93‑1 (MQ=255)
ggTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGc < 2:4052842/93‑1 (MQ=255)
gTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGct > 1:1009028/1‑93 (MQ=255)
gTTTATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGct < 1:6273666/93‑1 (MQ=255)
tttATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGctc > 1:476612/1‑93 (MQ=255)
tttATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGctc < 2:5313780/93‑1 (MQ=255)
tttATCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGctc < 1:6180890/93‑1 (MQ=255)
ccccGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCaa > 2:2168857/1‑93 (MQ=255)
ccccGCTGGCGCGGGGAACGCGAGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCaa < 2:4767337/93‑1 (MQ=255)
cccGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAAc > 1:5839453/1‑93 (MQ=255)
cGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAAcag < 2:5957760/93‑1 (MQ=255)
gCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAAcagc < 1:1811192/93‑1 (MQ=255)
cTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAAcagca > 1:4436297/1‑93 (MQ=255)
ggCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACagcagc < 2:411044/93‑1 (MQ=255)
gcgcGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAgcagca > 1:2806605/1‑93 (MQ=255)
cgcgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAc < 2:2298972/93‑1 (MQ=255)
gcgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAcc < 1:4214777/93‑1 (MQ=255)
gcgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAcc > 1:1410051/1‑93 (MQ=255)
cgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAccc < 2:5590853/93‑1 (MQ=255)
cgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAccc < 1:3209285/93‑1 (MQ=255)
cgGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCAccc < 2:609782/93‑1 (MQ=255)
ggggAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCa > 1:612481/1‑93 (MQ=255)
gAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGa < 2:1516563/93‑1 (MQ=255)
|
GCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCAC > NC_000913/2902092‑2902276
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCA > NC_000913/2902091‑2902275
|
GGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACG < SRR4302537.2581647/94‑1 (MQ=60)
GGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACA > SRR4302537.3652171/1‑94 (MQ=60)
GGCTCCGGTTTATCCCCGCTGGCGCGGGAAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACG < SRR4302537.4206629/94‑1 (MQ=60)
GCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGC > SRR4302537.6263212/1‑94 (MQ=60)
GCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGC < SRR4302537.3899021/94‑1 (MQ=60)
CTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCG > SRR4302537.5148854/1‑94 (MQ=60)
CTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCG < SRR4302537.169137/94‑1 (MQ=60)
CTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCG < SRR4302537.159946/94‑1 (MQ=60)
CCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGG > SRR4302537.4360268/1‑94 (MQ=60)
CCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGG < SRR4302537.2123938/94‑1 (MQ=60)
CGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGC < SRR4302537.5049931/94‑1 (MQ=60)
GGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCG > SRR4302537.2253559/1‑94 (MQ=60)
TTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCAC < SRR4302537.3225257/94‑1 (MQ=60)
TTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCAC < SRR4302537.1597018/94‑1 (MQ=60)
TATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACG < SRR4302537.848683/94‑1 (MQ=60)
ATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGG > SRR4302537.4285133/1‑94 (MQ=60)
TCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGA < SRR4302537.1657801/94‑1 (MQ=60)
CCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAA > SRR4302537.1790309/1‑94 (MQ=60)
CCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAA > SRR4302537.4011169/1‑94 (MQ=60)
CCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAAT > SRR4302537.5075788/1‑94 (MQ=60)
CCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATA < SRR4302537.4225083/94‑1 (MQ=60)
CGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATAC > SRR4302537.4297838/1‑94 (MQ=60)
CTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGTTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAA < SRR4302537.3483241/94‑1 (MQ=60)
CTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAA < SRR4302537.242043/94‑1 (MQ=60)
TGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAA < SRR4302537.6193852/94‑1 (MQ=60)
TGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAA > SRR4302537.2651537/1‑94 (MQ=60)
TGGCGCGGGGAACACCTG‑TTTCGCAAATCTATGGGATAATGCTATTCCGTTTATTCCCCGC‑GGCGCGGGGGAACCGGGCGCCCGGAATACAAAG > SRR4302537.2681917/1‑94 (MQ=19)
CGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCC < SRR4302537.1370656/94‑1 (MQ=60)
CGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCC < SRR4302537.3206884/94‑1 (MQ=60)
CGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCC < SRR4302537.1190156/94‑1 (MQ=60)
GCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCG < SRR4302537.594581/94‑1 (MQ=60)
GCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCG < SRR4302537.2989135/94‑1 (MQ=60)
GCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCG > SRR4302537.5140587/1‑94 (MQ=60)
GCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCG < SRR4302537.344132/94‑1 (MQ=60)
CGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGT < SRR4302537.2208144/94‑1 (MQ=60)
CGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGT > SRR4302537.3502910/1‑94 (MQ=60)
GGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTG > SRR4302537.2996940/1‑94 (MQ=60)
GGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGT < SRR4302537.75508/94‑1 (MQ=60)
GGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTA < SRR4302537.4507713/94‑1 (MQ=60)
GGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTA > SRR4302537.6361766/1‑94 (MQ=60)
ACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCcaacggaatcaaaagcgtggtatct > SRR4302537.2539040/1‑69 (MQ=60)
ACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCT < SRR4302537.3281890/94‑1 (MQ=60)
ACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCT < SRR4302537.1437276/94‑1 (MQ=60)
CACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTG > SRR4302537.5054014/1‑94 (MQ=60)
CACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTG > SRR4302537.4852240/1‑94 (MQ=60)
CACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTG > SRR4302537.5806482/1‑94 (MQ=60)
ACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGC > SRR4302537.6072140/1‑94 (MQ=60)
ACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGC > SRR4302537.4976498/1‑94 (MQ=60)
CCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCT > SRR4302537.3000832/1‑94 (MQ=60)
CCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCT > SRR4302537.3092642/1‑94 (MQ=60)
CTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTC > SRR4302537.1040619/1‑94 (MQ=60)
CTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTC > SRR4302537.1608433/1‑94 (MQ=60)
CTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTC > SRR4302537.1056770/1‑94 (MQ=60)
CTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTC > SRR4302537.2497299/1‑94 (MQ=60)
GTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCGCGGAATACAAAGCCGTGTATCTGCTCGG > SRR4302537.4196835/1‑94 (MQ=60)
TTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTT < SRR4302537.4883073/94‑1 (MQ=60)
TTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTT < SRR4302537.1921999/94‑1 (MQ=60)
TTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTT < SRR4302537.329392/94‑1 (MQ=60)
TTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTT < SRR4302537.3623855/94‑1 (MQ=60)
CGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTAT > SRR4302537.4816938/1‑94 (MQ=60)
CGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTAT > SRR4302537.3061568/1‑94 (MQ=60)
GCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATC > SRR4302537.1974881/1‑94 (MQ=60)
GCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATC < SRR4302537.25919/94‑1 (MQ=60)
CAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCC < SRR4302537.5578958/94‑1 (MQ=60)
AAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCC > SRR4302537.3377391/1‑94 (MQ=60)
AAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCC > SRR4302537.4317233/1‑94 (MQ=60)
AATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCC > SRR4302537.545077/1‑94 (MQ=60)
AATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCC > SRR4302537.5479876/1‑94 (MQ=60)
AATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCC < SRR4302537.3963511/94‑1 (MQ=60)
ATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCG < SRR4302537.1918792/94‑1 (MQ=60)
ATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCG > SRR4302537.4834903/1‑94 (MQ=60)
TCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGC < SRR4302537.4659865/94‑1 (MQ=60)
TCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGC > SRR4302537.4511420/1‑94 (MQ=60)
CTATGTACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCT < SRR4302537.3226857/94‑1 (MQ=60)
TATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTG < SRR4302537.1164893/94‑1 (MQ=60)
TGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGC < SRR4302537.6116918/94‑1 (MQ=60)
GGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCAGACGCACGGAATACAAAGCAGCGTATCTGCTCGGTTTATCCCCGCTGGCG > SRR4302537.3494447/1‑94 (MQ=60)
TATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGG > SRR4302537.2152299/1‑94 (MQ=60)
TATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGG > SRR4302537.4631216/1‑94 (MQ=60)
ATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGG > SRR4302537.4040021/1‑94 (MQ=60)
ATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGG < SRR4302537.1345866/94‑1 (MQ=60)
ATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGG > SRR4302537.3917730/1‑94 (MQ=60)
TGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAA > SRR4302537.5106726/1‑94 (MQ=60)
GCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAAC > SRR4302537.1857904/1‑94 (MQ=60)
CTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACA < SRR4302537.627659/94‑1 (MQ=60)
TATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC < SRR4302537.914009/94‑1 (MQ=60)
TATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC < SRR4302537.417991/94‑1 (MQ=60)
TATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC > SRR4302537.2893275/1‑94 (MQ=60)
TATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC > SRR4302537.2932666/1‑94 (MQ=60)
ATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACT < SRR4302537.1692214/94‑1 (MQ=60)
ATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACT < SRR4302537.5329509/94‑1 (MQ=60)
TTCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTG < SRR4302537.440607/94‑1 (MQ=60)
TCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGG < SRR4302537.4600271/94‑1 (MQ=60)
TCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGG < SRR4302537.2238812/94‑1 (MQ=60)
TCGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGG < SRR4302537.4378937/94‑1 (MQ=60)
CGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGC > SRR4302537.3574347/1‑94 (MQ=60)
CGGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGC > SRR4302537.3520267/1‑94 (MQ=60)
GGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCT > SRR4302537.1015986/1‑94 (MQ=60)
GGTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCT < SRR4302537.1547363/94‑1 (MQ=60)
GTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTC < SRR4302537.6316714/94‑1 (MQ=60)
GTTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTC > SRR4302537.479868/1‑94 (MQ=60)
TTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCT < SRR4302537.6223465/94‑1 (MQ=60)
TTTA‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCT > SRR4302537.6067323/1‑94 (MQ=60)
A‑TCCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCA < SRR4302537.3827719/94‑1 (MQ=60)
CCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAAC > SRR4302537.5879476/1‑94 (MQ=60)
CCCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGCTTATCCCCGCTGGCGCGGGGCACACTTGCTCTGCAAC > SRR4302537.5005045/1‑94 (MQ=60)
CCCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACA > SRR4302537.656641/1‑94 (MQ=60)
CCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAG > SRR4302537.1394762/1‑94 (MQ=60)
CCGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAG > SRR4302537.1830003/1‑94 (MQ=60)
CGCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGC > SRR4302537.2920599/1‑94 (MQ=60)
GCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCA > SRR4302537.4466927/1‑94 (MQ=60)
GCTGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCA < SRR4302537.1823818/94‑1 (MQ=60)
TGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGC < SRR4302537.2450860/94‑1 (MQ=60)
TGGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGCCGCGGGGAACACTGCCTCTGCAAAAGAAGC > SRR4302537.827575/1‑94 (MQ=60)
GGCGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCA > SRR4302537.2826224/1‑94 (MQ=60)
CGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACC < SRR4302537.3160130/94‑1 (MQ=60)
CGCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACC > SRR4302537.1419872/1‑94 (MQ=60)
GCGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCC < SRR4302537.4244164/94‑1 (MQ=60)
CGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCA > SRR4302537.616660/1‑94 (MQ=60)
CGGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCA < SRR4302537.3231847/94‑1 (MQ=60)
GGGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCAT < SRR4302537.2383893/94‑1 (MQ=60)
GGGAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATG < SRR4302537.1466906/94‑1 (MQ=60)
GAACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGAC < SRR4302537.308640/94‑1 (MQ=60)
ACGCGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCA < SRR4302537.22172/94‑1 (MQ=60)
|
GGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTA‑TCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCA > NC_000913/2902091‑2902275
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
