Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,959,806 |
A→G |
G215G (GGT→GGC) |
recC ← |
RecC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,959,806 | 0 | A | G | 100.0%
| 738.3
/ NA
| 213 | G215G (GGT→GGC) | recC | RecC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (91/122); total (91/122) |
Only 100 of 216 total aligned reads displayed.
ACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCG > NC_000913/2959716‑2959895
|
aCGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGcc < 2:1636942/93‑1 (MQ=255)
cGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCg < 2:1576227/93‑1 (MQ=255)
ggCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGc > 2:3209148/1‑93 (MQ=255)
gCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTCGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCa < 2:5264662/93‑1 (MQ=255)
gCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCa < 1:4121815/93‑1 (MQ=255)
cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCat < 1:6377571/93‑1 (MQ=255)
ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCatat < 2:4801354/93‑1 (MQ=255)
ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCatat < 2:2096493/93‑1 (MQ=255)
ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCatat > 1:4491761/1‑93 (MQ=255)
gggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCAtata < 1:3041133/93‑1 (MQ=255)
ggTTGGTAAACAGAAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATaa < 1:2534236/93‑1 (MQ=255)
gTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATaaa > 1:4925835/1‑93 (MQ=255)
gTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATaaa < 2:4214337/93‑1 (MQ=255)
ttGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAg > 2:720593/1‑93 (MQ=255)
tgatAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGa < 1:6082650/90‑1 (MQ=255)
gTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcg > 1:3128957/1‑93 (MQ=255)
gTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcg < 2:5018084/93‑1 (MQ=255)
tAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgc < 1:6345492/93‑1 (MQ=255)
tAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgc < 2:1250581/93‑1 (MQ=255)
tAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgc < 2:5380555/93‑1 (MQ=255)
aaaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcg > 1:1329097/1‑93 (MQ=255)
aaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgc < 1:2430368/93‑1 (MQ=255)
aCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgcg > 1:5586384/1‑93 (MQ=255)
aCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgcg > 1:2700253/1‑93 (MQ=255)
cAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGa > 2:1475979/1‑93 (MQ=255)
aGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGaa < 2:5605842/93‑1 (MQ=255)
aGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGaa < 2:2333629/93‑1 (MQ=255)
aGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGaa > 1:2494038/1‑93 (MQ=255)
aGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGaa < 2:3629068/93‑1 (MQ=255)
ggAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAg > 2:3543715/1‑93 (MQ=255)
ggAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAg < 2:4338072/93‑1 (MQ=255)
gagaTGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAgg < 1:2251943/93‑1 (MQ=255)
agaTGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGt < 2:3583982/93‑1 (MQ=255)
ggtGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTa < 1:4523395/91‑1 (MQ=255)
tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGGCGGTAAc > 1:1186953/1‑93 (MQ=255)
tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAc < 1:3886518/93‑1 (MQ=255)
tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAc > 2:6233506/1‑93 (MQ=255)
tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAc < 1:1501327/93‑1 (MQ=255)
ggATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAcc < 1:3306302/93‑1 (MQ=255)
ggATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAcc > 2:4395579/1‑93 (MQ=255)
aTTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAcccc < 2:2550971/93‑1 (MQ=255)
ttCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcgg > 2:516441/1‑93 (MQ=255)
cAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggcg > 1:4721625/1‑93 (MQ=255)
cAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggcg < 1:5489451/93‑1 (MQ=255)
cAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGAGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggcg < 1:3805317/93‑1 (MQ=255)
aaTATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggcgg < 2:4173541/93‑1 (MQ=255)
aaTATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggcgg < 2:6076772/93‑1 (MQ=255)
tatGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGc > 2:1898220/1‑93 (MQ=255)
tatGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGc > 2:2800884/1‑93 (MQ=255)
tatGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGc > 1:4374617/1‑93 (MQ=255)
atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCa > 1:3602662/1‑93 (MQ=255)
gTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAgg > 1:1142575/1‑93 (MQ=255)
gTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAgg < 1:4558694/93‑1 (MQ=255)
tttACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgt < 2:3170616/93‑1 (MQ=255)
tACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgtcg < 2:6226810/93‑1 (MQ=255)
cccAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgtcgtc < 2:5416908/93‑1 (MQ=255)
cAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTcgc < 1:1578860/93‑1 (MQ=255)
gcgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCgg > 1:3865452/1‑93 (MQ=255)
gcgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCgg < 2:2606618/93‑1 (MQ=255)
gcgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCgg > 1:5822939/1‑93 (MQ=255)
cgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGa < 1:1060629/93‑1 (MQ=255)
cgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGa < 2:1972459/93‑1 (MQ=255)
gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAc < 1:1452030/93‑1 (MQ=255)
gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAc < 1:893870/93‑1 (MQ=255)
gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAc > 2:5674521/1‑93 (MQ=255)
gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAc > 1:3449711/1‑93 (MQ=255)
ccTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACt > 2:4197114/1‑93 (MQ=255)
tGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTcc < 2:1722543/93‑1 (MQ=255)
tGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTcc < 2:1294495/93‑1 (MQ=255)
gTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCa < 2:2276703/93‑1 (MQ=255)
tAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAg < 1:3677384/93‑1 (MQ=255)
aGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATTCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGc < 1:3334906/93‑1 (MQ=255)
aGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGc < 1:1790241/93‑1 (MQ=255)
gcCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGtt < 2:4590106/93‑1 (MQ=255)
cTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTc > 1:4217567/1‑93 (MQ=255)
tGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCg < 1:4610285/93‑1 (MQ=255)
gaTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaa < 1:2936509/93‑1 (MQ=255)
gaTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaa > 2:5911908/1‑93 (MQ=255)
aTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaaa > 2:4525773/1‑93 (MQ=255)
aaaCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAgc < 2:5697313/93‑1 (MQ=255)
aaCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAgcg > 1:685921/1‑93 (MQ=255)
aaCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAgcg > 2:1183513/1‑93 (MQ=255)
aaCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAgcg > 2:1962781/1‑93 (MQ=255)
aCAGGCGGTAACGCGGAAATGCAACATATAAGGACGCGCGAAGGTAACACCGGCGGGCAGGTCGTCGAGGCCACCAGCGTTTCGATAAAgcgc < 2:6475479/93‑1 (MQ=255)
cAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGAGCt > 1:202233/1‑93 (MQ=255)
aGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTg > 1:880643/1‑93 (MQ=255)
aGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTg < 2:6390241/93‑1 (MQ=255)
ggCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGa < 2:57781/93‑1 (MQ=255)
gggTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATa < 1:5111622/92‑1 (MQ=255)
gTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATaga < 1:4300395/93‑1 (MQ=255)
tAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATagag < 2:3789061/93‑1 (MQ=255)
tAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATagag < 1:4663873/93‑1 (MQ=255)
aCGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGAt < 2:2838622/93‑1 (MQ=255)
aCGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGAt < 1:4877202/93‑1 (MQ=255)
cgcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGAtt < 2:1217109/93‑1 (MQ=255)
cgcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGAtt < 2:4081969/93‑1 (MQ=255)
gcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTg < 1:5880477/93‑1 (MQ=255)
ggAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGgc < 2:4855582/93‑1 (MQ=255)
gAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGgcg > 2:3697210/1‑93 (MQ=255)
aaTGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGcgcg > 1:6034197/1‑93 (MQ=255)
|
ACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCG > NC_000913/2959716‑2959895
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGGTGC > NC_000913/2959713‑2959899
|
ATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATG > SRR4302537.4257235/1‑94 (MQ=60)
ATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATG > SRR4302537.4035419/1‑94 (MQ=60)
AACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCC > SRR4302537.3754646/1‑94 (MQ=60)
AACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCC < SRR4302537.4986521/94‑1 (MQ=60)
ACGGCAGGGCTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCG < SRR4302537.3403116/94‑1 (MQ=60)
GCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCAT < SRR4302537.4609652/94‑1 (MQ=60)
GCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCAT < SRR4302537.4150589/94‑1 (MQ=60)
CAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATA > SRR4302537.1996655/1‑94 (MQ=60)
CAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATA < SRR4302537.6421055/94‑1 (MQ=60)
AGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATAT > SRR4302537.4522834/1‑94 (MQ=60)
AGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATAT > SRR4302537.5818229/1‑94 (MQ=60)
AGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATAT < SRR4302537.1223557/94‑1 (MQ=60)
GGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAA < SRR4302537.491786/94‑1 (MQ=60)
GGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAA < SRR4302537.3062324/94‑1 (MQ=60)
GGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAA > SRR4302537.4959793/1‑94 (MQ=60)
GGTTGGTAAACAGAAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAA < SRR4302537.2552021/94‑1 (MQ=60)
GTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGTAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAG > SRR4302537.4168306/1‑94 (MQ=60)
GTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAG < SRR4302537.366426/94‑1 (MQ=60)
GTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAG < SRR4302537.3293503/94‑1 (MQ=60)
GTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAA > SRR4302537.4336442/1‑94 (MQ=60)
TTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGA < SRR4302537.6096576/94‑1 (MQ=60)
TTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGA < SRR4302537.1159137/94‑1 (MQ=60)
TGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAC < SRR4302537.2522013/94‑1 (MQ=60)
TGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAC < SRR4302537.149101/94‑1 (MQ=60)
TGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAC > SRR4302537.3331316/1‑94 (MQ=60)
TGATAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAC < SRR4302537.6124444/94‑1 (MQ=60)
GGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACG < SRR4302537.3462286/94‑1 (MQ=60)
GGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACG > SRR4302537.3150889/1‑94 (MQ=60)
TAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCG < SRR4302537.6388833/94‑1 (MQ=60)
TAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCG > SRR4302537.1338363/1‑94 (MQ=60)
AACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCG < SRR4302537.2447492/94‑1 (MQ=60)
AACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCG > SRR4302537.5624576/1‑94 (MQ=60)
AACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCG > SRR4302537.2719114/1‑94 (MQ=60)
ACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGA > SRR4302537.2243063/1‑94 (MQ=60)
CAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAA > SRR4302537.2511598/1‑94 (MQ=60)
AGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAG > SRR4302537.890304/1‑94 (MQ=60)
GAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGT < SRR4302537.2842315/94‑1 (MQ=60)
GAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGT < SRR4302537.2267840/94‑1 (MQ=60)
GAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGT < SRR4302537.3843509/94‑1 (MQ=60)
GGTGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAA < SRR4302537.4554691/94‑1 (MQ=60)
ATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGGCGGTAAC > SRR4302537.1195197/1‑94 (MQ=60)
ATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAC < SRR4302537.5900660/94‑1 (MQ=60)
TGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACC < SRR4302537.1511807/94‑1 (MQ=60)
TGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACC < SRR4302537.3913704/94‑1 (MQ=60)
GGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCC < SRR4302537.3329677/94‑1 (MQ=60)
ATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCG < SRR4302537.5520207/94‑1 (MQ=60)
ATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCG > SRR4302537.269093/1‑94 (MQ=60)
TTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGG < SRR4302537.308350/94‑1 (MQ=60)
TCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCG > SRR4302537.4754266/1‑94 (MQ=60)
CAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGG < SRR4302537.5526925/94‑1 (MQ=60)
CAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGAGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGG < SRR4302537.3832000/94‑1 (MQ=60)
ATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGC > SRR4302537.4404833/1‑94 (MQ=60)
TATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCA > SRR4302537.3628052/1‑94 (MQ=60)
TGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGG > SRR4302537.1150517/1‑94 (MQ=60)
GTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGT < SRR4302537.4590249/94‑1 (MQ=60)
GTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGGAAACCCGGCGGGCAGGT > SRR4302537.2289592/1‑94 (MQ=60)
TTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTC < SRR4302537.1802407/94‑1 (MQ=60)
TTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGAGAAGGTAACCCCGGCGGGCAGGTC > SRR4302537.6047577/1‑94 (MQ=60)
TTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCG > SRR4302537.2612946/1‑94 (MQ=60)
TACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGT > SRR4302537.4048818/1‑94 (MQ=60)
ACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTC < SRR4302537.1098690/94‑1 (MQ=60)
CCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCG > SRR4302537.429875/1‑94 (MQ=60)
CCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGG > SRR4302537.5142885/1‑94 (MQ=60)
CAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCG < SRR4302537.1589893/94‑1 (MQ=60)
AGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGG > SRR4302537.5862844/1‑94 (MQ=60)
AGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGG > SRR4302537.3892506/1‑94 (MQ=60)
CGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAC < SRR4302537.1067945/94‑1 (MQ=60)
CGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAC > SRR4302537.3474111/1‑94 (MQ=60)
GCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACT < SRR4302537.900038/94‑1 (MQ=60)
GCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACT < SRR4302537.1462148/94‑1 (MQ=60)
CCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTC > SRR4302537.6303555/1‑94 (MQ=60)
CTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAGGACGCGCGAAGGAAACCCCGGCGGGCAGGTCGTCGCGGcttcc > SRR4302537.5570301/1‑89 (MQ=60)
CTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCC < SRR4302537.6209268/94‑1 (MQ=60)
TGTAGCGCCTGGAGATAAACAGGCGGTAACGCGTAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCA < SRR4302537.3990342/94‑1 (MQ=60)
GTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAG < SRR4302537.5595656/94‑1 (MQ=60)
TAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGC < SRR4302537.3703254/94‑1 (MQ=60)
AGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATTCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCG < SRR4302537.3358505/94‑1 (MQ=60)
AGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCG < SRR4302537.1802743/94‑1 (MQ=60)
CGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTT < SRR4302537.1643029/94‑1 (MQ=60)
GCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTT < SRR4302537.3539796/94‑1 (MQ=60)
CCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTC > SRR4302537.4246966/1‑94 (MQ=60)
CTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCG < SRR4302537.4776713/94‑1 (MQ=60)
TGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGA < SRR4302537.4642206/94‑1 (MQ=60)
GGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGAT > SRR4302537.458424/1‑94 (MQ=60)
GGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGAT > SRR4302537.4472567/1‑94 (MQ=60)
GAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATA > SRR4302537.6450446/1‑94 (MQ=60)
GATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAA < SRR4302537.2957130/94‑1 (MQ=60)
ATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAG > SRR4302537.6399513/1‑94 (MQ=60)
AAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCG > SRR4302537.690625/1‑94 (MQ=60)
AAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCG > SRR4302537.2998113/1‑94 (MQ=60)
AAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCG < SRR4302537.466385/94‑1 (MQ=60)
ACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGAGCT > SRR4302537.203678/1‑94 (MQ=60)
CAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTG > SRR4302537.886703/1‑94 (MQ=60)
GGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGAT < SRR4302537.4715045/94‑1 (MQ=60)
GGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGAT < SRR4302537.2501515/94‑1 (MQ=60)
GGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAG < SRR4302537.5146854/94‑1 (MQ=60)
GTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAG < SRR4302537.4330282/94‑1 (MQ=60)
TAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGA < SRR4302537.4696106/94‑1 (MQ=60)
ACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATT > SRR4302537.1540335/1‑94 (MQ=60)
ACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATT < SRR4302537.4910896/94‑1 (MQ=60)
ACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATT < SRR4302537.4628059/94‑1 (MQ=60)
GCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGG < SRR4302537.5920820/94‑1 (MQ=60)
CGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGC > SRR4302537.4549647/1‑94 (MQ=60)
GGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCG > SRR4302537.854030/1‑94 (MQ=60)
GAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGC < SRR4302537.5475173/94‑1 (MQ=60)
GAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGC < SRR4302537.3902444/94‑1 (MQ=60)
AAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCG > SRR4302537.6075658/1‑94 (MQ=60)
AAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCG < SRR4302537.1448349/94‑1 (MQ=60)
ATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGGT > SRR4302537.814327/1‑94 (MQ=60)
GCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGGTGC > SRR4302537.4153507/1‑94 (MQ=60)
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ATAACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGGTGC > NC_000913/2959713‑2959899
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
