Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,115,116 +C coding (2013/2028 nt) b2974 ← putative endoglucanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,115,1151.C98.9% 933.7 / 1.6 266coding (2014/2028 nt)b2974putative endoglucanase
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base C (113/150);  total (114/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 279 total aligned reads displayed.

GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCC  >  NC_000913/3115023‑3115202
                                                                                              |                                                                                       
gTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCAtt‑t                                                                                          >  1:1023355/1‑93 (MQ=255)
    gCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGCTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑cctg                                                                                     >  2:4334695/1‑90 (MQ=255)
    gCTGGTATCTGCACGCAGCAGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑cctg                                                                                     <  1:4508611/93‑4 (MQ=255)
     cTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑cctgc                                                                                    <  2:5885435/93‑5 (MQ=255)
       ggTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCgg                                                                                   <  1:3226383/93‑1 (MQ=255)
       ggTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCgg                                                                                   >  1:4221469/1‑93 (MQ=255)
        gTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGa                                                                                  <  2:4919329/93‑1 (MQ=255)
        gTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGa                                                                                  <  2:3980860/93‑1 (MQ=255)
         tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGAt                                                                                 <  2:6026259/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATTTTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATc                                                                                <  1:4547247/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATc                                                                                <  2:271641/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATc                                                                                <  1:4159612/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATc                                                                                <  2:206355/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATc                                                                                >  2:3263955/1‑93 (MQ=255)
            cTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCga                                                                              >  2:2951891/1‑93 (MQ=255)
            cTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCga                                                                              <  2:902674/93‑1 (MQ=255)
            cTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCga                                                                              <  1:3956604/93‑1 (MQ=255)
              gCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCgaga                                                                            <  2:1309401/93‑1 (MQ=255)
              gCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCgaga                                                                            >  1:6419740/1‑93 (MQ=255)
               cACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGAt                                                                           <  1:2783281/93‑1 (MQ=255)
               cACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGAt                                                                           <  2:5498275/93‑1 (MQ=255)
                aCGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATc                                                                          >  1:1159750/1‑93 (MQ=255)
                 cGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCg                                                                         >  1:5929085/1‑93 (MQ=255)
                   cAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGcc                                                                       <  2:3539984/93‑1 (MQ=255)
                    aGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCa                                                                      <  2:3130638/93‑1 (MQ=255)
                         gATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCt                                                                 >  2:2474771/1‑93 (MQ=255)
                         gATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCt                                                                 <  1:4662271/93‑1 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTa                                                                >  2:2858557/1‑93 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTa                                                                >  1:5431629/1‑93 (MQ=255)
                           ttGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTAc                                                               >  1:1581164/1‑93 (MQ=255)
                            tGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACt                                                              <  1:287222/93‑1 (MQ=255)
                              cATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTa                                                            >  2:2387647/1‑93 (MQ=255)
                              cATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTa                                                            >  1:2712514/1‑93 (MQ=255)
                              cATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTa                                                            >  1:3158429/1‑93 (MQ=255)
                               aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  2:4387566/1‑93 (MQ=255)
                                tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                          <  2:2581072/93‑1 (MQ=255)
                                tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                          >  1:711378/1‑93 (MQ=255)
                                 aaGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAAt                                                         >  2:3639014/1‑93 (MQ=255)
                                 aaGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAAt                                                         >  1:4268790/1‑93 (MQ=255)
                                  aGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATg                                                        <  2:5747182/93‑1 (MQ=255)
                                  aGGATCGTTACCCACCTGAGCCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATg                                                        >  2:4232959/1‑93 (MQ=255)
                                   ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGc                                                       <  1:1361741/93‑1 (MQ=255)
                                   ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGc                                                       >  1:5960999/1‑93 (MQ=255)
                                    gATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCt                                                      >  2:193027/1‑93 (MQ=255)
                                     agcGTTACCCACCCGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTc                                                     <  2:3896121/91‑1 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCa                                                    <  1:4985201/93‑1 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCa                                                    >  1:3887405/1‑93 (MQ=255)
                                       cGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCaa                                                   <  2:1432941/93‑1 (MQ=255)
                                       cGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCaa                                                   <  1:679831/93‑1 (MQ=255)
                                        gTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                  >  2:1748266/1‑93 (MQ=255)
                                         ttACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACa                                                 <  1:4921097/93‑1 (MQ=255)
                                         ttACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACa                                                 <  1:2627202/93‑1 (MQ=255)
                                          tACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACag                                                <  1:546937/93‑1 (MQ=255)
                                           aCCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACaga                                               <  2:4830382/93‑1 (MQ=255)
                                           aCCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACaga                                               <  2:6325803/93‑1 (MQ=255)
                                            cccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACagag                                              >  2:867570/1‑93 (MQ=255)
                                              cACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                            <  1:3306212/93‑1 (MQ=255)
                                              cACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAt                                            <  1:3414558/93‑1 (MQ=255)
                                               aCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATg                                           <  1:2049344/93‑1 (MQ=255)
                                               aCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATg                                           >  1:1864568/1‑93 (MQ=255)
                                                 cTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                         <  1:2447501/93‑1 (MQ=255)
                                                  tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGccg                                        >  1:4694039/1‑92 (MQ=255)
                                                  tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGccc                                        >  2:1252925/1‑93 (MQ=255)
                                                  tGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGccc                                        <  2:3743222/93‑1 (MQ=255)
                                                       cacaTATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaaa                                   >  2:3431201/1‑93 (MQ=255)
                                                        acaTATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaaaa                                  <  1:1231946/93‑1 (MQ=255)
                                                        acaTATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaaaa                                  >  1:5312440/1‑93 (MQ=255)
                                                         caTATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAt                                 >  1:346249/1‑93 (MQ=255)
                                                           tatTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATcc                               >  2:4115781/1‑93 (MQ=255)
                                                           tatTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATcc                               <  1:2974887/93‑1 (MQ=255)
                                                            atTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCg                              <  2:5195088/93‑1 (MQ=255)
                                                            atTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCg                              >  1:4427399/1‑93 (MQ=255)
                                                              tCAAAGCCGTTAAGGATCAGCAGCGGCATTCC‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGa                            <  2:4584620/93‑1 (MQ=255)
                                                              tCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGa                            <  1:5665056/93‑1 (MQ=255)
                                                              tCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGa                            <  1:2235582/93‑1 (MQ=255)
                                                              tCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGa                            <  1:17765/93‑1 (MQ=255)
                                                               cAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAt                           <  1:3667315/93‑1 (MQ=255)
                                                               cAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAt                           >  1:378620/1‑93 (MQ=255)
                                                                  aGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGa                        <  2:1079113/93‑1 (MQ=255)
                                                                   gCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGaa                       <  1:149089/93‑1 (MQ=255)
                                                                   gCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGaa                       <  1:2528794/93‑1 (MQ=255)
                                                                    ccGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAg                      >  1:3252508/1‑93 (MQ=255)
                                                                     cGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGt                     <  1:3070971/93‑1 (MQ=255)
                                                                     cGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGt                     <  2:689129/93‑1 (MQ=255)
                                                                      gTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTc                    <  2:5654520/93‑1 (MQ=255)
                                                                      gTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTc                    >  1:821417/1‑93 (MQ=255)
                                                                         aaGGATCAGCAGCGGCATT‑TCCTGCTGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                 <  1:218242/93‑1 (MQ=255)
                                                                         aaGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                 >  2:6348674/1‑93 (MQ=255)
                                                                          aGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAc                >  2:2219099/1‑93 (MQ=255)
                                                                          aGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAc                <  1:3536391/93‑1 (MQ=255)
                                                                               cagcagCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgc           >  2:4700729/1‑93 (MQ=255)
                                                                                 gcagcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc         <  2:5099053/93‑1 (MQ=255)
                                                                                 gcagcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc         >  1:5178975/1‑93 (MQ=255)
                                                                                 gcagcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc         <  2:2731244/93‑1 (MQ=255)
                                                                                   agcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTg       >  2:4969870/1‑93 (MQ=255)
                                                                                    gcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGt      >  1:5265353/1‑93 (MQ=255)
                                                                                    gcGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGt      <  1:6244314/93‑1 (MQ=255)
                                                                                      ggCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGttt    >  2:6182836/1‑93 (MQ=255)
                                                                                      ggCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGttt    <  1:6003920/93‑1 (MQ=255)
                                                                                        cATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTcc  <  1:4562812/93‑1 (MQ=255)
                                                                                              |                                                                                       
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCC  >  NC_000913/3115023‑3115202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  NC_000913/3115023‑3115209
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GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCTCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑C                                                                                               >  SRR4302537.3955139/1‑94 (MQ=60)
  TTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑Cct                                                                                             <  SRR4302537.6490221/94‑3 (MQ=60)
   TGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑Cctg                                                                                            >  SRR4302537.5682718/1‑91 (MQ=60)
    GCTGGTATCTGCACGCAGCAGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGC                                                                                            <  SRR4302537.4539787/94‑1 (MQ=60)
     CTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCG                                                                                           <  SRR4302537.376540/94‑1 (MQ=60)
      TGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGG                                                                                          >  SRR4302537.4250878/1‑94 (MQ=60)
      TGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGG                                                                                          <  SRR4302537.6292864/94‑1 (MQ=60)
       GGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGA                                                                                         >  SRR4302537.5453688/1‑94 (MQ=60)
       GGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGA                                                                                         <  SRR4302537.3249087/94‑1 (MQ=60)
       GGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGA                                                                                         >  SRR4302537.836560/1‑94 (MQ=60)
        GTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGAT                                                                                        >  SRR4302537.5336384/1‑94 (MQ=60)
        GTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGAT                                                                                        <  SRR4302537.4453804/94‑1 (MQ=60)
        GTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGAT                                                                                        <  SRR4302537.2089639/94‑1 (MQ=60)
        GGATCTGCACGCAGCGGGATTGCATAAGGATCGTTACACACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGAT                                                                                        >  SRR4302537.1717813/1‑94 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATTTTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCG                                                                                      <  SRR4302537.4578718/94‑1 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCG                                                                                      <  SRR4302537.1859613/94‑1 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCG                                                                                      <  SRR4302537.4188662/94‑1 (MQ=60)
           TCTGCACGCAGCGGGATTGCATAAGGATCTTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGA                                                                                     >  SRR4302537.1893832/1‑94 (MQ=60)
            CTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAG                                                                                    <  SRR4302537.3984289/94‑1 (MQ=60)
             TGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGA                                                                                   >  SRR4302537.6463384/1‑94 (MQ=60)
             TGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGA                                                                                   <  SRR4302537.3314180/94‑1 (MQ=60)
             TGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGA                                                                                   >  SRR4302537.3247680/1‑94 (MQ=60)
             TGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGAATT‑TCCTGCGGATCGAGA                                                                                   <  SRR4302537.1061798/94‑1 (MQ=60)
              GCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGAT                                                                                  <  SRR4302537.745700/94‑1 (MQ=60)
              GCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGAT                                                                                  <  SRR4302537.770582/94‑1 (MQ=60)
              GCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGAT                                                                                  <  SRR4302537.2943413/94‑1 (MQ=60)
              GCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCACCGGCATT‑TCCTGCGGATCGAGAT                                                                                  <  SRR4302537.4201561/94‑1 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 >  SRR4302537.3684533/1‑94 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 <  SRR4302537.340912/94‑1 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 >  SRR4302537.1167819/1‑94 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 <  SRR4302537.2802736/94‑1 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 >  SRR4302537.2643793/1‑94 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 >  SRR4302537.2245097/1‑94 (MQ=60)
               CACGCAGCGGGATTGCATAAGAATCGTTACCCGCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATC                                                                                 <  SRR4302537.1818542/94‑1 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCG                                                                                >  SRR4302537.5969771/1‑94 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCG                                                                                <  SRR4302537.4305862/94‑1 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCG                                                                                >  SRR4302537.3729668/1‑94 (MQ=60)
                 CGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGC                                                                               >  SRR4302537.1481222/1‑94 (MQ=60)
                  GCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCC                                                                              <  SRR4302537.5461583/94‑1 (MQ=60)
                     GCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATA                                                                           <  SRR4302537.6287160/94‑1 (MQ=60)
                     GCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATA                                                                           <  SRR4302537.3127363/94‑1 (MQ=60)
                     GCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATA                                                                           <  SRR4302537.422074/94‑1 (MQ=60)
                      CGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAG                                                                          >  SRR4302537.3076683/1‑94 (MQ=60)
                       GGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGC                                                                         <  SRR4302537.3545587/94‑1 (MQ=60)
                       GGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGC                                                                         >  SRR4302537.6020164/1‑94 (MQ=60)
                        GGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCT                                                                        <  SRR4302537.581326/94‑1 (MQ=60)
                        GGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCT                                                                        <  SRR4302537.4021239/94‑1 (MQ=60)
                         GATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTA                                                                       <  SRR4302537.5980098/94‑1 (MQ=60)
                         GATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTA                                                                       <  SRR4302537.4694495/94‑1 (MQ=60)
                         GATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTA                                                                       >  SRR4302537.5468674/1‑94 (MQ=60)
                          ATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTAC                                                                      >  SRR4302537.1592216/1‑94 (MQ=60)
                            TGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTT                                                                    <  SRR4302537.3470645/94‑1 (MQ=60)
                            TGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTT                                                                    <  SRR4302537.289221/94‑1 (MQ=60)
                             GCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTA                                                                   >  SRR4302537.3180599/1‑94 (MQ=60)
                             GCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTA                                                                   >  SRR4302537.6507820/1‑94 (MQ=60)
                             GCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTA                                                                   >  SRR4302537.2731457/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAATCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302537.4714534/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302537.716248/1‑94 (MQ=60)
                                TAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAAT                                                                >  SRR4302537.4298450/1‑94 (MQ=60)
                                  AGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGC                                                              >  SRR4302537.6001914/1‑94 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             <  SRR4302537.5283226/94‑1 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             >  SRR4302537.2609819/1‑94 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             >  SRR4302537.5709726/1‑94 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             <  SRR4302537.1371228/94‑1 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             <  SRR4302537.2323621/94‑1 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             <  SRR4302537.3516903/94‑1 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             >  SRR4302537.1552983/1‑94 (MQ=60)
                                    GATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTC                                                            <  SRR4302537.5213802/94‑1 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCCGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           >  SRR4302537.4572707/1‑94 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           <  SRR4302537.3590628/94‑1 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           >  SRR4302537.3914596/1‑94 (MQ=60)
                                      TCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAA                                                          <  SRR4302537.5019562/94‑1 (MQ=60)
                                      TCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAA                                                          <  SRR4302537.5488203/94‑1 (MQ=60)
                                       CGTTACCCCCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         <  SRR4302537.2038532/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         <  SRR4302537.4553329/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         <  SRR4302537.4255355/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         <  SRR4302537.684492/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         <  SRR4302537.1245310/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         >  SRR4302537.2327604/1‑94 (MQ=60)
                                        GTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACA                                                        >  SRR4302537.284087/1‑94 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       <  SRR4302537.4955043/94‑1 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       >  SRR4302537.4086866/1‑94 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       <  SRR4302537.2645605/94‑1 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       <  SRR4302537.2544501/94‑1 (MQ=60)
                                          TACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGA                                                      <  SRR4302537.550706/94‑1 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     >  SRR4302537.2702322/1‑94 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     >  SRR4302537.4934461/1‑94 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     >  SRR4302537.1779914/1‑94 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     <  SRR4302537.3404104/94‑1 (MQ=60)
                                            CCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGA                                                    >  SRR4302537.391037/1‑94 (MQ=60)
                                            CCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGA                                                    <  SRR4302537.6358171/94‑1 (MQ=60)
                                              CACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATG                                                  <  SRR4302537.4581239/94‑1 (MQ=60)
                                              CACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATG                                                  >  SRR4302537.1877551/1‑94 (MQ=60)
                                              CACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATG                                                  <  SRR4302537.3329584/94‑1 (MQ=60)
                                              CACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATG                                                  <  SRR4302537.3438736/94‑1 (MQ=60)
                                               ACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGC                                                 <  SRR4302537.2063716/94‑1 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTAC‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               >  SRR4302537.4581211/1‑94 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCG                                               >  SRR4302537.4726512/1‑94 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               <  SRR4302537.2464719/94‑1 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               >  SRR4302537.1232937/1‑94 (MQ=60)
                                                  TGAGTCACATATTCAAAGCCGTTAACGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCG                                              >  SRR4302537.305960/1‑94 (MQ=60)
                                                     GTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAA                                           >  SRR4302537.1415150/1‑94 (MQ=60)
                                                      TCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAA                                          >  SRR4302537.1595920/1‑94 (MQ=60)
                                                       CACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAA                                         >  SRR4302537.5348926/1‑94 (MQ=60)
                                                       CACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAA                                         >  SRR4302537.3289980/1‑94 (MQ=60)
                                                        ACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAT                                        >  SRR4302537.4273511/1‑94 (MQ=60)
                                                        ACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAT                                        <  SRR4302537.1240516/94‑1 (MQ=60)
                                                        ACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAT                                        <  SRR4302537.1241676/94‑1 (MQ=60)
                                                        ACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAT                                        >  SRR4302537.348655/1‑94 (MQ=60)
                                                         CATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATC                                       >  SRR4302537.1176684/1‑94 (MQ=60)
                                                           TATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCG                                     >  SRR4302537.4457978/1‑94 (MQ=60)
                                                           TATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCG                                     <  SRR4302537.2995718/94‑1 (MQ=60)
                                                            ATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGG                                    >  SRR4302537.4709125/1‑94 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302537.2251349/94‑1 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302537.17906/94‑1 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  >  SRR4302537.381247/1‑94 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302537.5703815/94‑1 (MQ=60)
                                                               CAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATG                                 <  SRR4302537.3693125/94‑1 (MQ=60)
                                                               CAAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATG                                 >  SRR4302537.3251972/1‑94 (MQ=60)
                                                                AAAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGG                                >  SRR4302537.5270086/1‑94 (MQ=60)
                                                                 AAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGA                               <  SRR4302537.3867088/94‑1 (MQ=60)
                                                                 AAGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGA                               >  SRR4302537.6268755/1‑94 (MQ=60)
                                                                  AGCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAA                              >  SRR4302537.2862944/1‑94 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCATCAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302537.3122226/94‑1 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302537.2502146/94‑1 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302537.2546537/94‑1 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302537.2157543/94‑1 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             >  SRR4302537.3275444/1‑94 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302537.150157/94‑1 (MQ=60)
                                                                    CCGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGT                            <  SRR4302537.497905/94‑1 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           >  SRR4302537.4959671/1‑94 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           >  SRR4302537.827055/1‑94 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           >  SRR4302537.5614449/1‑94 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           >  SRR4302537.6409907/1‑94 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           <  SRR4302537.3092368/94‑1 (MQ=60)
                                                                         AAGGATCAGCAGCGGCATT‑TCCTGCTGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAC                       <  SRR4302537.219798/94‑1 (MQ=60)
                                                                         AAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAC                       <  SRR4302537.696702/94‑1 (MQ=60)
                                                                         AAGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAC                       <  SRR4302537.5095502/94‑1 (MQ=60)
                                                                          AGGATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACG                      <  SRR4302537.3561374/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302537.5486859/94‑1 (MQ=60)
                                                                              TCAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGC                  >  SRR4302537.2945534/1‑94 (MQ=60)
                                                                               CAGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCG                 <  SRR4302537.2670786/94‑1 (MQ=60)
                                                                                AGCAGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGC                >  SRR4302537.5214615/1‑94 (MQ=60)
                                                                                   AGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302537.452855/1‑94 (MQ=60)
                                                                                   AGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302537.5301584/1‑94 (MQ=60)
                                                                                   AGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302537.46057/1‑94 (MQ=60)
                                                                                   AGCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGATCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             <  SRR4302537.275855/94‑1 (MQ=60)
                                                                                    GCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTT            <  SRR4302537.6287227/94‑1 (MQ=60)
                                                                                    GCGGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTT            <  SRR4302537.3269509/94‑1 (MQ=60)
                                                                                     gcgacatctcCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTT            <  SRR4302537.1353187/84‑1 (MQ=60)
                                                                                      GGCATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTC          <  SRR4302537.6045166/94‑1 (MQ=60)
                                                                                        CATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        <  SRR4302537.4594395/94‑1 (MQ=60)
                                                                                        CATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        <  SRR4302537.4609576/94‑1 (MQ=60)
                                                                                        CATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        <  SRR4302537.6030124/94‑1 (MQ=60)
                                                                                         ATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302537.3883836/1‑94 (MQ=60)
                                                                                         ATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302537.4429457/1‑94 (MQ=60)
                                                                                         ATT‑TCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302537.6279373/1‑94 (MQ=60)
                                                                                             C‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAAC   >  SRR4302537.1582056/1‑94 (MQ=60)
                                                                                               CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  SRR4302537.5959352/1‑94 (MQ=60)
                                                                                               CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  <  SRR4302537.2679335/94‑1 (MQ=60)
                                                                                               CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  SRR4302537.4839237/1‑94 (MQ=60)
                                                                                               |                                                                                             
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATT‑T‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  NC_000913/3115023‑3115209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑