Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,170,842 |
T→C |
R99R (CGT→CGC) |
mdaB → |
modulator of drug activity B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,170,842 | 0 | T | C | 96.3%
| 772.5
/ 11.7
| 245 | R99R (CGT→CGC) | mdaB | modulator of drug activity B |
| Reads supporting (aligned to +/- strand): ref base T (3/6); new base C (113/122); total (117/128) |
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 |
Only 100 of 251 total aligned reads displayed.
TGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAA > NC_000913/3170753‑3170930
|
gtggATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCg > 2:2962531/1‑93 (MQ=255)
gtggATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCg < 2:120084/93‑1 (MQ=255)
ggATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCa > 1:3315332/1‑93 (MQ=255)
aTGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCaaa < 2:3921585/93‑1 (MQ=255)
aTGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCaaa < 1:1382964/93‑1 (MQ=255)
aTGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCaaa > 1:5749070/1‑93 (MQ=255)
tGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAg > 1:218825/1‑93 (MQ=255)
gggCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGa < 2:477487/93‑1 (MQ=255)
gggCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGa < 1:6323524/93‑1 (MQ=255)
gcgcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATc < 1:870071/93‑1 (MQ=255)
gcgcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATc < 2:3404964/93‑1 (MQ=255)
cgcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATcc < 1:5373101/93‑1 (MQ=255)
cgcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATcc < 1:2265217/93‑1 (MQ=255)
cgcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATcc < 2:3542060/93‑1 (MQ=255)
gcgcCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCg > 1:5358990/1‑93 (MQ=255)
ccGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCg > 2:1965317/1‑93 (MQ=255)
cGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGa > 1:5133433/1‑93 (MQ=255)
gTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaa > 2:5120154/1‑93 (MQ=255)
tGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaaa < 2:3254618/93‑1 (MQ=255)
gACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaaaaa < 1:3483241/93‑1 (MQ=255)
gACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaaaaa > 2:2439788/1‑93 (MQ=255)
aCAGTGAAAAAATACATTTATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaaaaaa < 2:2714306/93‑1 (MQ=255)
aCAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGaaaaaa > 2:4648643/1‑93 (MQ=255)
cAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAAt > 1:764401/1‑93 (MQ=255)
aGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATa < 2:958709/93‑1 (MQ=255)
aGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATa > 2:2267734/1‑93 (MQ=255)
gTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATAc < 1:1660984/93‑1 (MQ=255)
tGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACg < 2:2107593/93‑1 (MQ=255)
gAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACgg < 1:441085/93‑1 (MQ=255)
gAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGAAGCTGTATGACAGCGATGGTCGCACCCGCAAAGATAAGTCGAAAAAATagcg > 2:5974056/1‑90 (MQ=255)
aaaaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGt > 1:3671847/1‑93 (MQ=255)
aaaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGtt < 2:1662305/93‑1 (MQ=255)
aaaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGtt > 1:4590360/1‑93 (MQ=255)
aaaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGtt < 2:1906055/93‑1 (MQ=255)
aaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTc > 1:2749251/1‑93 (MQ=255)
aaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTc < 2:393882/93‑1 (MQ=255)
aaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTc < 2:3349134/93‑1 (MQ=255)
aaaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTc < 1:1312705/93‑1 (MQ=255)
aaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTcc > 2:718103/1‑93 (MQ=255)
aaaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACCGTTcg > 1:2119214/1‑92 (MQ=255)
aaTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCcg < 1:1251940/93‑1 (MQ=255)
aTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTCTGCCAGCGATGGTCGCACCCGCAAAGACCCGTCGAAAAAATACGGTTCcgg < 1:235074/93‑1 (MQ=255)
aTACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCcgg < 1:1963727/93‑1 (MQ=255)
tACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCcggc < 2:5915247/93‑1 (MQ=255)
tACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCcggc < 2:3136751/93‑1 (MQ=255)
aCATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCcggcg < 1:4841536/93‑1 (MQ=255)
aTTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCggcggc > 1:6333963/1‑93 (MQ=255)
aTTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCggcggc < 2:6243161/93‑1 (MQ=255)
aTTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCggcggc > 2:357123/1‑93 (MQ=255)
aTTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCggcggc > 2:3675338/1‑93 (MQ=255)
aTTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCggcggc < 2:1552685/93‑1 (MQ=255)
ttGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGcc < 1:300258/93‑1 (MQ=255)
gatgatGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTg < 2:6139475/93‑1 (MQ=255)
atgatgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTgg > 1:4665272/1‑93 (MQ=255)
tgatgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGt > 2:1737756/1‑93 (MQ=255)
gatgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTa < 2:2493416/93‑1 (MQ=255)
gatgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTa < 1:6063962/93‑1 (MQ=255)
gatgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTa > 1:5580956/1‑93 (MQ=255)
tgTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACa < 1:1807043/93‑1 (MQ=255)
gTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAg < 1:2927963/93‑1 (MQ=255)
gTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCCGGTACAg > 2:1829912/1‑93 (MQ=255)
aTTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAggg < 2:5215515/93‑1 (MQ=255)
tCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCa > 2:2376356/1‑93 (MQ=255)
cACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCaa > 1:3975584/1‑93 (MQ=255)
ccGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCaaaa > 1:1717301/1‑93 (MQ=255)
gAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCaaaaaa > 1:1540858/1‑93 (MQ=255)
gAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCaaaaaa > 1:3132536/1‑93 (MQ=255)
gAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCaaaaaa > 2:5014804/1‑93 (MQ=255)
aaGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAat < 2:3621096/93‑1 (MQ=255)
aGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAata > 2:1067536/1‑93 (MQ=255)
aGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAata > 1:3569409/1‑93 (MQ=255)
gTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAatata < 2:1328366/93‑1 (MQ=255)
tCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAatatat < 1:4265357/93‑1 (MQ=255)
gcGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGc < 1:1012970/92‑1 (MQ=255)
aCGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGc < 1:3108419/93‑1 (MQ=255)
aCGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGc < 2:5556483/93‑1 (MQ=255)
gggACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCtt < 1:3820938/93‑1 (MQ=255)
gggACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCtt < 1:3707020/93‑1 (MQ=255)
ggACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCttt < 2:4313173/93‑1 (MQ=255)
gACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTtc < 2:6448868/93‑1 (MQ=255)
gACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTtc < 1:5941984/93‑1 (MQ=255)
aCGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGTCTGGTACAGGGCAAAAAATATATGCTTtct > 2:5865088/1‑93 (MQ=255)
gCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTctct > 1:3997601/1‑93 (MQ=255)
tGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGa > 1:2565006/1‑93 (MQ=255)
tGTACGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGa < 1:812659/93‑1 (MQ=255)
tATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGAcc < 1:1024758/93‑1 (MQ=255)
tATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGAcc > 1:5964274/1‑93 (MQ=255)
tATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGAcc > 1:4231636/1‑93 (MQ=255)
aTGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCt > 1:1817948/1‑93 (MQ=255)
tGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTg < 1:5813008/93‑1 (MQ=255)
tGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAAAATATGCTTTCTCTGACCTg < 2:6288913/93‑1 (MQ=255)
cAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGaa < 1:719672/93‑1 (MQ=255)
aGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAAc < 2:2658965/93‑1 (MQ=255)
aGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAAc > 2:1420600/1‑93 (MQ=255)
cGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGc > 1:4376873/1‑93 (MQ=255)
gATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCa > 2:5652815/1‑93 (MQ=255)
tGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCAcc < 1:2064647/93‑1 (MQ=255)
ggTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCa < 1:3249889/93‑1 (MQ=255)
gTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCaa < 2:1808474/93‑1 (MQ=255)
gTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCaa > 1:3447527/1‑93 (MQ=255)
|
TGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAA > NC_000913/3170753‑3170930
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGAA > NC_000913/3170749‑3170935
|
AGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGC > SRR4302537.5246061/1‑94 (MQ=60)
AGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGC > SRR4302537.4905065/1‑94 (MQ=60)
GGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCA < SRR4302537.3982054/94‑1 (MQ=60)
TGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCC < SRR4302537.739657/94‑1 (MQ=60)
TGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCC < SRR4302537.2942547/94‑1 (MQ=60)
GGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCG > SRR4302537.5826135/1‑94 (MQ=60)
TGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCA > SRR4302537.3338784/1‑94 (MQ=60)
TGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCA < SRR4302537.1821359/94‑1 (MQ=60)
GGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGGCGCACCCGCAA > SRR4302537.1737466/1‑94 (MQ=60)
GATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAA > SRR4302537.5788446/1‑94 (MQ=60)
ATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAG < SRR4302537.1392614/94‑1 (MQ=60)
ATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAG > SRR4302537.220383/1‑94 (MQ=60)
ATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAG < SRR4302537.2992224/94‑1 (MQ=60)
TGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGA < SRR4302537.444887/94‑1 (MQ=60)
TGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGA > SRR4302537.3034177/1‑94 (MQ=60)
GGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGAT < SRR4302537.5291346/94‑1 (MQ=60)
GGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGAT < SRR4302537.6366786/94‑1 (MQ=60)
GCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCC < SRR4302537.876046/94‑1 (MQ=60)
GCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCC < SRR4302537.305638/94‑1 (MQ=60)
CGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCG > SRR4302537.5395688/1‑94 (MQ=60)
CGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCG < SRR4302537.2281212/94‑1 (MQ=60)
CGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCG < SRR4302537.5409851/94‑1 (MQ=60)
CGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCG < SRR4302537.627487/94‑1 (MQ=60)
CGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTC < SRR4302537.2129545/94‑1 (MQ=60)
CCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGA > SRR4302537.5168804/1‑94 (MQ=60)
CCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGA > SRR4302537.427508/1‑94 (MQ=60)
CGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGAacctcgtaa > SRR4302537.3501149/1‑85 (MQ=60)
CGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAA < SRR4302537.3732998/94‑1 (MQ=60)
CGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAA > SRR4302537.5382539/1‑94 (MQ=60)
GTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAA > SRR4302537.1614621/1‑94 (MQ=60)
GGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAA > SRR4302537.4597749/1‑94 (MQ=60)
GGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAA > SRR4302537.4976801/1‑94 (MQ=60)
GGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAA < SRR4302537.3999182/94‑1 (MQ=60)
GACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAA > SRR4302537.681563/1‑94 (MQ=60)
GACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAA < SRR4302537.3507882/94‑1 (MQ=60)
ACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAAT > SRR4302537.769629/1‑94 (MQ=60)
CAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATA > SRR4302537.4357539/1‑94 (MQ=60)
CAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATA < SRR4302537.4009309/94‑1 (MQ=60)
CAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATA < SRR4302537.3261701/94‑1 (MQ=60)
AAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATA < SRR4302537.4009308/94‑1 (MQ=60)
AGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATAC < SRR4302537.4209278/94‑1 (MQ=60)
GTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACG > SRR4302537.3613232/1‑94 (MQ=60)
GTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACG < SRR4302537.1672625/94‑1 (MQ=60)
TGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGG > SRR4302537.4302174/1‑94 (MQ=60)
GAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGT > SRR4302537.3697683/1‑94 (MQ=60)
GAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGT < SRR4302537.444146/94‑1 (MQ=60)
GAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGT < SRR4302537.794367/94‑1 (MQ=60)
AAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTT > SRR4302537.2034622/1‑94 (MQ=60)
AAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTT < SRR4302537.3775911/94‑1 (MQ=60)
AAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTT > SRR4302537.4622108/1‑94 (MQ=60)
AAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTC > SRR4302537.2768429/1‑94 (MQ=60)
AAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTC < SRR4302537.65320/94‑1 (MQ=60)
AAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTA > SRR4302537.4083471/1‑94 (MQ=60)
AAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCC < SRR4302537.6370932/94‑1 (MQ=60)
AAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCC < SRR4302537.1321841/94‑1 (MQ=60)
AAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCC > SRR4302537.2373067/1‑94 (MQ=60)
AAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCC < SRR4302537.3310131/94‑1 (MQ=60)
AAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACCGTTCG > SRR4302537.2134130/1‑94 (MQ=60)
AAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCG < SRR4302537.826189/94‑1 (MQ=60)
AAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCG < SRR4302537.98865/94‑1 (MQ=60)
AAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCG < SRR4302537.2352599/94‑1 (MQ=60)
AAATACATTGATGATGTATGCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCG < SRR4302537.861043/94‑1 (MQ=60)
AATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGG > SRR4302537.2821115/1‑94 (MQ=60)
AATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGG > SRR4302537.4745635/1‑94 (MQ=60)
AATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGG < SRR4302537.1283771/94‑1 (MQ=60)
AATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGG < SRR4302537.1260653/94‑1 (MQ=60)
ATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTCTGCCAGCGATGGTCGCACCCGCAAAGACCCGTCGAAAAAATACGGTTCCGGC < SRR4302537.236733/94‑1 (MQ=60)
ATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGC < SRR4302537.1977381/94‑1 (MQ=60)
ATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGC < SRR4302537.5407212/94‑1 (MQ=60)
TACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCG > SRR4302537.1350167/1‑94 (MQ=60)
TACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCG > SRR4302537.5496792/1‑94 (MQ=60)
TACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGACAGCGATGGTCGCAACCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCG > SRR4302537.3488042/1‑94 (MQ=60)
ACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGG < SRR4302537.4874953/94‑1 (MQ=60)
ACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGG > SRR4302537.3729918/1‑94 (MQ=60)
CATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGC > SRR4302537.3898915/1‑94 (MQ=60)
CATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGC > SRR4302537.6377270/1‑94 (MQ=60)
TTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCT < SRR4302537.302352/94‑1 (MQ=60)
TGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTG > SRR4302537.5415663/1‑94 (MQ=60)
TGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTG < SRR4302537.1438835/94‑1 (MQ=60)
GATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGG < SRR4302537.756341/94‑1 (MQ=60)
GATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGG > SRR4302537.4697550/1‑94 (MQ=60)
ATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGT > SRR4302537.3451942/1‑94 (MQ=60)
TGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTA > SRR4302537.5619102/1‑94 (MQ=60)
GATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTAC > SRR4302537.3139152/1‑94 (MQ=60)
GATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTAC < SRR4302537.6105626/94‑1 (MQ=60)
GATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTAC > SRR4302537.5985261/1‑94 (MQ=60)
GATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTAC < SRR4302537.4680723/94‑1 (MQ=60)
GATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTAC < SRR4302537.2588733/94‑1 (MQ=60)
ATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACA < SRR4302537.1031379/94‑1 (MQ=60)
TGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAG < SRR4302537.1819649/94‑1 (MQ=60)
TGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCAGGCGGCCTGGTACAG < SRR4302537.2574285/94‑1 (MQ=60)
GTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGG < SRR4302537.2948524/94‑1 (MQ=60)
TATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGG > SRR4302537.1833572/1‑94 (MQ=60)
TCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAA > SRR4302537.4003411/1‑94 (MQ=60)
CACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAA > SRR4302537.5627493/1‑94 (MQ=60)
ACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAA > SRR4302537.4437449/1‑94 (MQ=60)
ACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAA > SRR4302537.1729286/1‑94 (MQ=60)
ACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAA > SRR4302537.3551068/1‑94 (MQ=60)
CCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAA > SRR4302537.2223984/1‑94 (MQ=60)
CGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAA > SRR4302537.3154517/1‑94 (MQ=60)
CGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAA > SRR4302537.1551612/1‑94 (MQ=60)
CGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAA > SRR4302537.5984683/1‑94 (MQ=60)
GAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAAT > SRR4302537.1758993/1‑94 (MQ=60)
AAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATA > SRR4302537.3594579/1‑94 (MQ=60)
AAGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATA > SRR4302537.1913534/1‑94 (MQ=60)
AGGTCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATAT < SRR4302537.1077044/94‑1 (MQ=60)
TCACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATG < SRR4302537.4294994/94‑1 (MQ=60)
GCGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCT < SRR4302537.1019952/94‑1 (MQ=60)
ACGGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCT < SRR4302537.3130128/94‑1 (MQ=60)
GGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTT > SRR4302537.3156101/1‑94 (MQ=60)
GGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTT < SRR4302537.3733087/94‑1 (MQ=60)
GGGACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTT < SRR4302537.3847729/94‑1 (MQ=60)
GACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCT < SRR4302537.5259790/94‑1 (MQ=60)
GACGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCT < SRR4302537.5982766/94‑1 (MQ=60)
CGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCT > SRR4302537.2272230/1‑94 (MQ=60)
CGCTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCT > SRR4302537.4025589/1‑94 (MQ=60)
CTGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGA > SRR4302537.2582977/1‑94 (MQ=60)
TGTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGAC > SRR4302537.2122359/1‑94 (MQ=60)
TGTACGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGAC < SRR4302537.818228/94‑1 (MQ=60)
GTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACC > SRR4302537.6005210/1‑94 (MQ=60)
GTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACC > SRR4302537.607983/1‑94 (MQ=60)
GTATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACC > SRR4302537.4261092/1‑94 (MQ=60)
TATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCT < SRR4302537.1031806/94‑1 (MQ=60)
TATGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCT > SRR4302537.1830617/1‑94 (MQ=60)
TGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGG < SRR4302537.5852854/94‑1 (MQ=60)
TGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGG < SRR4302537.5850537/94‑1 (MQ=60)
TGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGG < SRR4302537.2200825/94‑1 (MQ=60)
TGCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGG < SRR4302537.1695557/94‑1 (MQ=60)
GCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGA < SRR4302537.1372893/94‑1 (MQ=60)
GCCAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGA < SRR4302537.355012/94‑1 (MQ=60)
CAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAAC < SRR4302537.612898/94‑1 (MQ=60)
CAGCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAAC < SRR4302537.724587/94‑1 (MQ=60)
GCGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGC > SRR4302537.4407096/1‑94 (MQ=60)
CGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCA > SRR4302537.1237567/1‑94 (MQ=60)
CGATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCA < SRR4302537.5896215/94‑1 (MQ=60)
GATGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCAC < SRR4302537.3406374/94‑1 (MQ=60)
GATGGTCGAACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCAC > SRR4302537.1658095/1‑94 (MQ=60)
TGGTCGCAGCCGCAAAGATCCGTCGAAAAAATACGGTTCCCGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCA < SRR4302537.482723/94‑1 (MQ=60)
TGGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCA < SRR4302537.2079144/94‑1 (MQ=60)
GGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAA > SRR4302537.3471914/1‑94 (MQ=60)
GGTCGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAA < SRR4302537.3272795/94‑1 (MQ=60)
CGCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGG < SRR4302537.4259859/94‑1 (MQ=60)
GCACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGA < SRR4302537.1158639/94‑1 (MQ=60)
CACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGAA < SRR4302537.6160749/94‑1 (MQ=60)
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AGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGAA > NC_000913/3170749‑3170935
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
