Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,208,420 |
A→G |
intergenic (‑236/‑2) |
ygjD ← / → rpsU |
putative O‑sialoglycoprotein endopeptidase/30S ribosomal subunit protein S21 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,208,420 | 0 | A | G | 100.0%
| 762.4
/ NA
| 220 | intergenic (‑236/‑2) | ygjD/rpsU | putative O‑sialoglycoprotein endopeptidase/30S ribosomal subunit protein S21 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (123/97); total (123/97) |
Only 100 of 229 total aligned reads displayed.
GCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGG > NC_000913/3208330‑3208509
|
gcagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGc > 1:5325574/1‑93 (MQ=255)
cagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGcc > 1:5210750/1‑93 (MQ=255)
agcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCg < 2:6082869/93‑1 (MQ=255)
agcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCg > 1:3505609/1‑93 (MQ=255)
gcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCgg < 2:3359106/93‑1 (MQ=255)
acaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCgg < 1:4107332/92‑1 (MQ=255)
aaTTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTa > 2:444832/1‑93 (MQ=255)
aaTTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTa > 2:549629/1‑93 (MQ=255)
aTTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGGCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTaa > 2:5327014/1‑93 (MQ=255)
aTTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTaa > 2:2620096/1‑93 (MQ=255)
aTTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTaa > 2:3081499/1‑93 (MQ=255)
gCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTa > 1:2939361/1‑93 (MQ=255)
aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTaaa < 2:3546161/93‑1 (MQ=255)
aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTaaa > 2:380916/1‑93 (MQ=255)
aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTaaa > 2:1904813/1‑93 (MQ=255)
aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTaaa > 1:1869418/1‑93 (MQ=255)
aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTaaa > 1:4784142/1‑93 (MQ=255)
gTAAAATTCCGCACCATTTTGAAATAGGCTGGCGTTGATGCCAGCGGCAAACCGAATGAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAg < 1:4444567/93‑1 (MQ=255)
gTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCCGTAATTAAAg > 2:4832872/1‑93 (MQ=255)
tAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGt < 2:403018/93‑1 (MQ=255)
aaaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTa < 1:737259/93‑1 (MQ=255)
aaaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTa < 2:928768/93‑1 (MQ=255)
aaaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTa < 1:2488761/93‑1 (MQ=255)
aaaTTCCTCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAc < 1:4669492/93‑1 (MQ=255)
aaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAc > 2:2328402/1‑93 (MQ=255)
aaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAc < 2:2833242/93‑1 (MQ=255)
ttCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTg > 2:1208804/1‑93 (MQ=255)
tCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGa < 2:5739580/93‑1 (MQ=255)
cGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGaaa > 2:3211182/1‑93 (MQ=255)
gCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGaaaa < 2:2546052/93‑1 (MQ=255)
cACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAAc < 1:4959242/93‑1 (MQ=255)
cACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAAc > 1:848906/1‑93 (MQ=255)
cACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAAc < 2:2865148/93‑1 (MQ=255)
aCCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACg < 1:6299939/93‑1 (MQ=255)
ccATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGa > 2:2004514/1‑93 (MQ=255)
ccATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGa > 2:4156550/1‑93 (MQ=255)
ccATGTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTTAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGa < 1:3228864/93‑1 (MQ=255)
acATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGa < 2:4077030/92‑1 (MQ=255)
aTTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGc < 2:1771958/93‑1 (MQ=255)
tGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGtt < 2:4191612/93‑1 (MQ=255)
aaaTAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTCATTAAAGTACGCGAAAACGAGCCGTTCg > 2:1965931/1‑93 (MQ=255)
aaTAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGa > 2:1260391/1‑93 (MQ=255)
aaTAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGa > 2:1384669/1‑93 (MQ=255)
aaTAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGa > 1:5511883/1‑93 (MQ=255)
aTAAGCTGCCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAc < 1:5655444/93‑1 (MQ=255)
tAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACg < 1:2068580/93‑1 (MQ=255)
tAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACg > 1:4088859/1‑93 (MQ=255)
aGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTa < 2:6474628/93‑1 (MQ=255)
aGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGACGTTCGACGTa > 1:6033846/1‑93 (MQ=255)
gcgggCGTTGATGCCAGCGGCAAACCAAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAg < 1:39795/90‑1 (MQ=255)
gCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAg > 1:3736630/1‑93 (MQ=255)
tGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGct > 2:5003420/1‑93 (MQ=255)
ggCGTTGATGCCAGCGGCAACCCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGctc < 2:4488244/93‑1 (MQ=255)
ctttGATGCCAGCGACAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTg < 2:3778175/91‑1 (MQ=255)
gTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGc > 2:4891481/1‑93 (MQ=255)
ttGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCg > 1:976435/1‑93 (MQ=255)
ttGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCg > 1:3248279/1‑93 (MQ=255)
ttGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCg > 1:5032348/1‑93 (MQ=255)
gATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTc < 1:4832197/93‑1 (MQ=255)
gATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTc < 1:3836077/93‑1 (MQ=255)
aTGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCg > 2:1483869/1‑93 (MQ=255)
tGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGc < 2:2802839/93‑1 (MQ=255)
tGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGc > 1:5626958/1‑93 (MQ=255)
tGCCAGCGGCAAACCGAATTAACCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGc < 2:771853/93‑1 (MQ=255)
gCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCt < 2:4394016/93‑1 (MQ=255)
cAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTc > 1:105544/1‑93 (MQ=255)
gCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCaa > 2:2922890/1‑93 (MQ=255)
ggCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGc > 1:3301839/1‑93 (MQ=255)
ggCAAACCGAATAAATAAAAGGTGAGAGGCGCATGCCGGTAATGAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGc < 1:168067/93‑1 (MQ=255)
cAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGt > 1:1349939/1‑93 (MQ=255)
cAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGt < 2:2224785/93‑1 (MQ=255)
cAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGt > 2:2997934/1‑93 (MQ=255)
aaaCCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGtt > 1:4219628/1‑93 (MQ=255)
aaCCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTc > 2:2678321/1‑93 (MQ=255)
aaCCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTc > 1:2972801/1‑93 (MQ=255)
aaCCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTc > 1:6256485/1‑93 (MQ=255)
cGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTg > 1:5974580/1‑93 (MQ=255)
cGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTg > 2:6272371/1‑93 (MQ=255)
gAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGc > 1:5170053/1‑93 (MQ=255)
gAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGc < 2:1440470/93‑1 (MQ=255)
gAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGc > 2:6187667/1‑93 (MQ=255)
gAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGc > 1:2174820/1‑93 (MQ=255)
aaTCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaaaa > 1:1159724/1‑93 (MQ=255)
aaTCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaaaa > 2:614495/1‑93 (MQ=255)
aTCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaaaaa > 2:895689/1‑93 (MQ=255)
tCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAg < 2:4797367/93‑1 (MQ=255)
aaaGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCa > 1:542423/1‑93 (MQ=255)
aaGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAATCGTTCCTGCGAAAAAGCAg > 1:4267326/1‑93 (MQ=255)
aaGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAg > 2:3386215/1‑93 (MQ=255)
ggTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgt < 1:5725328/93‑1 (MQ=255)
ggTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgt > 2:2641307/1‑93 (MQ=255)
gaaagagGCGCAGGCCTGTAATTAAAGGACGTGAAGACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgtg < 2:2267223/90‑1 (MQ=255)
gTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgtg < 1:3650502/93‑1 (MQ=255)
tGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgtgt > 2:3026449/1‑93 (MQ=255)
tGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgtgt > 2:1323876/1‑93 (MQ=255)
agagGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTc > 1:2787899/1‑93 (MQ=255)
gagGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCt > 2:1986011/1‑93 (MQ=255)
gagGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCt < 1:4603961/93‑1 (MQ=255)
agGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTg < 2:5889887/93‑1 (MQ=255)
ggCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTgg > 2:6020707/1‑93 (MQ=255)
|
GCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGG > NC_000913/3208330‑3208509
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCG > NC_000913/3208327‑3208511
|
AAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCG < SRR4302537.2918640/94‑1 (MQ=60)
AAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCG > SRR4302537.2307055/1‑94 (MQ=60)
GCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCAT < SRR4302537.522816/94‑1 (MQ=60)
GCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCAT < SRR4302537.3553874/94‑1 (MQ=60)
GCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCAT < SRR4302537.5995695/94‑1 (MQ=60)
CAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATG < SRR4302537.1615450/94‑1 (MQ=60)
CAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATG < SRR4302537.2971476/94‑1 (MQ=60)
AGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGC > SRR4302537.5362118/1‑94 (MQ=60)
AGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGC < SRR4302537.4293298/94‑1 (MQ=60)
GCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCC > SRR4302537.5246581/1‑94 (MQ=60)
CAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCG > SRR4302537.3530414/1‑94 (MQ=60)
AGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGG > SRR4302537.4125957/1‑94 (MQ=60)
AGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGG > SRR4302537.5684890/1‑94 (MQ=60)
AGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGG > SRR4302537.4868993/1‑94 (MQ=60)
GCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGT < SRR4302537.6498378/94‑1 (MQ=60)
ACAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGT < SRR4302537.4136025/94‑1 (MQ=60)
CAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTA > SRR4302537.4060344/1‑94 (MQ=60)
CAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTA > SRR4302537.3936466/1‑94 (MQ=60)
AATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAA > SRR4302537.3524858/1‑94 (MQ=60)
TGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTA > SRR4302537.2959996/1‑94 (MQ=60)
GCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAA > SRR4302537.6326585/1‑94 (MQ=60)
CAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAA > SRR4302537.4817161/1‑94 (MQ=60)
CAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAA > SRR4302537.2884018/1‑94 (MQ=60)
CAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAA > SRR4302537.1882432/1‑94 (MQ=60)
CAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAA > SRR4302537.5616466/1‑94 (MQ=60)
GTAAAATTCCGCACCATTTTGAAATAGGCTGGCGTTGATGCCAGCGGCAAACCGAATGAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGT < SRR4302537.4475266/94‑1 (MQ=60)
GTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGT < SRR4302537.4858174/94‑1 (MQ=60)
AAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAC < SRR4302537.2506293/94‑1 (MQ=60)
AAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAC < SRR4302537.742285/94‑1 (MQ=60)
AAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAC < SRR4302537.44141/94‑1 (MQ=60)
AAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTAC < SRR4302537.3720314/94‑1 (MQ=60)
AAATTCCTCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACG < SRR4302537.4701797/94‑1 (MQ=60)
CCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAA > SRR4302537.469640/1‑94 (MQ=60)
GCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAAC > SRR4302537.854722/1‑94 (MQ=60)
GCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAAC > SRR4302537.710785/1‑94 (MQ=60)
CACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACG > SRR4302537.5392470/1‑94 (MQ=60)
CACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACG < SRR4302537.4993427/94‑1 (MQ=60)
ACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGA > SRR4302537.1819517/1‑94 (MQ=60)
ACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGA < SRR4302537.872246/94‑1 (MQ=60)
ACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGA < SRR4302537.6343087/94‑1 (MQ=60)
ACCATGTAGAAATAAGCTGGCGTTGATGCCATCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGA < SRR4302537.848415/94‑1 (MQ=60)
CCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAG < SRR4302537.553402/94‑1 (MQ=60)
CCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAG < SRR4302537.6272100/94‑1 (MQ=60)
CCATGTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTTAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAG < SRR4302537.3251620/94‑1 (MQ=60)
TTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGT > SRR4302537.3988706/1‑94 (MQ=60)
TGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTC < SRR4302537.3310041/94‑1 (MQ=60)
TGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTC > SRR4302537.5563755/1‑94 (MQ=60)
GAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGTCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCG > SRR4302537.1075553/1‑94 (MQ=60)
AAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGA > SRR4302537.5549520/1‑94 (MQ=60)
AATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGAC > SRR4302537.3768519/1‑94 (MQ=60)
ATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG > SRR4302537.4117413/1‑94 (MQ=60)
ATAAGCTGCCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACG < SRR4302537.5694146/94‑1 (MQ=60)
TAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGT > SRR4302537.4608954/1‑94 (MQ=60)
TAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGT < SRR4302537.2083114/94‑1 (MQ=60)
AAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGACGTTCGACGTA > SRR4302537.6075306/1‑94 (MQ=60)
AGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAG > SRR4302537.3762872/1‑94 (MQ=60)
GCGGGCGTTGATGCCAGCGGCAAACCAAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGC < SRR4302537.40095/94‑1 (MQ=60)
CTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATAAAAGTACGTGAAAACGAGCCGTTCGACGTAGCT < SRR4302537.5052526/94‑1 (MQ=60)
GGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCT < SRR4302537.4712291/94‑1 (MQ=60)
GCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTG < SRR4302537.5922537/94‑1 (MQ=60)
GCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTG > SRR4302537.6074232/1‑94 (MQ=60)
GTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCG > SRR4302537.5066994/1‑94 (MQ=60)
GTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCG > SRR4302537.983168/1‑94 (MQ=60)
GTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCG > SRR4302537.3225917/1‑94 (MQ=60)
GTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCG > SRR4302537.3271176/1‑94 (MQ=60)
TGAGGCCAGCGGCAAACCGAATTAAGCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTC < SRR4302537.2673295/94‑1 (MQ=60)
GATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCG < SRR4302537.4865564/94‑1 (MQ=60)
GATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCG < SRR4302537.3862958/94‑1 (MQ=60)
ATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGC > SRR4302537.5665453/1‑94 (MQ=60)
GCCAGCGCCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTT < SRR4302537.3265669/94‑1 (MQ=60)
CCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTC > SRR4302537.106304/1‑94 (MQ=60)
CCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTC > SRR4302537.1937154/1‑94 (MQ=60)
CCAGCGGCAAACCGAATTAATCAAAGGTGAGAGCCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTC < SRR4302537.3069959/94‑1 (MQ=60)
CAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCA > SRR4302537.2140642/1‑94 (MQ=60)
GCGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAG < SRR4302537.1307642/94‑1 (MQ=60)
CGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGC > SRR4302537.4901745/1‑94 (MQ=60)
CGGCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGC > SRR4302537.3325185/1‑94 (MQ=60)
GGCAAACCGAATAAATAAAAGGTGAGAGGCGCATGCCGGTAATGAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCG < SRR4302537.169267/94‑1 (MQ=60)
GCAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGT > SRR4302537.1359345/1‑94 (MQ=60)
CAAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTT > SRR4302537.4249029/1‑94 (MQ=60)
AAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTC > SRR4302537.1800975/1‑94 (MQ=60)
AAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTC > SRR4302537.53230/1‑94 (MQ=60)
AAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTC > SRR4302537.5315312/1‑94 (MQ=60)
AAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTC > SRR4302537.6299459/1‑94 (MQ=60)
AAACCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTC > SRR4302537.2993627/1‑94 (MQ=60)
CCGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTG > SRR4302537.6015593/1‑94 (MQ=60)
CGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGC < SRR4302537.3512952/94‑1 (MQ=60)
CGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGC > SRR4302537.5205656/1‑94 (MQ=60)
CGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGC > SRR4302537.2190150/1‑94 (MQ=60)
CGAATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGC > SRR4302537.2226454/1‑94 (MQ=60)
ATTAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAA < SRR4302537.5095439/94‑1 (MQ=60)
TAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAA < SRR4302537.4647633/94‑1 (MQ=60)
TAATCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAA > SRR4302537.1167793/1‑94 (MQ=60)
TCAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGC > SRR4302537.5751440/1‑94 (MQ=60)
CAAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCA > SRR4302537.546156/1‑94 (MQ=60)
CAAAGGGGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCA < SRR4302537.4191833/94‑1 (MQ=60)
AAAGGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAATCGTTCCTGCGAAAAAGCAG > SRR4302537.4296976/1‑94 (MQ=60)
GGTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTG < SRR4302537.5764519/94‑1 (MQ=60)
GTGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGT < SRR4302537.3676197/94‑1 (MQ=60)
TGAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTT > SRR4302537.2363383/1‑94 (MQ=60)
GAGAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTC > SRR4302537.2807393/1‑94 (MQ=60)
GAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTG < SRR4302537.4635837/94‑1 (MQ=60)
GAGGCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTG < SRR4302537.4224503/94‑1 (MQ=60)
GCGCATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCG < SRR4302537.4811530/94‑1 (MQ=60)
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AAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCG > NC_000913/3208327‑3208511
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
