Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,222,944 |
4 bp→AGCA |
coding (2671‑2674/3093 nt) |
b3076 → |
evolved beta‑D‑galactosidase alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,222,944 | 0 | C | A | 100.0%
| 705.7
/ NA
| 198 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (93/105); total (93/105) |
| * | NC_000913 | 3,222,945 | 0 | A | G | 100.0%
| 680.6
/ NA
| 198 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/105); total (93/105) |
| * | NC_000913 | 3,222,946 | 0 | A | C | 99.5%
| 674.4
/ NA
| 198 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (92/105); total (93/105) |
| Fisher's exact test for biased strand distribution p-value = 4.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | NC_000913 | 3,222,947 | 0 | G | A | 99.5%
| 685.7
/ NA
| 198 | A892T (GCC→ACC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (93/104); total (93/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 202 total aligned reads displayed.
TACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222860‑3223027
||||
tACGATTAGATCGCGTATTATGGTCGTGGCCCGGGCGAAAACTACGCCGCAAGCAAGCAGGCTAACCTCATCGATATCTGGCGCAGCGCCGTc < 2:3210236/93‑1 (MQ=255)
gATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGAt > 2:4685836/1‑93 (MQ=255)
gATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGAt > 1:1918728/1‑93 (MQ=255)
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 1:2373192/1‑93 (MQ=255)
tCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGc > 1:1303677/1‑93 (MQ=255)
cAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGcc < 2:2701889/93‑1 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTACCATCATCGATATCTGGCGCAGCACCGCCGATGCCa > 1:888963/1‑93 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGcct > 2:813860/1‑92 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa < 1:1825780/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCAt < 1:2583898/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGAACCGTCGATGCCAt > 1:4222167/1‑93 (MQ=255)
ggTGGCGTATGACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTACCATCATCGATATCTGGCGCAGCACCGTCGATGCCAt < 2:220477/93‑1 (MQ=255)
gTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATg < 1:3676854/93‑1 (MQ=255)
gTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATg > 2:1566613/1‑93 (MQ=255)
tGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGGCATGt < 1:5868322/93‑1 (MQ=255)
tGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGt > 1:1413634/1‑93 (MQ=255)
ggCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGtt > 2:5617204/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 2:3556712/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 2:287988/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 2:1021880/1‑93 (MQ=255)
aTTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgaga > 2:2127411/1‑93 (MQ=255)
aTTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgaga < 1:1523797/93‑1 (MQ=255)
ttACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGaa < 2:1819650/93‑1 (MQ=255)
ttACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGaa > 2:6051568/1‑93 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 2:5488630/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 1:1935740/93‑1 (MQ=255)
ggTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt < 1:3396707/93‑1 (MQ=255)
ggTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt > 2:5953273/1‑93 (MQ=255)
ggTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt > 1:1273527/1‑93 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc > 1:3096791/1‑93 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc < 2:6186209/93‑1 (MQ=255)
tCGTGGACCGGGCGAACACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATcc < 2:2798339/93‑1 (MQ=255)
gcGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATcc < 1:4797247/92‑1 (MQ=255)
gcGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATcc < 2:599386/92‑1 (MQ=255)
cGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATccc < 2:5881986/93‑1 (MQ=255)
tGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCtt > 1:5185875/1‑93 (MQ=255)
gACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc > 1:3721487/1‑93 (MQ=255)
aCCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTccc < 1:4168907/93‑1 (MQ=255)
cGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGc > 2:3067482/1‑93 (MQ=255)
cGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGc > 2:1882186/1‑93 (MQ=255)
cGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGc < 1:2235003/93‑1 (MQ=255)
gggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCa < 2:1267211/93‑1 (MQ=255)
ggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAg > 1:6205632/1‑93 (MQ=255)
ggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAg > 2:3907487/1‑93 (MQ=255)
cGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaa < 1:2665510/93‑1 (MQ=255)
gAAAACTACGCGGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac < 2:3139748/93‑1 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac < 1:1595757/93‑1 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac > 2:1989194/1‑93 (MQ=255)
aaaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaaca > 2:2683910/1‑93 (MQ=255)
aaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaa < 1:3546277/93‑1 (MQ=255)
aaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaa < 1:4889585/93‑1 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac > 2:6234228/1‑93 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 1:1733131/93‑1 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 2:4258853/93‑1 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 1:4006735/93‑1 (MQ=255)
aCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACg < 2:4496306/93‑1 (MQ=255)
cTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACgg < 1:3630819/93‑1 (MQ=255)
cTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACgg < 1:605856/93‑1 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGt > 2:1373639/1‑93 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGt < 2:2057265/93‑1 (MQ=255)
aCGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa > 1:4977287/1‑93 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 1:1551854/93‑1 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 1:3049877/93‑1 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 1:1101633/93‑1 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 1:609008/93‑1 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc < 1:5627651/93‑1 (MQ=255)
cGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCg < 2:4965246/93‑1 (MQ=255)
cGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATACCTTCCCGCAGAACAACGGTAACCg > 2:5125784/1‑93 (MQ=255)
gACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACACCGGTAACCGt < 2:4237709/93‑1 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCTCTTCCCGCAGAACAACGGTAACTGTc > 1:3574234/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc < 2:2486559/93‑1 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc > 1:2116962/1‑93 (MQ=255)
agccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGTGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAg < 2:5292275/93‑1 (MQ=255)
agccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAg < 1:2367753/93‑1 (MQ=255)
agccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAg < 1:1453446/93‑1 (MQ=255)
agccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAg > 2:6162276/1‑93 (MQ=255)
ccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCa < 1:735398/93‑1 (MQ=255)
cagcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAt > 1:4540541/1‑93 (MQ=255)
cagcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAt < 2:5236686/93‑1 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg < 2:4437050/93‑1 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg < 1:492806/93‑1 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTTCCGCAGAACAAAGGTAACAGTCAGCATga > 1:5091669/1‑92 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGt > 2:5450640/1‑93 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGt < 2:4369813/93‑1 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGt > 2:4579513/1‑93 (MQ=255)
gCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc > 1:832956/1‑93 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGACCTATCCCTCCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt < 2:2277978/93‑1 (MQ=255)
aaCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTgg < 1:6471338/93‑1 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa < 2:3763798/93‑1 (MQ=255)
atcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGTACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACg > 2:6476229/1‑93 (MQ=255)
tcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACgg < 2:4179343/93‑1 (MQ=255)
catcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGc < 1:2925682/93‑1 (MQ=255)
atcGATATCTGGCGCAGCACCGTCGATGCCATGTTAGAGAACTATCCCTTCCCGCAGAACAACGGCAACCGTCAGCATGTCCGCTGGACGGCa > 2:2342596/1‑93 (MQ=255)
tcGATATCTGGCGCAGCACCGTCGATCCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAc < 2:4137647/93‑1 (MQ=255)
atatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGa < 2:3402103/93‑1 (MQ=255)
atatCTGGCGCAGCACCATCGATGCCATGTTCGAGAACTATCCCTCCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGa < 1:6323239/93‑1 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAc < 2:896296/93‑1 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAc > 2:1720636/1‑93 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGCACGGCACTGAc > 1:5137686/1‑93 (MQ=255)
atCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACt < 1:4685836/93‑1 (MQ=255)
||||
TACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222860‑3223027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222864‑3223027
|
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGC > SRR4302537.5053421/1‑94 (MQ=60)
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGC < SRR4302537.3646257/94‑1 (MQ=60)
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGC > SRR4302537.1312742/1‑94 (MQ=60)
TCAGGTGGCGTATTTCGGTCGTGGACCGGGCGAAACCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCC < SRR4302537.867802/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302537.1838504/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑AGAACCGTCGATGCCAT > SRR4302537.4251577/1‑94 (MQ=60)
GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATG < SRR4302537.2954135/94‑1 (MQ=60)
GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATG < SRR4302537.1886122/94‑1 (MQ=60)
GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATG < SRR4302537.2601982/94‑1 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGT > SRR4302537.1423473/1‑94 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGT > SRR4302537.1552249/1‑94 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGT < SRR4302537.3702721/94‑1 (MQ=60)
TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGGCATGTT < SRR4302537.5908582/94‑1 (MQ=60)
TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTT < SRR4302537.3920538/94‑1 (MQ=60)
GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTC < SRR4302537.3745076/94‑1 (MQ=60)
CGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGA < SRR4302537.1306054/94‑1 (MQ=60)
CGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGA > SRR4302537.2277411/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG > SRR4302537.3641355/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG < SRR4302537.5008218/94‑1 (MQ=60)
TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGA < SRR4302537.517207/94‑1 (MQ=60)
ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAA < SRR4302537.1534440/94‑1 (MQ=60)
TACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACT > SRR4302537.2187389/1‑94 (MQ=60)
ACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTA < SRR4302537.3313810/94‑1 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTAT < SRR4302537.1949202/94‑1 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTAT < SRR4302537.762952/94‑1 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTAT > SRR4302537.1282381/1‑94 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302537.3420766/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302537.1954249/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATC > SRR4302537.3118402/1‑94 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCC > SRR4302537.1585058/1‑94 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCC < SRR4302537.5783232/94‑1 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCC < SRR4302537.2821430/94‑1 (MQ=60)
GCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCC < SRR4302537.4830350/94‑1 (MQ=60)
CGTGGACCGGGCGAAACCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT < SRR4302537.4138830/94‑1 (MQ=60)
CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT > SRR4302537.3570439/1‑94 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT < SRR4302537.669217/94‑1 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT > SRR4302537.5221545/1‑94 (MQ=60)
TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC < SRR4302537.1942517/94‑1 (MQ=60)
GGACCGGGCGAAAACTACGCCGACAGCCGGCAGGCTAACATAATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC > SRR4302537.5187223/1‑94 (MQ=60)
GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC > SRR4302537.5187224/1‑94 (MQ=60)
GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC > SRR4302537.3747633/1‑94 (MQ=60)
GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC < SRR4302537.550070/94‑1 (MQ=60)
ACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCG < SRR4302537.4198026/94‑1 (MQ=60)
ACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCG < SRR4302537.1728499/94‑1 (MQ=60)
CGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCA < SRR4302537.2250768/94‑1 (MQ=60)
CGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCA > SRR4302537.2399916/1‑94 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG < SRR4302537.4734585/94‑1 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG > SRR4302537.6248396/1‑94 (MQ=60)
CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC < SRR4302537.2684131/94‑1 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA < SRR4302537.1606907/94‑1 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302537.5945503/1‑94 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302537.3093626/1‑94 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC < SRR4302537.4923351/94‑1 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC < SRR4302537.3571329/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG > SRR4302537.4838066/1‑94 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302537.1745223/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302537.4034777/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302537.422928/94‑1 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT < SRR4302537.3656404/94‑1 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT < SRR4302537.1456808/94‑1 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT < SRR4302537.609996/94‑1 (MQ=60)
TACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTA > SRR4302537.5011592/1‑94 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC < SRR4302537.613170/94‑1 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC < SRR4302537.1139231/94‑1 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC < SRR4302537.1109246/94‑1 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC < SRR4302537.1562680/94‑1 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC < SRR4302537.3071128/94‑1 (MQ=60)
CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG > SRR4302537.4457037/1‑94 (MQ=60)
CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG < SRR4302537.5666150/94‑1 (MQ=60)
CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT > SRR4302537.2602534/1‑94 (MQ=60)
GACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCTCTTCCCGCAGAACAACGGTAACTGTC > SRR4302537.3599444/1‑94 (MQ=60)
GACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTC > SRR4302537.2131873/1‑94 (MQ=60)
AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC < SRR4302537.1463579/94‑1 (MQ=60)
AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC < SRR4302537.2384442/94‑1 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT > SRR4302537.4571969/1‑94 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT < SRR4302537.740415/94‑1 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT > SRR4302537.4571970/1‑94 (MQ=60)
AGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTTCCGCAGAACAAAGGTAACAGTCAGCATGA > SRR4302537.5126727/1‑94 (MQ=60)
AGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGT < SRR4302537.496202/94‑1 (MQ=60)
GCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTC > SRR4302537.6337110/1‑94 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC < SRR4302537.2385332/94‑1 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC < SRR4302537.3661404/94‑1 (MQ=60)
GGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGC > SRR4302537.838654/1‑94 (MQ=60)
GCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCT < SRR4302537.1828132/94‑1 (MQ=60)
GCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCT < SRR4302537.6104992/94‑1 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG > SRR4302537.1501136/1‑94 (MQ=60)
TAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGC > SRR4302537.1343187/1‑94 (MQ=60)
AACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGA < SRR4302537.6515217/94‑1 (MQ=60)
ATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGG > SRR4302537.6172218/1‑94 (MQ=60)
CATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCA < SRR4302537.2946229/94‑1 (MQ=60)
ATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302537.6384696/1‑94 (MQ=60)
ATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302537.4953021/1‑94 (MQ=60)
CGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG > SRR4302537.2694793/1‑94 (MQ=60)
GATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGA > SRR4302537.2045118/1‑94 (MQ=60)
ATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGCACGGCACTGAC > SRR4302537.5173089/1‑94 (MQ=60)
TATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT < SRR4302537.953831/94‑1 (MQ=60)
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ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222864‑3223027
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
