Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,987,546 |
A→G |
G285G (GGT→GGC) |
hemC ← |
porphobilinogen deaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,987,546 | 0 | A | G | 99.5%
| 603.5
/ ‑4.8
| 190 | G285G (GGT→GGC) | hemC | porphobilinogen deaminase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (99/88); total (100/90) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01 |
Only 100 of 204 total aligned reads displayed.
GTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTA > NC_000913/3987456‑3987635
|
ttATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCcg > 1:3263418/1‑93 (MQ=255)
ttATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCcg > 2:1250981/1‑93 (MQ=255)
ttATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCcg > 2:3325205/1‑93 (MQ=255)
tataGACTTCAGCGAGGATCTCGGGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGcgccgc < 2:1977125/93‑1 (MQ=255)
tataGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGcgccgc > 1:4958001/1‑93 (MQ=255)
ataGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCcgcg > 1:2132635/1‑93 (MQ=255)
taGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCgcgg > 2:656881/1‑93 (MQ=255)
taGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCgcgg > 2:3720599/1‑93 (MQ=255)
gACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCgcggcg > 1:1021098/1‑93 (MQ=255)
gACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCgcggcg > 2:5352067/1‑93 (MQ=255)
aCTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGt < 2:3469055/93‑1 (MQ=255)
aCTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGt < 1:2172503/93‑1 (MQ=255)
aCTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGt < 2:1465785/93‑1 (MQ=255)
ttCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGACATCCCCATTTGTTCGGCGTCTTGCGTCGCGCCGCGGCGTTc > 1:5713995/1‑93 (MQ=255)
ttCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTc > 2:6392566/1‑93 (MQ=255)
tCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCa > 2:3073584/1‑93 (MQ=255)
tCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCa < 1:5265575/93‑1 (MQ=255)
tCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCa > 2:833183/1‑93 (MQ=255)
cAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCAc < 1:1492506/93‑1 (MQ=255)
gCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCAccc > 2:3046476/1‑92 (MQ=255)
gCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACcg > 1:1110204/1‑93 (MQ=255)
gAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACcgcg > 1:4614746/1‑93 (MQ=255)
aGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGa > 2:5862280/1‑93 (MQ=255)
tctcGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGaataa > 1:3985155/1‑93 (MQ=255)
tctcGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGaataa < 1:4171186/93‑1 (MQ=255)
ctcGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGaataat > 1:2880238/1‑93 (MQ=255)
tcGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATc < 2:1606392/93‑1 (MQ=255)
cgcgcgcCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGc < 1:1610058/93‑1 (MQ=255)
cgcgcCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGa < 1:3720332/93‑1 (MQ=255)
gcgcCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCaaa < 2:2437485/93‑1 (MQ=255)
gcgcCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGaa < 2:1230861/93‑1 (MQ=255)
gcCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAAcc > 2:741456/1‑93 (MQ=255)
cGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGt < 2:1825720/93‑1 (MQ=255)
cGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCAATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCAAACCGt > 2:788822/1‑93 (MQ=255)
gTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGCACCGTc > 2:584646/1‑93 (MQ=255)
gTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTc > 1:4358814/1‑93 (MQ=255)
ttATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTcc < 1:466811/93‑1 (MQ=255)
ttATTCAGTAGCTCTTCTGCCAGCGAAACCCCCATTTGTTCGGCATCTTGCGTCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTcc < 1:2018609/93‑1 (MQ=255)
tATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccg > 2:406010/1‑93 (MQ=255)
tATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccg > 1:5523090/1‑93 (MQ=255)
tATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccg < 2:2208856/93‑1 (MQ=255)
ttCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccggc > 2:6219735/1‑93 (MQ=255)
aGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccggcgcg > 1:2574489/1‑90 (MQ=255)
aGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccggcgcg > 1:6278360/1‑90 (MQ=255)
gTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTccggcgcgc < 2:3856961/93‑5 (MQ=255)
ctctTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAc < 2:1387203/93‑1 (MQ=255)
tcttctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGAcc < 1:630855/93‑1 (MQ=255)
tctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAgc < 1:274289/93‑1 (MQ=255)
ctGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAgcg < 1:2158689/93‑1 (MQ=255)
tGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAgcgc > 1:3646747/1‑93 (MQ=255)
tGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAgcgc < 2:5770313/93‑1 (MQ=255)
ccAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCTCCGACCAGcgcac < 2:280352/93‑1 (MQ=255)
ccAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcac > 2:2114266/1‑93 (MQ=255)
ccAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcac > 2:3959440/1‑93 (MQ=255)
cAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacg > 1:4241322/1‑93 (MQ=255)
cAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacg > 2:3152791/1‑93 (MQ=255)
aGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgc > 2:1735451/1‑93 (MQ=255)
gCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgca > 2:5310762/1‑93 (MQ=255)
gCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGcgcacgca > 2:3814162/1‑93 (MQ=255)
gAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGc > 2:451195/1‑93 (MQ=255)
gAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGc < 2:2008891/93‑1 (MQ=255)
aaTCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACGGCGAATAATCTGCGGACCGTCCGGCGCGCCGACCATCGCCCGCCGCCa > 2:5695696/1‑93 (MQ=255)
aaTCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCa < 1:1132423/93‑1 (MQ=255)
aaTCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCa < 1:641576/93‑1 (MQ=255)
aaTCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCa > 1:6178889/1‑93 (MQ=255)
aTCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAg > 1:3560764/1‑93 (MQ=255)
tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGa > 2:4333855/1‑93 (MQ=255)
tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGa > 1:520979/1‑93 (MQ=255)
tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGa > 1:1424160/1‑93 (MQ=255)
tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGa > 1:459237/1‑93 (MQ=255)
tCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGa < 2:3617537/93‑1 (MQ=255)
cccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAtt > 1:3491628/1‑93 (MQ=255)
ccATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGAttt < 1:3899738/93‑1 (MQ=255)
cATTTGTTCGGCATCTTGCGGCGCTCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc < 1:1800305/93‑1 (MQ=255)
cATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc > 1:6108081/1‑93 (MQ=255)
cATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc > 2:4165861/1‑93 (MQ=255)
cATTGGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTc < 1:3843570/93‑1 (MQ=255)
tttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc > 2:2478609/1‑93 (MQ=255)
tttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc < 2:6472371/93‑1 (MQ=255)
tttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGc < 1:3425722/93‑1 (MQ=255)
ttGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGcc < 2:4741099/93‑1 (MQ=255)
tGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCa > 1:3829682/1‑93 (MQ=255)
tGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCa < 1:3173386/93‑1 (MQ=255)
tCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCa < 1:1903025/93‑1 (MQ=255)
tCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCa < 1:6148746/93‑1 (MQ=255)
tCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCa < 1:2926218/93‑1 (MQ=255)
cGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCaa < 1:3013638/93‑1 (MQ=255)
gCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATa < 1:6054290/93‑1 (MQ=255)
gCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATa < 2:6104969/93‑1 (MQ=255)
gCATCTTGCGGCGCGCCGCGGCGTGCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATa < 2:5015630/93‑1 (MQ=255)
cATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATaa < 2:3382615/93‑1 (MQ=255)
aTCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAg > 1:5317575/1‑93 (MQ=255)
tCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGc < 2:449953/93‑1 (MQ=255)
tCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGc > 2:2266140/1‑93 (MQ=255)
ttGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTc < 1:1430917/93‑1 (MQ=255)
ttGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTc < 1:665522/93‑1 (MQ=255)
cggcgCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGc < 1:1404417/93‑1 (MQ=255)
gcgcgcCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGt < 2:4564187/93‑1 (MQ=255)
cgcgCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTa < 2:487808/93‑1 (MQ=255)
cgcgCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTa < 2:1137810/93‑1 (MQ=255)
|
GTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCGTA > NC_000913/3987456‑3987635
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCG > NC_000913/3987453‑3987633
|
TCCGTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCG > SRR4302537.4053786/1‑94 (MQ=60)
TCCGTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCG < SRR4302537.3432174/94‑1 (MQ=60)
CGTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCC > SRR4302537.2616192/1‑94 (MQ=60)
GTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCG > SRR4302537.3286438/1‑94 (MQ=60)
TTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGC > SRR4302537.3547790/1‑94 (MQ=60)
TTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGC > SRR4302537.4992181/1‑94 (MQ=60)
TATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCG < SRR4302537.620302/94‑1 (MQ=60)
TATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCG > SRR4302537.2147646/1‑94 (MQ=60)
TATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCCTGCGGCGCGCCGCG > SRR4302537.3460978/1‑94 (MQ=60)
ATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGG > SRR4302537.5332731/1‑94 (MQ=60)
AGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCG > SRR4302537.1028134/1‑94 (MQ=60)
AGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCG > SRR4302537.3181764/1‑94 (MQ=60)
ACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTT < SRR4302537.4080732/94‑1 (MQ=60)
ACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTT < SRR4302537.2187821/94‑1 (MQ=60)
ACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTT > SRR4302537.593196/1‑94 (MQ=60)
ACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTT > SRR4302537.4221453/1‑94 (MQ=60)
CTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGACATCCCCATTTGTTCGGCGTCTTGCGTCGCGCCGCGGCGTTC > SRR4302537.5753099/1‑94 (MQ=60)
TTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCA < SRR4302537.3807284/94‑1 (MQ=60)
TTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCA < SRR4302537.468334/94‑1 (MQ=60)
TCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCAC < SRR4302537.5301808/94‑1 (MQ=60)
CAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACC < SRR4302537.1502902/94‑1 (MQ=60)
AGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCG > SRR4302537.1117875/1‑94 (MQ=60)
CGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCG > SRR4302537.4646703/1‑94 (MQ=60)
GAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGA > SRR4302537.6154468/1‑94 (MQ=60)
TGATCTCGCGCGCGCCGGTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAAT < SRR4302537.1438415/94‑1 (MQ=60)
GATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATA > SRR4302537.866096/1‑94 (MQ=60)
ATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAA > SRR4302537.4013058/1‑94 (MQ=60)
ATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAA < SRR4302537.191271/94‑1 (MQ=60)
TCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAAT < SRR4302537.4200318/94‑1 (MQ=60)
TCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAAT > SRR4302537.2900452/1‑94 (MQ=60)
CTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATC > SRR4302537.634223/1‑94 (MQ=60)
CGCGCGCGACGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTG < SRR4302537.5670202/94‑1 (MQ=60)
GCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGC < SRR4302537.5492738/94‑1 (MQ=60)
CGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCG < SRR4302537.2429109/94‑1 (MQ=60)
CGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCG < SRR4302537.1621316/94‑1 (MQ=60)
CGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAA < SRR4302537.3746474/94‑1 (MQ=60)
CGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACC > SRR4302537.6453099/1‑94 (MQ=60)
CCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGT > SRR4302537.4404055/1‑94 (MQ=60)
CGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTC > SRR4302537.2150756/1‑94 (MQ=60)
CGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTC > SRR4302537.4388978/1‑94 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG < SRR4302537.694730/94‑1 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG > SRR4302537.664209/1‑94 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG < SRR4302537.470019/94‑1 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG > SRR4302537.5560794/1‑94 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG > SRR4302537.1129639/1‑94 (MQ=60)
TTATTCAGTAGCTCTTCTGCCAGCGAAACCCCCATTTGTTCGGCATCTTGCGTCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCG < SRR4302537.2032686/94‑1 (MQ=60)
TTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCG < SRR4302537.2008939/94‑1 (MQ=60)
TTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCG > SRR4302537.2182703/1‑94 (MQ=60)
CAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCgcg < SRR4302537.2806923/94‑4 (MQ=60)
CAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCgcg > SRR4302537.6321426/1‑91 (MQ=60)
CAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCgcg > SRR4302537.2592512/1‑91 (MQ=60)
AGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCgcgc > SRR4302537.6116989/1‑90 (MQ=60)
TCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCA < SRR4302537.635144/94‑1 (MQ=60)
TTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGC < SRR4302537.3639400/94‑1 (MQ=60)
TCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCG < SRR4302537.276216/94‑1 (MQ=60)
TCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCG < SRR4302537.3727781/94‑1 (MQ=60)
TCTGCCAGCGAAATCCCCATGTGTCCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCG < SRR4302537.1067366/94‑1 (MQ=60)
CTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGC < SRR4302537.2173904/94‑1 (MQ=60)
CTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGC > SRR4302537.2129714/1‑94 (MQ=60)
CTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGC > SRR4302537.3672416/1‑94 (MQ=60)
CTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGC > SRR4302537.3242611/1‑94 (MQ=60)
CCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACG > SRR4302537.4270810/1‑94 (MQ=60)
CCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACG < SRR4302537.1108852/94‑1 (MQ=60)
CAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGC < SRR4302537.5254099/94‑1 (MQ=60)
CGAAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGC < SRR4302537.1428787/94‑1 (MQ=60)
AAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCA > SRR4302537.6221446/1‑94 (MQ=60)
AAATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCA > SRR4302537.6221447/1‑94 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG < SRR4302537.645948/94‑1 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG > SRR4302537.6288884/1‑94 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG > SRR4302537.3430302/1‑94 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG > SRR4302537.3585884/1‑94 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG < SRR4302537.4271434/94‑1 (MQ=60)
AATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAG < SRR4302537.1140285/94‑1 (MQ=60)
ATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGA > SRR4302537.462401/1‑94 (MQ=60)
ATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGA > SRR4302537.524563/1‑94 (MQ=60)
ATCCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGA > SRR4302537.1434076/1‑94 (MQ=60)
CCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATT > SRR4302537.3516327/1‑94 (MQ=60)
CCCCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATT < SRR4302537.3858586/94‑1 (MQ=60)
CCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTC > SRR4302537.6150055/1‑94 (MQ=60)
CCATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTC < SRR4302537.3927001/94‑1 (MQ=60)
CATTTGTTCGGCATCTTGCGGCGCTCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCG < SRR4302537.1812867/94‑1 (MQ=60)
CATTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCG > SRR4302537.139437/1‑94 (MQ=60)
CATTGGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCG < SRR4302537.3870487/94‑1 (MQ=60)
TTTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCC < SRR4302537.3449970/94‑1 (MQ=60)
TTGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCA > SRR4302537.3856528/1‑94 (MQ=60)
TTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCA > SRR4302537.2927620/1‑94 (MQ=60)
TGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCAT < SRR4302537.3195682/94‑1 (MQ=60)
TGTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCAT < SRR4302537.5136535/94‑1 (MQ=60)
GTTCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATC < SRR4302537.373209/94‑1 (MQ=60)
TCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAA < SRR4302537.2946767/94‑1 (MQ=60)
TCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAA < SRR4302537.1916242/94‑1 (MQ=60)
TCGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAA < SRR4302537.6191036/94‑1 (MQ=60)
CGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAAT < SRR4302537.3034651/94‑1 (MQ=60)
CGGCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAAT > SRR4302537.2962680/1‑94 (MQ=60)
CGGCATCTGGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAAT < SRR4302537.4640386/94‑1 (MQ=60)
GCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAA < SRR4302537.6095876/94‑1 (MQ=60)
GCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAA < SRR4302537.1482027/94‑1 (MQ=60)
GCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAA < SRR4302537.166662/94‑1 (MQ=60)
GCATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAA < SRR4302537.3999036/94‑1 (MQ=60)
CATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAG > SRR4302537.5354084/1‑94 (MQ=60)
CATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAG > SRR4302537.1521384/1‑94 (MQ=60)
ATCTTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGC < SRR4302537.3879303/94‑1 (MQ=60)
TTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCG < SRR4302537.1440879/94‑1 (MQ=60)
TTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCG < SRR4302537.4831673/94‑1 (MQ=60)
TTGCGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCG < SRR4302537.670059/94‑1 (MQ=60)
CGGCGCGCCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCGCGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCG < SRR4302537.1414198/94‑1 (MQ=60)
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TCCGTTATAGACTTCAGCGAGGATCTCGCGCGCGCCGTTATTCAGTAGCTCTTCTGCCAGCGAAATCCCCATTTGTTCGGCATCTTGCGGCGCACCGCGGCGTTCACCGCGAATAATCTGCGAACCGTCCGGCCGGCCGACCAGCGCACGCAGCCAGATTTCGCCATCAATAAGCTCGGCG > NC_000913/3987453‑3987633
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
