Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,990,760 |
T→C |
R665R (CGT→CGC) |
cyaA → |
adenylate cyclase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,990,760 | 0 | T | C | 99.6%
| 788.5
/ NA
| 233 | R665R (CGT→CGC) | cyaA | adenylate cyclase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (120/112); minor base A (1/0); total (121/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 244 total aligned reads displayed.
TAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGT > NC_000913/3990670‑3990849
|
tAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCt > 2:760261/1‑93 (MQ=255)
tAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCt > 2:1109336/1‑93 (MQ=255)
aGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCtt < 1:5027236/93‑1 (MQ=255)
aGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCtt < 2:2188721/93‑1 (MQ=255)
gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCttt > 1:1274082/1‑93 (MQ=255)
gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCttt > 1:5643072/1‑93 (MQ=255)
cGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTc < 1:6099608/93‑1 (MQ=255)
gTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCtttgc > 2:2303422/1‑91 (MQ=255)
gTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTcc < 2:650269/93‑1 (MQ=255)
tGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCa > 1:4410832/1‑93 (MQ=255)
tGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCa > 2:1051076/1‑93 (MQ=255)
gAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGc > 1:3626661/1‑93 (MQ=255)
aaGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCa < 2:3401579/93‑1 (MQ=255)
aaGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCa > 1:3164761/1‑93 (MQ=255)
aGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCAc < 2:1624738/93‑1 (MQ=255)
aGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGAAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCAc > 1:3702555/1‑93 (MQ=255)
gTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCAcc < 2:5474233/93‑1 (MQ=255)
gTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTCCCAGCAcc < 2:6289586/93‑1 (MQ=255)
tcttctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCAccc > 1:2044751/1‑93 (MQ=255)
cttctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCg > 1:5331679/1‑93 (MQ=255)
tctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGcc < 1:5863406/93‑1 (MQ=255)
tctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGcc > 2:1890434/1‑93 (MQ=255)
tctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGcc > 1:719370/1‑93 (MQ=255)
tctGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGcc > 1:1577887/1‑93 (MQ=255)
tGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAg < 1:5055281/93‑1 (MQ=255)
gTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAgg < 2:5833043/93‑1 (MQ=255)
ttATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGa > 1:1384649/1‑93 (MQ=255)
ttATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGa > 1:4072173/1‑93 (MQ=255)
ttATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGa > 1:448433/1‑93 (MQ=255)
tataGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGaa > 1:566506/1‑93 (MQ=255)
ataGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGaaa < 1:4749088/93‑1 (MQ=255)
taGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAAc > 1:932033/1‑93 (MQ=255)
taGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAAc < 2:3557486/93‑1 (MQ=255)
aGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAAcc > 2:5797926/1‑93 (MQ=255)
gCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCg < 2:831452/93‑1 (MQ=255)
gCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCg < 2:3975095/93‑1 (MQ=255)
gCCAGCATCTACGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCg < 1:3218288/93‑1 (MQ=255)
ccAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCgg < 2:6072618/93‑1 (MQ=255)
cAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCggg > 1:6079860/1‑93 (MQ=255)
aGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGc < 2:2720073/93‑1 (MQ=255)
aGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGc > 2:4197393/1‑93 (MQ=255)
cATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGt > 2:3722280/1‑93 (MQ=255)
aTCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGtt > 2:4468849/1‑93 (MQ=255)
tCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGttt > 2:2260300/1‑93 (MQ=255)
tCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGttt > 1:628417/1‑93 (MQ=255)
tGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCa < 1:909583/93‑1 (MQ=255)
gcgcGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCaa < 1:1857076/93‑1 (MQ=255)
gcgcGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCaa < 2:2625933/93‑1 (MQ=255)
cgcgGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAg < 2:5416972/93‑1 (MQ=255)
gcgGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAgg < 2:1438063/93‑1 (MQ=255)
cgGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGgc < 1:3396955/93‑1 (MQ=255)
ggCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGgcg > 1:5156347/1‑93 (MQ=255)
gCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGgcgc > 1:1483126/1‑93 (MQ=255)
cTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCt < 1:6237453/93‑1 (MQ=255)
ttAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTg < 2:4671127/93‑1 (MQ=255)
tAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgc > 2:490636/1‑93 (MQ=255)
aTTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgcgc > 2:6424831/1‑93 (MQ=255)
cGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGtt < 1:4954542/93‑1 (MQ=255)
tACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGGGTTTCAAGGGCCTGCGTGttct > 2:2122534/1‑91 (MQ=255)
tACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTc < 1:4625170/93‑1 (MQ=255)
aCTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCt < 1:5785234/93‑1 (MQ=255)
aCTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCt < 2:1249280/93‑1 (MQ=255)
cTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg < 1:5390396/93‑1 (MQ=255)
cTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg > 2:3267755/1‑93 (MQ=255)
tCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTgg > 1:6311192/1‑93 (MQ=255)
gcagcaACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAc > 1:777745/1‑93 (MQ=255)
gcagcaACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAc > 1:1011224/1‑93 (MQ=255)
gcagcaACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAc > 1:3863857/1‑93 (MQ=255)
cagcaACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAcc < 1:5451669/93‑1 (MQ=255)
gcaACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTg < 2:2549419/93‑1 (MQ=255)
aCTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg > 1:1306419/1‑93 (MQ=255)
aCTGGTGTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg < 1:1927225/93‑1 (MQ=255)
tGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCCCCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt < 1:2343420/93‑1 (MQ=255)
tGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt > 1:1218193/1‑93 (MQ=255)
tGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt > 1:4923577/1‑93 (MQ=255)
ggTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgtt > 1:1178406/1‑93 (MQ=255)
ggTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgtt < 2:4453707/93‑1 (MQ=255)
gTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttg > 2:4602817/1‑93 (MQ=255)
gTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGggtg > 1:2861459/1‑93 (MQ=255)
tttCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttgt > 1:3322688/1‑93 (MQ=255)
ttCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttgtt > 2:4102682/1‑93 (MQ=255)
ttCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttgtt < 1:1794629/93‑1 (MQ=255)
cTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttct < 1:4952965/93‑1 (MQ=255)
tGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttctt > 1:3797401/1‑93 (MQ=255)
tGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttctt > 1:1638989/1‑93 (MQ=255)
tGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttctt > 2:5146346/1‑93 (MQ=255)
tGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGGTGttctt > 2:2411499/1‑93 (MQ=255)
gAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttcttc < 2:5528667/93‑1 (MQ=255)
aGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCg > 1:1607567/1‑93 (MQ=255)
gtATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAAc < 2:306734/93‑1 (MQ=255)
gtATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAAc > 2:4318114/1‑93 (MQ=255)
tATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACg < 2:6131238/93‑1 (MQ=255)
tATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGATTCAAGGCGCTGCCAGTTTCTGGTCAAACCTGGGGGCTGCTCTTCGAAcc > 1:2923965/1‑92 (MQ=255)
ttGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGcc < 2:3705860/93‑1 (MQ=255)
gAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTg > 2:3839810/1‑93 (MQ=255)
aaTTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGa > 1:2185148/1‑93 (MQ=255)
aaTTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGa > 2:5311443/1‑93 (MQ=255)
aTTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGaa < 1:2648705/93‑1 (MQ=255)
tGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATg < 2:700704/93‑1 (MQ=255)
gcgcCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGt > 1:5867813/1‑93 (MQ=255)
|
TAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGT > NC_000913/3990670‑3990849
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATC > NC_000913/3990667‑3990852
|
AGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGC > SRR4302537.6096397/1‑94 (MQ=60)
GATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCC > SRR4302537.3207903/1‑94 (MQ=60)
ATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCT > SRR4302537.2982913/1‑94 (MQ=60)
AGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTT > SRR4302537.1282942/1‑94 (MQ=60)
AGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTT < SRR4302537.5061853/94‑1 (MQ=60)
AGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTT < SRR4302537.5070986/94‑1 (MQ=60)
AGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTT > SRR4302537.5681690/1‑94 (MQ=60)
CGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCC < SRR4302537.2752165/94‑1 (MQ=60)
CGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCC < SRR4302537.6141522/94‑1 (MQ=60)
CGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCC > SRR4302537.4715641/1‑94 (MQ=60)
CGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCC < SRR4302537.5119765/94‑1 (MQ=60)
GTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCA > SRR4302537.4441268/1‑94 (MQ=60)
TGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAG < SRR4302537.1331369/94‑1 (MQ=60)
GGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGC > SRR4302537.2587463/1‑94 (MQ=60)
GGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGC > SRR4302537.3652226/1‑94 (MQ=60)
GGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGC > SRR4302537.922873/1‑94 (MQ=60)
GAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCA < SRR4302537.5267683/94‑1 (MQ=60)
GAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCA > SRR4302537.5557764/1‑94 (MQ=60)
GAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCA > SRR4302537.3186984/1‑94 (MQ=60)
AAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGAAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCAC > SRR4302537.3728598/1‑94 (MQ=60)
AGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACC < SRR4302537.1606719/94‑1 (MQ=60)
AGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACC < SRR4302537.6308626/94‑1 (MQ=60)
GTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCC > SRR4302537.2059076/1‑94 (MQ=60)
TCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCG > SRR4302537.5368253/1‑94 (MQ=60)
TTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCC > SRR4302537.1588893/1‑94 (MQ=60)
TTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCC > SRR4302537.724285/1‑94 (MQ=60)
TCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCA < SRR4302537.5903621/94‑1 (MQ=60)
CTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAG > SRR4302537.3253899/1‑94 (MQ=60)
TGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGG < SRR4302537.6186669/94‑1 (MQ=60)
TGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGG < SRR4302537.5090083/94‑1 (MQ=60)
GTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGA > SRR4302537.4100609/1‑94 (MQ=60)
GTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGA > SRR4302537.451542/1‑94 (MQ=60)
GTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGA > SRR4302537.1394307/1‑94 (MQ=60)
TTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAA > SRR4302537.570399/1‑94 (MQ=60)
TATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCATTTACCGCACCCGCCAGGAAA > SRR4302537.5021352/1‑94 (MQ=60)
TATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATCGAATTGCGCCTTTCCAGCACCCGCCAGGAAA > SRR4302537.3404330/1‑94 (MQ=60)
ATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAAC < SRR4302537.4781893/94‑1 (MQ=60)
ATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAAC > SRR4302537.938459/1‑94 (MQ=60)
TAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACC < SRR4302537.4231605/94‑1 (MQ=60)
TAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACC < SRR4302537.1733850/94‑1 (MQ=60)
AGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGACAGGAAACCG > SRR4302537.1993260/1‑94 (MQ=60)
GCCAGCATCTACGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGG < SRR4302537.3240932/94‑1 (MQ=60)
CCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGG > SRR4302537.6121640/1‑94 (MQ=60)
CCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGG > SRR4302537.5819340/1‑94 (MQ=60)
CAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGTGC > SRR4302537.804733/1‑94 (MQ=60)
CAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGC < SRR4302537.2585853/94‑1 (MQ=60)
AGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCG > SRR4302537.6185366/1‑94 (MQ=60)
AGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCG < SRR4302537.5544453/94‑1 (MQ=60)
ATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTT < SRR4302537.4397040/94‑1 (MQ=60)
ATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTT > SRR4302537.632697/1‑94 (MQ=60)
TCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTC < SRR4302537.6337094/94‑1 (MQ=60)
CTGCGCGTCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCA < SRR4302537.5693477/94‑1 (MQ=60)
CTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCA < SRR4302537.1206317/94‑1 (MQ=60)
CTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCA > SRR4302537.5438393/1‑94 (MQ=60)
TGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAA < SRR4302537.915863/94‑1 (MQ=60)
GCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAG < SRR4302537.1870010/94‑1 (MQ=60)
CGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGG > SRR4302537.1328927/1‑94 (MQ=60)
GCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGC < SRR4302537.3808588/94‑1 (MQ=60)
CGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCG < SRR4302537.3421014/94‑1 (MQ=60)
CGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCG > SRR4302537.5191879/1‑94 (MQ=60)
CGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCG > SRR4302537.2894266/1‑94 (MQ=60)
GGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGC > SRR4302537.1493440/1‑94 (MQ=60)
GGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGC > SRR4302537.3726054/1‑94 (MQ=60)
GGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGC > SRR4302537.5879422/1‑94 (MQ=60)
GGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGC > SRR4302537.3228177/1‑94 (MQ=60)
GCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCT < SRR4302537.635098/94‑1 (MQ=60)
GCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCT < SRR4302537.1291858/94‑1 (MQ=60)
CTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTG > SRR4302537.5011677/1‑94 (MQ=60)
CTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTG < SRR4302537.6280342/94‑1 (MQ=60)
ATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCG < SRR4302537.5904350/94‑1 (MQ=60)
TCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTT < SRR4302537.3942129/94‑1 (MQ=60)
CGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTT > SRR4302537.4987497/1‑94 (MQ=60)
CGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTT < SRR4302537.4988706/94‑1 (MQ=60)
GTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTC > SRR4302537.4474054/1‑94 (MQ=60)
GTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTC > SRR4302537.6133141/1‑94 (MQ=60)
GTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTC > SRR4302537.1830648/1‑94 (MQ=60)
TACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCT < SRR4302537.4657175/94‑1 (MQ=60)
ACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTG < SRR4302537.5824901/94‑1 (MQ=60)
ACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTG > SRR4302537.762547/1‑94 (MQ=60)
CTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGG > SRR4302537.6354397/1‑94 (MQ=60)
CTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGG < SRR4302537.5427222/94‑1 (MQ=60)
CTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGG > SRR4302537.4897378/1‑94 (MQ=60)
CGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGACTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTC > SRR4302537.1805569/1‑94 (MQ=60)
CGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAA > SRR4302537.3777945/1‑94 (MQ=60)
TGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAC > SRR4302537.1018193/1‑94 (MQ=60)
TGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAC > SRR4302537.3890906/1‑94 (MQ=60)
TGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAC > SRR4302537.3454458/1‑94 (MQ=60)
TGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAC > SRR4302537.783083/1‑94 (MQ=60)
GCAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACC > SRR4302537.2232996/1‑94 (MQ=60)
CAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCT < SRR4302537.3262963/94‑1 (MQ=60)
CAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCT < SRR4302537.5488854/94‑1 (MQ=60)
CAGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGCTTCAAGGCGCTGCGCGTTTCTGGTTAAACCT > SRR4302537.1583304/1‑94 (MQ=60)
AGCAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTG > SRR4302537.4875574/1‑94 (MQ=60)
CAACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGG < SRR4302537.3051392/94‑1 (MQ=60)
AACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGG < SRR4302537.4606522/94‑1 (MQ=60)
AACTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGG > SRR4302537.1315514/1‑94 (MQ=60)
ACTGGTGTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGG < SRR4302537.1940599/94‑1 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT < SRR4302537.2135508/94‑1 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT > SRR4302537.4957530/1‑94 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT > SRR4302537.355865/1‑94 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT > SRR4302537.1226664/1‑94 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT < SRR4302537.3858450/94‑1 (MQ=60)
CTGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGT > SRR4302537.5946051/1‑94 (MQ=60)
TGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCCCCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTT < SRR4302537.2359926/94‑1 (MQ=60)
TGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTT < SRR4302537.1226956/94‑1 (MQ=60)
TGGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTT > SRR4302537.1186599/1‑94 (MQ=60)
GGTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGGTG > SRR4302537.2881524/1‑94 (MQ=60)
GTTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGT > SRR4302537.3346194/1‑94 (MQ=60)
TTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTT < SRR4302537.1058327/94‑1 (MQ=60)
TTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTT < SRR4302537.518937/94‑1 (MQ=60)
TTTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTT < SRR4302537.1918698/94‑1 (MQ=60)
TTCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTC < SRR4302537.1807151/94‑1 (MQ=60)
TCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCT < SRR4302537.1626506/94‑1 (MQ=60)
TCTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCT < SRR4302537.6099439/94‑1 (MQ=60)
CTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTT > SRR4302537.1650471/1‑94 (MQ=60)
CTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTT < SRR4302537.4987120/94‑1 (MQ=60)
CTGAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTT > SRR4302537.3824039/1‑94 (MQ=60)
GAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCG > SRR4302537.1618808/1‑94 (MQ=60)
GAGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCG > SRR4302537.1427379/1‑94 (MQ=60)
AGTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGA > SRR4302537.6441524/1‑94 (MQ=60)
GTGTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAA < SRR4302537.905304/94‑1 (MQ=60)
GTATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGATTCAAGGCGCTGCCAGTTTCTGGTCAAACCTGGGGGCTGCTCTTCGAACC > SRR4302537.2944504/1‑94 (MQ=60)
ATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCC > SRR4302537.2145781/1‑94 (MQ=60)
ATTGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCC < SRR4302537.1579316/94‑1 (MQ=60)
TGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTG > SRR4302537.4643184/1‑94 (MQ=60)
TGAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTG > SRR4302537.4978772/1‑94 (MQ=60)
GAATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGA > SRR4302537.2200546/1‑94 (MQ=60)
AATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAA > SRR4302537.588934/1‑94 (MQ=60)
ATTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAAT < SRR4302537.2667231/94‑1 (MQ=60)
TTGCGCCTTTCCAGCCCCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATG < SRR4302537.5394506/94‑1 (MQ=60)
TTGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATG > SRR4302537.5401671/1‑94 (MQ=60)
TGCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGT > SRR4302537.5908068/1‑94 (MQ=60)
GCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTA < SRR4302537.1903572/94‑1 (MQ=60)
GCGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTA < SRR4302537.1276475/94‑1 (MQ=60)
CGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTAT > SRR4302537.690926/1‑94 (MQ=60)
CGCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTAT < SRR4302537.6033756/94‑1 (MQ=60)
GCCTTTCCAGCACCCGCCAGGAAGCCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATC < SRR4302537.3564519/94‑1 (MQ=60)
GCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCGTGAATGTATC > SRR4302537.4610872/1‑94 (MQ=60)
GCCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATC > SRR4302537.3662158/1‑94 (MQ=60)
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AGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATC > NC_000913/3990667‑3990852
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
