Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,064,911 |
A→G |
V649A (GTT→GCT) |
yihQ ← |
putative glycosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,064,911 | 0 | A | G | 94.7%
| 620.2
/ 15.9
| 207 | V649A (GTT→GCT) | yihQ | putative glycosidase |
| Reads supporting (aligned to +/- strand): ref base A (7/4); new base G (99/97); total (106/101) |
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 |
Only 100 of 219 total aligned reads displayed.
TTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCA > NC_000913/4064820‑4065000
|
ttAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAAc > 1:5273809/1‑93 (MQ=255)
tAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCt > 2:500614/1‑93 (MQ=255)
aTGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTcc < 1:6250215/93‑1 (MQ=255)
tGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccc < 2:5402607/93‑1 (MQ=255)
tGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccc < 2:1883788/93‑1 (MQ=255)
tGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTccc > 1:4215563/1‑93 (MQ=255)
gCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTcccc > 2:4580528/1‑93 (MQ=255)
tttttAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCCTTAACGGTAGCTTccccgc > 1:4168209/1‑93 (MQ=255)
tttttAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccccgc < 1:2033456/93‑1 (MQ=255)
ttttAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccccgcc < 2:2874106/93‑1 (MQ=255)
ttttAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccccgcc < 2:767931/93‑1 (MQ=255)
ttAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTccccgcccc > 1:1018834/1‑93 (MQ=255)
tAACGACGCGAACAGTTCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCCTcccccccccg > 2:3620010/1‑93 (MQ=255)
acgacgCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGa > 2:4120444/1‑93 (MQ=255)
cgacgCGAACAGTGCCCCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGaa < 2:2378448/93‑1 (MQ=255)
gacgCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAAc > 1:3711478/1‑93 (MQ=255)
cgcgAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGc < 2:1787941/93‑1 (MQ=255)
cgAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCtt < 2:1244011/93‑1 (MQ=255)
gAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTc > 1:5303929/1‑93 (MQ=255)
aaCAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCa < 2:5069072/93‑1 (MQ=255)
aCAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAc > 1:5404120/1‑93 (MQ=255)
aCAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAc > 1:4287372/1‑93 (MQ=255)
aCAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAc > 1:1759211/1‑93 (MQ=255)
aGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAccc < 1:3639706/93‑1 (MQ=255)
aGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAccc < 2:3725634/93‑1 (MQ=255)
gTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCCTTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCg > 1:5004420/1‑93 (MQ=255)
gccgccCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTc > 2:465976/1‑93 (MQ=255)
cgccCATTCGCTATCGGCGCGATAAAAGACCGGTGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTccc > 1:3404909/1‑92 (MQ=255)
cgccCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCa > 1:1881228/1‑93 (MQ=255)
cgccCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCa < 1:324163/93‑1 (MQ=255)
gccCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTTCCCGCCCCGGAACGCTTCACCCGTCCAg > 2:3883888/1‑93 (MQ=255)
gccCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAg < 1:2269208/93‑1 (MQ=255)
cccATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAgg > 1:375596/1‑93 (MQ=255)
cccATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAgg > 1:4351955/1‑93 (MQ=255)
cATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCg > 2:502868/1‑93 (MQ=255)
cATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCg > 1:3090669/1‑93 (MQ=255)
aTTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGt < 1:4383000/93‑1 (MQ=255)
ttCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTg > 1:4911831/1‑93 (MQ=255)
ttCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTg > 2:3211734/1‑93 (MQ=255)
ttCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTg < 1:1955301/93‑1 (MQ=255)
tCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTgg < 2:3491336/93‑1 (MQ=255)
tCGCTATCGGCGCGAGAAAAGCCCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTgg < 1:24903/93‑1 (MQ=255)
aTCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCa < 1:5916543/93‑1 (MQ=255)
ggCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGtt > 2:5731265/1‑93 (MQ=255)
ggCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGtt > 1:5124661/1‑93 (MQ=255)
ggCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCCGAACGCTTCACCCGTCCAGGCGTGGACCCAGtt > 1:3944565/1‑93 (MQ=255)
ggCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGtt > 1:3823131/1‑93 (MQ=255)
gcgcGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTa < 1:5853150/93‑1 (MQ=255)
gcgcGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTa < 2:6348895/93‑1 (MQ=255)
gcgATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTAtc > 1:1549069/1‑93 (MQ=255)
gATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTAtccc > 1:4420715/1‑92 (MQ=255)
tAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTAtcctcc < 1:1134679/93‑1 (MQ=255)
aaaGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCgg < 2:1646823/93‑1 (MQ=255)
aaGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGc < 1:4081828/93‑1 (MQ=255)
aaGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGc > 2:1690126/1‑93 (MQ=255)
aGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCa > 2:2803098/1‑93 (MQ=255)
gACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAg > 1:6434894/1‑93 (MQ=255)
gccGGCGGCTTGCCGATGCGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGa < 1:1813818/92‑1 (MQ=255)
aCCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTTCCCGCCCCGGCACGCTTCACCCCTCCAGGCGTCGAGCCAGTTATCCTCCggacga > 2:291698/1‑89 (MQ=255)
cggcggCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATa < 2:6415275/93‑1 (MQ=255)
gcggcTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATaga < 2:4868673/93‑1 (MQ=255)
cggcTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATagag < 1:3472001/93‑1 (MQ=255)
cggcTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATagag < 2:3350832/93‑1 (MQ=255)
cTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGCTATCATCCGGCAGATAGAGCGt > 2:555768/1‑93 (MQ=255)
tttccGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTc < 2:5491127/90‑1 (MQ=255)
ttGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTc > 2:5290118/1‑93 (MQ=255)
tGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTcc < 2:1120025/93‑1 (MQ=255)
gCCGATGGTCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGTTCCAGTTATCCTCCGGCAGATAGAGCGTCCa > 2:2006524/1‑93 (MQ=255)
gCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCa > 1:5819236/1‑93 (MQ=255)
ccGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAg > 1:5572947/1‑93 (MQ=255)
ccGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAg > 1:2827517/1‑93 (MQ=255)
cGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGt > 1:607294/1‑93 (MQ=255)
cGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGt < 1:2898217/93‑1 (MQ=255)
cGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGt < 1:905109/93‑1 (MQ=255)
gATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTc > 1:733353/1‑93 (MQ=255)
gATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTc < 2:5573600/93‑1 (MQ=255)
aTGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTTCGGCAGATAGAGCGTCCAGGCg > 2:5921135/1‑93 (MQ=255)
aTGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCg < 2:5876077/93‑1 (MQ=255)
aTGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCg > 1:8581/1‑93 (MQ=255)
tGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGc < 2:2084811/93‑1 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc < 2:3682447/93‑1 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc > 1:2758075/1‑93 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc < 1:3003346/93‑1 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc < 1:2114403/93‑1 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc > 2:935754/1‑93 (MQ=255)
gcgcATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAc < 2:2519511/93‑1 (MQ=255)
cATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGc < 2:1473226/93‑1 (MQ=255)
cATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGc > 2:3376358/1‑93 (MQ=255)
aTTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGcc > 1:1337107/1‑93 (MQ=255)
ttAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCct > 1:4852500/1‑93 (MQ=255)
ttAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCct > 2:4487508/1‑93 (MQ=255)
tAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCctt < 2:4481031/93‑1 (MQ=255)
aaCGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCcttc < 2:952790/93‑1 (MQ=255)
aaCGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCcttc > 2:3995686/1‑93 (MQ=255)
aCGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCcttct < 2:2993736/93‑1 (MQ=255)
ggTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCttcttc < 1:1469676/93‑1 (MQ=255)
gTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCa < 1:2623919/93‑1 (MQ=255)
gTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCa < 1:4161388/93‑1 (MQ=255)
gTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCa > 1:4379194/1‑93 (MQ=255)
gTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCa > 2:2304260/1‑93 (MQ=255)
|
TTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCA > NC_000913/4064820‑4065000
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCATGCA > NC_000913/4064818‑4065004
|
GATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAG < SRR4302537.581371/94‑1 (MQ=60)
ATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGC < SRR4302537.4173926/94‑1 (MQ=60)
ATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGC > SRR4302537.879504/1‑94 (MQ=60)
ATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGC < SRR4302537.2927653/94‑1 (MQ=60)
ATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAAC > SRR4302537.5310100/1‑94 (MQ=60)
TTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCT > SRR4302537.4041628/1‑94 (MQ=60)
GATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCC < SRR4302537.6105739/94‑1 (MQ=60)
GATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCC < SRR4302537.2088942/94‑1 (MQ=60)
ATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCC < SRR4302537.6293152/94‑1 (MQ=60)
ATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCC > SRR4302537.4244950/1‑94 (MQ=60)
ATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCC > SRR4302537.1324628/1‑94 (MQ=60)
TGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCC > SRR4302537.5528676/1‑94 (MQ=60)
GCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCG > SRR4302537.4410315/1‑94 (MQ=60)
CTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCCTTAACGGTAGCTTCCCCGC > SRR4302537.4197323/1‑94 (MQ=60)
CTTTTTAACGACGCGAACAGGGCCGCCCATTCGCTATCAGCGCGATAAAAGACCGGCGGCTTGTCGATGGGCGCATTAAAGGTAGCTTCGCCGC > SRR4302537.5271829/1‑94 (MQ=60)
TTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCC < SRR4302537.2047629/94‑1 (MQ=60)
TTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCAC < SRR4302537.4248259/94‑1 (MQ=60)
TATTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCC < SRR4302537.2541612/94‑1 (MQ=60)
TTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCC > SRR4302537.1025856/1‑94 (MQ=60)
ACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAA > SRR4302537.6216295/1‑94 (MQ=60)
CGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAAC > SRR4302537.3737565/1‑94 (MQ=60)
GACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCGCCGCCCCGGAACC > SRR4302537.3715278/1‑94 (MQ=60)
GACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACG > SRR4302537.2876642/1‑94 (MQ=60)
GACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACG < SRR4302537.1569513/94‑1 (MQ=60)
CGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCT < SRR4302537.5322852/94‑1 (MQ=60)
GCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTT > SRR4302537.3593963/1‑94 (MQ=60)
CGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTC > SRR4302537.5340385/1‑94 (MQ=60)
GAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCA < SRR4302537.5511662/94‑1 (MQ=60)
AACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAC > SRR4302537.4317172/1‑94 (MQ=60)
AACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAC > SRR4302537.5440991/1‑94 (MQ=60)
AACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAC < SRR4302537.968181/94‑1 (MQ=60)
AACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCAC > SRR4302537.1771473/1‑94 (MQ=60)
AACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCCGCACGCTTTAC > SRR4302537.3848049/1‑94 (MQ=60)
ACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTTCCCGCCCCGGAACGCTTCACC > SRR4302537.543731/1‑94 (MQ=60)
AGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCCTTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCG > SRR4302537.5038888/1‑94 (MQ=60)
AGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCG > SRR4302537.6387179/1‑94 (MQ=60)
AGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCG < SRR4302537.3665338/94‑1 (MQ=60)
TGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTC > SRR4302537.6282559/1‑94 (MQ=60)
CCGCCCATTCGCTATCGGCGCGATAAAAGACCGGTGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCC > SRR4302537.3429025/1‑94 (MQ=60)
CCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCA > SRR4302537.388101/1‑94 (MQ=60)
CCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCA > SRR4302537.1894311/1‑94 (MQ=60)
CGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAG < SRR4302537.326411/94‑1 (MQ=60)
CGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAG > SRR4302537.4900596/1‑94 (MQ=60)
CGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAG > SRR4302537.5294406/1‑94 (MQ=60)
GCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGG > SRR4302537.4382098/1‑94 (MQ=60)
GCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGG > SRR4302537.378205/1‑94 (MQ=60)
GCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGG < SRR4302537.4850707/94‑1 (MQ=60)
GCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGG < SRR4302537.2285236/94‑1 (MQ=60)
CCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCG > SRR4302537.3112225/1‑94 (MQ=60)
CATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGT > SRR4302537.3041397/1‑94 (MQ=60)
ATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTG < SRR4302537.4413248/94‑1 (MQ=60)
ATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTG < SRR4302537.4920006/94‑1 (MQ=60)
ATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTG > SRR4302537.4945733/1‑94 (MQ=60)
TTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGG < SRR4302537.1968899/94‑1 (MQ=60)
TCGCTATCGGCGCGAGAAAAGCCCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGA < SRR4302537.25100/94‑1 (MQ=60)
CGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGAC < SRR4302537.1111125/94‑1 (MQ=60)
GCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACC > SRR4302537.184245/1‑94 (MQ=60)
GCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACC > SRR4302537.2791746/1‑94 (MQ=60)
GCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGAATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACC < SRR4302537.352469/94‑1 (MQ=60)
CTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCC < SRR4302537.3848201/94‑1 (MQ=60)
CTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCC > SRR4302537.2737010/1‑94 (MQ=60)
TATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCA < SRR4302537.849449/94‑1 (MQ=60)
TATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCA > SRR4302537.4356746/1‑94 (MQ=60)
ATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAG < SRR4302537.5957139/94‑1 (MQ=60)
CGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTT > SRR4302537.5159977/1‑94 (MQ=60)
CGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTT < SRR4302537.1349305/94‑1 (MQ=60)
CGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCCGAACGCTTCACCCGTCCAGGCGTGGACCCAGTT > SRR4302537.3972154/1‑94 (MQ=60)
CGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTT > SRR4302537.3849936/1‑94 (MQ=60)
GCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTAT < SRR4302537.5893305/94‑1 (MQ=60)
GCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCAAGTTAT < SRR4302537.4980240/94‑1 (MQ=60)
CGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATC > SRR4302537.4206589/1‑94 (MQ=60)
CGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATC > SRR4302537.1559879/1‑94 (MQ=60)
CGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCC > SRR4302537.4451235/1‑94 (MQ=60)
GATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTC < SRR4302537.4063786/94‑1 (MQ=60)
GATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTC < SRR4302537.5054462/94‑1 (MQ=60)
ATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCC > SRR4302537.3752211/1‑94 (MQ=60)
TAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCG < SRR4302537.1142562/94‑1 (MQ=60)
TAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCG > SRR4302537.2912134/1‑94 (MQ=60)
TAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCG < SRR4302537.2340996/94‑1 (MQ=60)
AAAAAGGCCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCG < SRR4302537.2783804/94‑1 (MQ=60)
AAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCA < SRR4302537.4110325/94‑1 (MQ=60)
AGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAG > SRR4302537.6478589/1‑94 (MQ=60)
GCCGGCGGCTTGCCGATGCGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGAT < SRR4302537.1826462/94‑1 (MQ=60)
CGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGC > SRR4302537.2195275/1‑94 (MQ=60)
CGGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGC < SRR4302537.3496571/94‑1 (MQ=60)
GGCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCG > SRR4302537.2272401/1‑94 (MQ=60)
GCTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGT < SRR4302537.1535996/94‑1 (MQ=60)
CTTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTC > SRR4302537.3316178/1‑94 (MQ=60)
TTGCCGATGGGCGCATTATCGATAGCTGCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCC < SRR4302537.5872407/94‑1 (MQ=60)
TTGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCC < SRR4302537.1812290/94‑1 (MQ=60)
TGCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCA > SRR4302537.5859118/1‑94 (MQ=60)
GCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAG > SRR4302537.2847277/1‑94 (MQ=60)
GCCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAG > SRR4302537.5611038/1‑94 (MQ=60)
CCGATTGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGT > SRR4302537.1821611/1‑94 (MQ=60)
CCGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGT > SRR4302537.611443/1‑94 (MQ=60)
CGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTC < SRR4302537.911355/94‑1 (MQ=60)
CGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTC < SRR4302537.2918582/94‑1 (MQ=60)
CGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTC < SRR4302537.4191915/94‑1 (MQ=60)
CGATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTC > SRR4302537.738357/1‑94 (MQ=60)
GATGGGCGCATTACCGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCG < SRR4302537.3472667/94‑1 (MQ=60)
GATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCG > SRR4302537.3190333/1‑94 (MQ=60)
GATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCG > SRR4302537.8640/1‑94 (MQ=60)
ATGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGC < SRR4302537.3005043/94‑1 (MQ=60)
TGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCT < SRR4302537.898413/94‑1 (MQ=60)
TGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCT < SRR4302537.1987616/94‑1 (MQ=60)
TGGGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCT < SRR4302537.5615257/94‑1 (MQ=60)
GGCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTAC > SRR4302537.2777328/1‑94 (MQ=60)
GCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACG < SRR4302537.3024266/94‑1 (MQ=60)
GCGCATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACG < SRR4302537.2129304/94‑1 (MQ=60)
GCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACG < SRR4302537.658738/94‑1 (MQ=60)
CATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCC > SRR4302537.1346421/1‑94 (MQ=60)
ATTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCT > SRR4302537.4885977/1‑94 (MQ=60)
TTAACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTT > SRR4302537.5895265/1‑94 (MQ=60)
AACGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCT < SRR4302537.1900842/94‑1 (MQ=60)
CGGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTC > SRR4302537.4149203/1‑94 (MQ=60)
CGGTAGCTCCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTC < SRR4302537.4431938/94‑1 (MQ=60)
GGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCA < SRR4302537.1479894/94‑1 (MQ=60)
GGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCA > SRR4302537.4409422/1‑94 (MQ=60)
GGTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCA > SRR4302537.4409276/1‑94 (MQ=60)
GTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCAT < SRR4302537.2642309/94‑1 (MQ=60)
GTAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCAT < SRR4302537.4190450/94‑1 (MQ=60)
TAGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCATG < SRR4302537.1477052/94‑1 (MQ=60)
AGCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCATGC > SRR4302537.5662540/1‑94 (MQ=60)
GCTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCATGCA > SRR4302537.4165237/1‑94 (MQ=60)
|
GATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTCACCCGTCCAGGCGTGGACCCAGTTATCCTCCGGCAGATAGAGCGTCCAGTCGCTACGGCCTTCTTCATGCA > NC_000913/4064818‑4065004
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
