Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A1 F1 I2 R1 | 882 | 254.4 | 12957588 | 98.0% | 12698436 | 93.0 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,083,016 | C→T | A129A (GCG→GCA) A129A (GCG→GCA) |
fdoG ← b4557 ← |
formate dehydrogenase‑O, major subunit hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,083,016 | 0 | C | T | 100.0% | 879.8 / NA | 247 | A129A (GCG→GCA) A129A (GCG→GCA) | fdoG b4557 | formate dehydrogenase‑O, major subunit hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (134/113); total (134/113) | |||||||||||
Only 100 of 249 total aligned reads displayed.
GAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAACGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATC > NC_000913/4082926‑4083105 | gagCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGc > 1:3471239/1‑93 (MQ=255)gagCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGc < 2:5751601/93‑1 (MQ=255)gagCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGc > 2:938069/1‑93 (MQ=255) gCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCct < 1:6283989/93‑1 (MQ=255) gCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCct > 2:5842730/1‑93 (MQ=255) ccAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCctc < 1:4854874/93‑1 (MQ=255) ccAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCctc < 2:144153/93‑1 (MQ=255) cAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCctct > 2:3806153/1‑93 (MQ=255) cAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCctct < 2:5510024/93‑1 (MQ=255) aGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCtt > 1:2033769/1‑93 (MQ=255) aGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCtt < 1:2236284/93‑1 (MQ=255) ggTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTccc > 2:3385563/1‑93 (MQ=255) ggTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTccc > 1:2801670/1‑93 (MQ=255) ggTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTccc < 2:2338197/93‑1 (MQ=255) gTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCa > 2:345881/1‑93 (MQ=255) gTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCa > 1:1464879/1‑93 (MQ=255) ttAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCac > 1:1980571/1‑92 (MQ=255) ttAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCaa < 1:1342729/93‑1 (MQ=255) ttAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCaa > 2:3554503/1‑93 (MQ=255) aCAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTTGCGATGCGATCAAATGCCTCTTCCCAACTg > 1:419642/1‑93 (MQ=255) aCAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTg > 2:3185303/1‑93 (MQ=255) cAGTCACGACTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGa > 2:6295772/1‑93 (MQ=255) aGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGAt > 2:1797231/1‑93 (MQ=255) gTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGAtt > 2:5500350/1‑93 (MQ=255) gTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGAtt > 1:477949/1‑93 (MQ=255) gTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGAtt > 2:5631272/1‑93 (MQ=255) tCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGAttt < 2:3256277/93‑1 (MQ=255) cACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTtg < 2:1426582/93‑1 (MQ=255) aCGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTtgc > 2:2844901/1‑93 (MQ=255) gCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTtgctg > 2:2534296/1‑93 (MQ=255) ccTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTtgctgc < 1:2543366/93‑1 (MQ=255) ccTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTtgctgc > 1:5352569/1‑93 (MQ=255) cTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGcc < 2:4203583/93‑1 (MQ=255) cTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGcc > 2:4113443/1‑93 (MQ=255) tCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCAt < 2:6093500/93‑1 (MQ=255) ggCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCAttt > 2:2421994/1‑93 (MQ=255) gCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATAAAATGCCTCTTCCCAACTGATTTGCTGCCATTTa < 1:1031683/93‑1 (MQ=255) cGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTAt < 1:212357/93‑1 (MQ=255) gTTTTGCGCAATGTAGTTAGCATCGCGGTCTTC‑TTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCa < 1:5774681/93‑1 (MQ=255) ttttGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCa > 2:1740256/1‑93 (MQ=255) ttttGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCa < 1:1737773/93‑1 (MQ=255) tGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGaa < 2:5326012/93‑1 (MQ=255) cgcAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAAcc < 1:3696470/93‑1 (MQ=255) gcAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCt > 2:5133981/1‑93 (MQ=255) gcAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCt > 1:2758050/1‑93 (MQ=255) gaaTGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTg < 1:4639561/92‑1 (MQ=255) aaTGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTgg < 1:4334301/93‑1 (MQ=255) aTGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGgc > 2:6432595/1‑93 (MQ=255) tGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGgcg > 1:5445952/1‑93 (MQ=255) tGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGgcg > 2:2904251/1‑93 (MQ=255) tAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCa < 2:2642242/93‑1 (MQ=255) tAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCa < 1:820472/93‑1 (MQ=255) gTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACg > 1:1681609/1‑93 (MQ=255) gTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACg < 1:3272832/93‑1 (MQ=255) tAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGt < 1:4247132/93‑1 (MQ=255) gCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTAt > 2:195726/1‑93 (MQ=255) gCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTAt > 1:2501939/1‑93 (MQ=255) gCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTAt > 2:3830923/1‑93 (MQ=255) aTCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTc < 2:2555074/93‑1 (MQ=255) aTCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTc < 2:1314895/93‑1 (MQ=255) tCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTcc > 1:3750939/1‑93 (MQ=255) tCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTcc > 1:3733435/1‑93 (MQ=255) gcgGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCgg > 1:868791/1‑93 (MQ=255) gcgGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCgg > 1:5966089/1‑93 (MQ=255) cgGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGa > 2:987831/1‑93 (MQ=255) cgGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGa < 1:644742/93‑1 (MQ=255) cgGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGa > 1:3017104/1‑93 (MQ=255) ggTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGaa < 1:2452191/93‑1 (MQ=255) gTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGaaa > 1:5173172/1‑93 (MQ=255) tcttctTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAAc > 1:6198577/1‑93 (MQ=255) ttcttTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCGGAACCTGGCGCACGGTATTCCGGAAACtt > 2:6355745/1‑93 (MQ=255) ttcttTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACtt > 2:4850645/1‑93 (MQ=255) ttcttTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACtt < 1:3856476/93‑1 (MQ=255) tcttTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTc < 1:183574/93‑1 (MQ=255) cttTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCa > 1:4069487/1‑93 (MQ=255) tttCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAg > 1:832738/1‑93 (MQ=255) ttCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGa > 2:5962831/1‑93 (MQ=255) atcaGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACgg > 2:350030/1‑93 (MQ=255) tcaGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCTGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGc < 1:6402470/93‑1 (MQ=255) tcaGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGc > 1:3934497/1‑93 (MQ=255) tcaGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGc > 1:3994696/1‑93 (MQ=255) ttGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCg < 2:501902/93‑1 (MQ=255) ttGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCg > 2:4815340/1‑93 (MQ=255) ttGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCg < 1:760387/93‑1 (MQ=255) ttGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCg > 2:4436157/1‑93 (MQ=255) ggCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGa < 1:1858588/93‑1 (MQ=255) gcgatgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAg < 2:6122931/93‑1 (MQ=255) gcgatgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAg > 1:5834982/1‑93 (MQ=255) cgatgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGt < 2:2248605/93‑1 (MQ=255) cgatgcgatCAAATGCCTCTGCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGt < 2:1092374/93‑1 (MQ=255) gatgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTg > 1:5927473/1‑93 (MQ=255) gatgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTg < 1:241905/93‑1 (MQ=255) tgcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGa < 1:5055225/93‑1 (MQ=255) gcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGAt < 2:4567879/93‑1 (MQ=255) gcgatCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGAt > 1:4945769/1‑93 (MQ=255) tCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGaaa < 1:6148717/93‑1 (MQ=255) tCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGaaa > 1:5216814/1‑93 (MQ=255) cAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAAt > 2:1898230/1‑93 (MQ=255) aaaTGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATc < 2:5260069/93‑1 (MQ=255) aaaTGCCTATTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAGTc > 2:6272248/1‑93 (MQ=255) | GAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAACGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATC > NC_000913/4082926‑4083105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
GGAGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAACGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCACC > NC_000913/4082923‑4083109 | GGAGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAAT < SRR4302537.674638/94‑1 (MQ=60)GGAGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAAT < SRR4302537.4468125/94‑1 (MQ=60) GAGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATG > SRR4302537.3420950/1‑94 (MQ=60) AGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGC > SRR4302537.3495799/1‑94 (MQ=60) GAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCC > SRR4302537.5415193/1‑94 (MQ=60) GAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCC < SRR4302537.4919807/94‑1 (MQ=60) AGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCT > SRR4302537.3775259/1‑94 (MQ=60) AGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCT < SRR4302537.5240996/94‑1 (MQ=60) GCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTC < SRR4302537.6327076/94‑1 (MQ=60) CCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCT > SRR4302537.6106003/1‑94 (MQ=60) CCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCT > SRR4302537.2147917/1‑94 (MQ=60) CCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCT < SRR4302537.4888369/94‑1 (MQ=60) CAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTT > SRR4302537.2047945/1‑94 (MQ=60) CAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTT < SRR4302537.3057050/94‑1 (MQ=60) CAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTT < SRR4302537.2312639/94‑1 (MQ=60) CAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTT < SRR4302537.5110867/94‑1 (MQ=60) AGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTC < SRR4302537.2252055/94‑1 (MQ=60) GCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCC < SRR4302537.2489167/94‑1 (MQ=60) CGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCC > SRR4302537.2821258/1‑94 (MQ=60) CGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCC < SRR4302537.2667629/94‑1 (MQ=60) GGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCA > SRR4302537.5536681/1‑94 (MQ=60) GGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCA > SRR4302537.1475070/1‑94 (MQ=60) GGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCA > SRR4302537.3940524/1‑94 (MQ=60) GGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCA < SRR4302537.5988051/94‑1 (MQ=60) GGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCA > SRR4302537.5893265/1‑94 (MQ=60) GTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAC > SRR4302537.1994331/1‑94 (MQ=60) GTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAA > SRR4302537.4240436/1‑94 (MQ=60) TTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAAC < SRR4302537.1352081/94‑1 (MQ=60) TAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACT < SRR4302537.5636121/94‑1 (MQ=60) AACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTTGCGATGCGATCAAATGCCTCTTCCCAACTG > SRR4302537.422553/1‑94 (MQ=60) AACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTG > SRR4302537.4698308/1‑94 (MQ=60) AGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATT > SRR4302537.481222/1‑94 (MQ=60) GTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTT < SRR4302537.3726905/94‑1 (MQ=60) GTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTT < SRR4302537.6456681/94‑1 (MQ=60) TCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTG < SRR4302537.2792160/94‑1 (MQ=60) CACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGC < SRR4302537.4352806/94‑1 (MQ=60) ACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCT > SRR4302537.4168526/1‑94 (MQ=60) ACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCT > SRR4302537.6257468/1‑94 (MQ=60) CGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTG > SRR4302537.1194077/1‑94 (MQ=60) CGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTG > SRR4302537.1848248/1‑94 (MQ=60) GCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGC > SRR4302537.5389231/1‑94 (MQ=60) CCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCC < SRR4302537.2561189/94‑1 (MQ=60) CGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTT > SRR4302537.6154933/1‑94 (MQ=60) GCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATAAAATGCCTCTTCCCAACTGATTTGCTGCCATTTAT < SRR4302537.1038791/94‑1 (MQ=60) CGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATC < SRR4302537.213872/94‑1 (MQ=60) CGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATC < SRR4302537.4083581/94‑1 (MQ=60) GTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCA > SRR4302537.6478618/1‑94 (MQ=60) GTTTTGCGCAATGTAGTTAGCATCGCGGTCTTC‑TTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAG < SRR4302537.5814261/94‑1 (MQ=60) TTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAG < SRR4302537.1749891/94‑1 (MQ=60) TTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGA > SRR4302537.1782328/1‑94 (MQ=60) TTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGA < SRR4302537.1358594/94‑1 (MQ=60) TGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAAC < SRR4302537.3684170/94‑1 (MQ=60) CGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCT < SRR4302537.3722480/94‑1 (MQ=60) CGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCT > SRR4302537.2777303/1‑94 (MQ=60) GAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGG < SRR4302537.4671645/94‑1 (MQ=60) AATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGC < SRR4302537.4748854/94‑1 (MQ=60) AATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGC < SRR4302537.4364405/94‑1 (MQ=60) AATGTAGTTAGCATCGCGCTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGC < SRR4302537.1670511/94‑1 (MQ=60) ATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCG < SRR4302537.3753889/94‑1 (MQ=60) ATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCG > SRR4302537.5483103/1‑94 (MQ=60) GTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCA > SRR4302537.4291241/1‑94 (MQ=60) TAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCAC < SRR4302537.826104/94‑1 (MQ=60) AGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACG < SRR4302537.2933382/94‑1 (MQ=60) AGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACG > SRR4302537.1693377/1‑94 (MQ=60) GTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGG < SRR4302537.3295929/94‑1 (MQ=60) TAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTA > SRR4302537.3369212/1‑94 (MQ=60) TAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTA < SRR4302537.4276649/94‑1 (MQ=60) AGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTAT > SRR4302537.2450719/1‑94 (MQ=60) AGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTAT > SRR4302537.2519539/1‑94 (MQ=60) GCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATT < SRR4302537.1897720/94‑1 (MQ=60) GCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATT > SRR4302537.5140602/1‑94 (MQ=60) CATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTC > SRR4302537.2735478/1‑94 (MQ=60) CATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTC > SRR4302537.4118215/1‑94 (MQ=60) ATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCC > SRR4302537.5340766/1‑94 (MQ=60) ATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCC > SRR4302537.2492101/1‑94 (MQ=60) ATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCC > SRR4302537.3759656/1‑94 (MQ=60) ATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCC > SRR4302537.3777282/1‑94 (MQ=60) CGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGG > SRR4302537.6007037/1‑94 (MQ=60) CGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGG > SRR4302537.874758/1‑94 (MQ=60) GCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGA > SRR4302537.3038135/1‑94 (MQ=60) CGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAA > SRR4302537.2847334/1‑94 (MQ=60) CGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAA < SRR4302537.649132/94‑1 (MQ=60) GGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAA > SRR4302537.1640176/1‑94 (MQ=60) GGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAA < SRR4302537.85549/94‑1 (MQ=60) GGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAA > SRR4302537.5208782/1‑94 (MQ=60) GGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAA < SRR4302537.2469444/94‑1 (MQ=60) GGTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAA > SRR4302537.2091670/1‑94 (MQ=60) GTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAAC > SRR4302537.6241292/1‑94 (MQ=60) GTCTTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAAC > SRR4302537.1862601/1‑94 (MQ=60) TTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTC < SRR4302537.3822170/94‑1 (MQ=60) TTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTC < SRR4302537.3883468/94‑1 (MQ=60) TTCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTC < SRR4302537.255134/94‑1 (MQ=60) TCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCA < SRR4302537.6204807/94‑1 (MQ=60) TCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCA > SRR4302537.800866/1‑94 (MQ=60) TCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCA > SRR4302537.4097911/1‑94 (MQ=60) TCTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCA < SRR4302537.184879/94‑1 (MQ=60) CTTTCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAG > SRR4302537.838434/1‑94 (MQ=60) TCATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACG < SRR4302537.4454942/94‑1 (MQ=60) CATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGG > SRR4302537.772562/1‑94 (MQ=60) ATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGC > SRR4302537.396410/1‑94 (MQ=60) ATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGC > SRR4302537.3961993/1‑94 (MQ=60) ATCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGC > SRR4302537.4022660/1‑94 (MQ=60) TCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCTGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCT < SRR4302537.6446054/94‑1 (MQ=60) TCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCT > SRR4302537.6287614/1‑94 (MQ=60) TCAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCT < SRR4302537.5833367/94‑1 (MQ=60) CAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTT > SRR4302537.212822/1‑94 (MQ=60) CAGTTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTT < SRR4302537.6332850/94‑1 (MQ=60) GTTTGGCGATGCGATCAAATGCCTCTT‑CCAACTGATTTTCCGCCCTTTATCAGGAACTTGCGCACGGGATTCCGGAAACTTTAGACGGCTTTCG > SRR4302537.4262057/1‑94 (MQ=37) TTTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCG < SRR4302537.827167/94‑1 (MQ=60) TTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGG < SRR4302537.765582/94‑1 (MQ=60) TTGGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGG < SRR4302537.5035281/94‑1 (MQ=60) GGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAG > SRR4302537.5874974/1‑94 (MQ=60) GGCGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAG < SRR4302537.1871534/94‑1 (MQ=60) CGATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTG > SRR4302537.5968151/1‑94 (MQ=60) GATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGG < SRR4302537.4012521/94‑1 (MQ=60) GATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGG < SRR4302537.243620/94‑1 (MQ=60) GATGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGG < SRR4302537.5309780/94‑1 (MQ=60) TGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGAT < SRR4302537.3404418/94‑1 (MQ=60) TGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGAT > SRR4302537.4979871/1‑94 (MQ=60) TGCGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGAT < SRR4302537.5090027/94‑1 (MQ=60) CGATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGA > SRR4302537.3833969/1‑94 (MQ=60) GATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAA > SRR4302537.2014305/1‑94 (MQ=60) GATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAA < SRR4302537.1986463/94‑1 (MQ=60) ATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAA > SRR4302537.5252689/1‑94 (MQ=60) ATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAA > SRR4302537.6509696/1‑94 (MQ=60) ATCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAA < SRR4302537.4844603/94‑1 (MQ=60) TCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAAT < SRR4302537.2269532/94‑1 (MQ=60) TCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAAT < SRR4302537.6191007/94‑1 (MQ=60) TCAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCACACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAAT < SRR4302537.1706414/94‑1 (MQ=60) CAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATC > SRR4302537.4948574/1‑94 (MQ=60) CAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATC < SRR4302537.5952203/94‑1 (MQ=60) CAAATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATC < SRR4302537.915875/94‑1 (MQ=60) AATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCA > SRR4302537.653747/1‑94 (MQ=60) AATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCA > SRR4302537.473665/1‑94 (MQ=60) AATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCA < SRR4302537.2188385/94‑1 (MQ=60) AATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCA < SRR4302537.6005073/94‑1 (MQ=60) ATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGACCCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCAC < SRR4302537.3506807/94‑1 (MQ=60) ATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCAC < SRR4302537.6028011/94‑1 (MQ=60) ATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGGATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCAC > SRR4302537.3101330/1‑94 (MQ=60) ATGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCGGGCGCACGGTATTCCGGAAACTGCAGACGGCTTTCGGAGTGGATGAAATCCAC < SRR4302537.523941/94‑1 (MQ=60) TGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCACC > SRR4302537.5320348/1‑94 (MQ=60) | GGAGAGCCAGCGGTTAACAGTCACGCCTTCGGCGTTTTGCGCAATGTAGTTAGCATCGCGGTCTTCTTTCATCAGTTTGGCGATGCGATCAAACGCCTCTTCCCAACTGATTTGCTGCCATTTATCAGAACCTGGCGCACGGTATTCCGGAAACTTCAGACGGCTTTCGGAGTGGATGAAATCCACC > NC_000913/4082923‑4083109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |