Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,272,173 |
A→G |
Q157R (CAG→CGG) |
ssb → |
ssDNA‑binding protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,272,173 | 0 | A | G | 99.6%
| 797.0
/ NA
| 229 | Q157R (CAG→CGG) | ssb | ssDNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (99/129); minor base T (0/1); total (99/130) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 256 total aligned reads displayed.
TCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTT > NC_000913/4272083‑4272262
|
tCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCgcggc > 1:4849575/1‑93 (MQ=255)
tCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCgcggc > 2:3400268/1‑93 (MQ=255)
ggtggtggtCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGcggcag < 1:1075246/93‑1 (MQ=255)
ggtggtggtCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGcggcag < 2:3681435/93‑1 (MQ=255)
gtggtggtCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGt < 2:1176632/93‑1 (MQ=255)
ggtCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCt > 2:1559419/1‑93 (MQ=255)
tgaGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTcc < 2:261739/91‑1 (MQ=255)
tCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTcc > 1:6015765/1‑93 (MQ=255)
tCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTcc < 1:5829331/93‑1 (MQ=255)
tCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTcc < 1:3168988/93‑1 (MQ=255)
ccGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCa < 2:6299107/93‑1 (MQ=255)
cGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAg > 1:3268886/1‑93 (MQ=255)
cGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGGCTCGCCCGCGGCAGTCCGCTCCCGCAg > 2:5987422/1‑93 (MQ=255)
gCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAgc < 1:1677553/93‑1 (MQ=255)
gggCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGcc < 2:6319892/93‑1 (MQ=255)
ggCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCg < 1:153502/93‑1 (MQ=255)
cGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTc < 1:935363/93‑1 (MQ=255)
ggTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCt > 1:1631108/1‑93 (MQ=255)
gTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTa > 2:5062434/1‑93 (MQ=255)
ttGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTaa < 1:5071831/93‑1 (MQ=255)
ggggTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACg < 1:685384/93‑1 (MQ=255)
ggTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAg < 2:6108372/93‑1 (MQ=255)
ggTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAg > 2:545078/1‑93 (MQ=255)
ggTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAg > 2:2542733/1‑93 (MQ=255)
ggTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAg > 2:5252391/1‑93 (MQ=255)
gTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAgc < 2:5529281/93‑1 (MQ=255)
tCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAgcc > 1:2355480/1‑93 (MQ=255)
aGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAgccgc < 1:4386645/93‑1 (MQ=255)
gCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAgccgcc > 2:5735426/1‑93 (MQ=255)
gCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAgccgcc > 2:811047/1‑93 (MQ=255)
cTCAGCGGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGa < 2:4275400/93‑1 (MQ=255)
tCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGAt > 2:5221407/1‑93 (MQ=255)
tCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGAt > 1:4428257/1‑93 (MQ=255)
cagcagCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATg < 1:3755785/93‑1 (MQ=255)
gcagcCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGa > 1:621179/1‑93 (MQ=255)
gcagcCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGa > 2:4617904/1‑93 (MQ=255)
cagcCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGAc < 2:1552544/93‑1 (MQ=255)
agcCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACt > 1:2160212/1‑93 (MQ=255)
cGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtg > 1:1881537/1‑93 (MQ=255)
cGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtg < 2:5656492/93‑1 (MQ=255)
gCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtga > 1:2900243/1‑93 (MQ=255)
gCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtga < 2:2155780/93‑1 (MQ=255)
cAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgat < 2:4914277/93‑1 (MQ=255)
cAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgat > 2:440298/1‑93 (MQ=255)
aGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCTGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatg < 1:1270910/93‑1 (MQ=255)
aGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatg < 2:6229850/93‑1 (MQ=255)
gggTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatga < 2:280099/93‑1 (MQ=255)
gggTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatga > 2:3510611/1‑93 (MQ=255)
ggTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatgat < 1:5708421/93‑1 (MQ=255)
gTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatgatg < 2:237463/93‑1 (MQ=255)
tGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatgatga < 1:1250773/93‑1 (MQ=255)
tGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatgatga > 1:864206/1‑93 (MQ=255)
gggCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTtgatgatga < 1:3835933/92‑1 (MQ=255)
ggCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGAc < 1:3542017/93‑1 (MQ=255)
gCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACa > 1:5394171/1‑93 (MQ=255)
cAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACAt > 1:4185503/1‑93 (MQ=255)
aTCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTc > 2:6477096/1‑93 (MQ=255)
tCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTcc > 2:2754669/1‑93 (MQ=255)
cAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGCTGGACTTTGATGATGACATTcct > 1:2217905/1‑92 (MQ=255)
cAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCg < 2:2909525/93‑1 (MQ=255)
aGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGt < 2:5192681/93‑1 (MQ=255)
gTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGtt > 2:306589/1‑93 (MQ=255)
gTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGtt > 1:4630338/1‑93 (MQ=255)
ttCAGCGGCGGCGCGCAGTCTCGCCCGCTGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTc < 1:5587109/93‑1 (MQ=255)
ttCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTc < 2:590276/93‑1 (MQ=255)
ttCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTc > 2:3007036/1‑93 (MQ=255)
ttCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTc < 1:4777355/93‑1 (MQ=255)
ttCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTc < 1:2731835/93‑1 (MQ=255)
tCAGCGGCGGCGCGCAGTTTCGCCCGCGGCAGTCCGCTCCGGCAGCGCGGTCTACCGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCt < 2:2684444/93‑1 (MQ=255)
tCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCt < 1:947859/93‑1 (MQ=255)
tCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCt > 1:2417514/1‑93 (MQ=255)
aGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGa > 2:3135142/1‑93 (MQ=255)
gcggcggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAt < 1:2983285/93‑1 (MQ=255)
cggcggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAtt < 1:4340416/93‑1 (MQ=255)
cggcgccgCGCAGCCTCGCCGGTGGCAGTCCACTCCGGCAGCGCCGACTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAtt < 2:793863/93‑1 (MQ=255)
ggcggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAttt < 2:93336/93‑1 (MQ=255)
ggcggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAttt > 1:1994544/1‑93 (MQ=255)
ggcggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAttt < 2:4215244/93‑1 (MQ=255)
ggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTc < 2:3995986/93‑1 (MQ=255)
ggcgCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTc > 2:1910134/1‑93 (MQ=255)
gcgcgcAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCa < 1:3428794/93‑1 (MQ=255)
gcgcgcAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCa < 2:2262583/93‑1 (MQ=255)
gcgcgcAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGAACTTTGATGATGACATTCCGTTCTGATTTGTCa < 1:6064165/93‑1 (MQ=255)
gcAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTaa > 1:5162583/1‑93 (MQ=255)
gcAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTaa < 2:2007137/93‑1 (MQ=255)
gaGTCTCGCCCGCGCCAGTCGGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTaaa < 1:2055533/92‑1 (MQ=255)
gcatcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATTGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAc < 1:3021840/90‑1 (MQ=255)
gTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAc < 2:1755430/93‑1 (MQ=255)
gTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAc > 1:2693619/1‑93 (MQ=255)
gTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAc > 1:4945220/1‑93 (MQ=255)
tctcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACa > 2:12703/1‑93 (MQ=255)
ctcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACaa < 1:5551331/93‑1 (MQ=255)
ctcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACaa > 1:1750971/1‑93 (MQ=255)
tcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAt > 1:6445411/1‑93 (MQ=255)
tcGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAt > 1:5660678/1‑93 (MQ=255)
gCCCGGGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGTACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAg < 2:5157499/93‑1 (MQ=255)
gCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAg < 1:1017848/93‑1 (MQ=255)
cccGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAgg > 1:3677859/1‑93 (MQ=255)
ccGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGt < 2:4291304/93‑1 (MQ=255)
cgcgGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGtt < 1:6276067/93‑1 (MQ=255)
|
TCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTT > NC_000913/4272083‑4272262
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT > NC_000913/4272080‑4272266
|
ATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCG < SRR4302537.2057830/94‑1 (MQ=60)
ATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCG < SRR4302537.5572776/94‑1 (MQ=60)
ATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCG > SRR4302537.5106555/1‑94 (MQ=60)
TATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGGAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGG > SRR4302537.3477063/1‑94 (MQ=60)
TATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGG > SRR4302537.1865432/1‑94 (MQ=60)
ATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGC > SRR4302537.4883038/1‑94 (MQ=60)
GGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGT < SRR4302537.1082654/94‑1 (MQ=60)
GGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGT < SRR4302537.2183919/94‑1 (MQ=60)
GGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCG > SRR4302537.3697628/1‑94 (MQ=60)
GGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCG < SRR4302537.6287216/94‑1 (MQ=60)
GTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCC < SRR4302537.1341965/94‑1 (MQ=60)
GTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCC > SRR4302537.6057098/1‑94 (MQ=60)
GTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCC < SRR4302537.3377885/94‑1 (MQ=60)
TCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCG < SRR4302537.5869288/94‑1 (MQ=60)
TCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCG < SRR4302537.2062809/94‑1 (MQ=60)
TCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCG < SRR4302537.3191253/94‑1 (MQ=60)
AGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGC > SRR4302537.665766/1‑94 (MQ=60)
CCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAG > SRR4302537.3291952/1‑94 (MQ=60)
CCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGAGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAG > SRR4302537.3492298/1‑94 (MQ=60)
GCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCG < SRR4302537.1689295/94‑1 (MQ=60)
GCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCG > SRR4302537.3584094/1‑94 (MQ=60)
CAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGC < SRR4302537.391360/94‑1 (MQ=60)
GGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGT < SRR4302537.154595/94‑1 (MQ=60)
GGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGT < SRR4302537.6125004/94‑1 (MQ=60)
CGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCT > SRR4302537.1642534/1‑94 (MQ=60)
CGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCT < SRR4302537.941809/94‑1 (MQ=60)
CGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCT > SRR4302537.2948005/1‑94 (MQ=60)
GGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTA > SRR4302537.4688902/1‑94 (MQ=60)
GTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAA > SRR4302537.5198172/1‑94 (MQ=60)
TTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAAC < SRR4302537.5106752/94‑1 (MQ=60)
GGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGA < SRR4302537.690087/94‑1 (MQ=60)
GTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCC > SRR4302537.4390008/1‑94 (MQ=60)
GTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCC < SRR4302537.6399181/94‑1 (MQ=60)
GTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCC > SRR4302537.2372087/1‑94 (MQ=60)
AGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCC < SRR4302537.4416908/94‑1 (MQ=60)
CTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGAT > SRR4302537.4539061/1‑94 (MQ=60)
CTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGAT > SRR4302537.4458839/1‑94 (MQ=60)
CTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGAT > SRR4302537.175863/1‑94 (MQ=60)
TCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATG < SRR4302537.1969801/94‑1 (MQ=60)
TCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATG < SRR4302537.5611955/94‑1 (MQ=60)
TCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATG < SRR4302537.5712728/94‑1 (MQ=60)
CAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGG < SRR4302537.5810709/94‑1 (MQ=60)
CAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGG < SRR4302537.3782157/94‑1 (MQ=60)
AGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGA > SRR4302537.625410/1‑94 (MQ=60)
AGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGA > SRR4302537.2626214/1‑94 (MQ=60)
AGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGA > SRR4302537.2985672/1‑94 (MQ=60)
AGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGA > SRR4302537.6441959/1‑94 (MQ=60)
GCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGAC < SRR4302537.943156/94‑1 (MQ=60)
GCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGAC < SRR4302537.276700/94‑1 (MQ=60)
CAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACT < SRR4302537.562818/94‑1 (MQ=60)
CAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACT > SRR4302537.2175441/1‑94 (MQ=60)
AGCCGCAGGGTGGCAATCGGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTT > SRR4302537.1404414/1‑94 (MQ=60)
AGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTT < SRR4302537.900112/94‑1 (MQ=60)
AGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTT > SRR4302537.894812/1‑94 (MQ=60)
CCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTG > SRR4302537.1894623/1‑94 (MQ=60)
CCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTG < SRR4302537.1060647/94‑1 (MQ=60)
CGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGA > SRR4302537.2920620/1‑94 (MQ=60)
GCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGAT < SRR4302537.3905036/94‑1 (MQ=60)
GCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGAT < SRR4302537.804433/94‑1 (MQ=60)
GCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGAT < SRR4302537.1277381/94‑1 (MQ=60)
CAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATG < SRR4302537.4270573/94‑1 (MQ=60)
gggggGGCAATCAGTTGAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCTCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGA < SRR4302537.1139431/89‑1 (MQ=60)
AGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCTGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGA < SRR4302537.1279747/94‑1 (MQ=60)
GGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGAT < SRR4302537.5546538/94‑1 (MQ=60)
GGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGAT < SRR4302537.4404573/94‑1 (MQ=60)
GGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATG < SRR4302537.5747483/94‑1 (MQ=60)
GGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATG > SRR4302537.5854835/1‑94 (MQ=60)
GGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATG > SRR4302537.377584/1‑94 (MQ=60)
GTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGTGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGA < SRR4302537.3187335/94‑1 (MQ=60)
GTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGA > SRR4302537.870135/1‑94 (MQ=60)
TGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGAC < SRR4302537.1259481/94‑1 (MQ=60)
GGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGAC < SRR4302537.3862812/94‑1 (MQ=60)
GGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGAC < SRR4302537.4854998/94‑1 (MQ=60)
GGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACA < SRR4302537.3567040/94‑1 (MQ=60)
GGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACA < SRR4302537.1937638/94‑1 (MQ=60)
GGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACA > SRR4302537.5431008/1‑94 (MQ=60)
GCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACAT > SRR4302537.4214724/1‑94 (MQ=60)
GCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACAT < SRR4302537.3772382/94‑1 (MQ=60)
GCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACAT < SRR4302537.5918891/94‑1 (MQ=60)
GCAACCGGTTGAGCGGCGGCGCGCAGTCTCGCCCGCGGCATTCCGCCCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACAT < SRR4302537.3772384/94‑1 (MQ=60)
AATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTC < SRR4302537.1186780/94‑1 (MQ=60)
AATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTC > SRR4302537.6166112/1‑94 (MQ=60)
ATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCC < SRR4302537.2299077/94‑1 (MQ=60)
ATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCC < SRR4302537.1675736/94‑1 (MQ=60)
ATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCC < SRR4302537.3085984/94‑1 (MQ=60)
TCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGCTGGACTTTGATGATGACATTCCT > SRR4302537.2233541/1‑94 (MQ=60)
TCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCG < SRR4302537.284309/94‑1 (MQ=60)
TCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCG < SRR4302537.322364/94‑1 (MQ=60)
AGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTT > SRR4302537.2741214/1‑94 (MQ=60)
AGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTT < SRR4302537.5927871/94‑1 (MQ=60)
AGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTT > SRR4302537.3024146/1‑94 (MQ=60)
AGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTT > SRR4302537.4828893/1‑94 (MQ=60)
AGTTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTT > SRR4302537.4662372/1‑94 (MQ=60)
TTCAGCGGCGGCGCGCAGTCTCGCCCGCTGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCT < SRR4302537.5625311/94‑1 (MQ=60)
TTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCT < SRR4302537.4810337/94‑1 (MQ=60)
TTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCT < SRR4302537.2750902/94‑1 (MQ=60)
TTCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCT > SRR4302537.2434538/1‑94 (MQ=60)
TTCAGCGGCGGCGCGCAGTCTCGCCCGCGCCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCT < SRR4302537.1734581/94‑1 (MQ=60)
TCAGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTG < SRR4302537.954416/94‑1 (MQ=60)
AGCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGAT < SRR4302537.753311/94‑1 (MQ=60)
GCGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATT < SRR4302537.3004138/94‑1 (MQ=60)
GCGGCGGCGCCCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATT < SRR4302537.1191503/94‑1 (MQ=60)
CGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTT > SRR4302537.2008410/1‑94 (MQ=60)
CGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTT < SRR4302537.2260914/94‑1 (MQ=60)
CGGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTT < SRR4302537.4370532/94‑1 (MQ=60)
GGCGGCGCGCAGTCTCGCCCGCGGCAGTTCGCTCCGGCAGCGCCGTCTAACGAGCCGACGATGGACTTTGATGATGACATTCCGTTCTGATTTT > SRR4302537.2437326/1‑94 (MQ=60)
GGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTG > SRR4302537.2170557/1‑94 (MQ=60)
GGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTG < SRR4302537.6101308/94‑1 (MQ=60)
GGCGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTG < SRR4302537.4471602/94‑1 (MQ=60)
CGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTC < SRR4302537.4982688/94‑1 (MQ=60)
CGGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTC > SRR4302537.4453261/1‑94 (MQ=60)
GGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCA > SRR4302537.2627661/1‑94 (MQ=60)
GGCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCA < SRR4302537.1655939/94‑1 (MQ=60)
GCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCAT < SRR4302537.3821522/94‑1 (MQ=60)
GCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCAT < SRR4302537.3453063/94‑1 (MQ=60)
GCGCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGAACTTTGATGATGACATTCCGTTCTGATTTGTCAT < SRR4302537.6105831/94‑1 (MQ=60)
GCGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTA < SRR4302537.511881/94‑1 (MQ=60)
CGCAGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAA > SRR4302537.5198167/1‑94 (MQ=60)
GAGTCTCGCCCGCGCCAGTCGGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAA < SRR4302537.2069961/94‑1 (MQ=60)
AGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAC > SRR4302537.184484/1‑94 (MQ=60)
AGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAC > SRR4302537.2712443/1‑94 (MQ=60)
AGTCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAAC > SRR4302537.4979321/1‑94 (MQ=60)
gcaTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATTGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACA < SRR4302537.3042904/91‑1 (MQ=60)
TCTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAA > SRR4302537.1763174/1‑94 (MQ=60)
CTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAT > SRR4302537.5699416/1‑94 (MQ=60)
CTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAT < SRR4302537.5589239/94‑1 (MQ=60)
CTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAT > SRR4302537.6489139/1‑94 (MQ=60)
CTCGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAAT > SRR4302537.2138782/1‑94 (MQ=60)
CGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAG < SRR4302537.1821013/94‑1 (MQ=60)
CGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAG > SRR4302537.1575263/1‑94 (MQ=60)
CGCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAG < SRR4302537.3374339/94‑1 (MQ=60)
GCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGG < SRR4302537.1024859/94‑1 (MQ=60)
GCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGG > SRR4302537.3703734/1‑94 (MQ=60)
GCCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGG > SRR4302537.5193251/1‑94 (MQ=60)
CCCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGT > SRR4302537.5481433/1‑94 (MQ=60)
CCCCCGGCAGTCCCCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGT < SRR4302537.1522851/94‑1 (MQ=60)
CCGCGGCAGTCCGCTCCGGCAGCGCCTTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTT < SRR4302537.4979019/94‑1 (MQ=60)
CCGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTT > SRR4302537.4911562/1‑94 (MQ=60)
CGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTA < SRR4302537.6319127/94‑1 (MQ=60)
CGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTA < SRR4302537.2404640/94‑1 (MQ=60)
CGCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTA < SRR4302537.5650363/94‑1 (MQ=60)
GCGGCAGTCCGGTCGGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTAT < SRR4302537.1361413/94‑1 (MQ=60)
GCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTAT < SRR4302537.3947172/94‑1 (MQ=60)
GCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTAT < SRR4302537.3346830/94‑1 (MQ=60)
GCGGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTAT < SRR4302537.2529803/94‑1 (MQ=60)
GGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT > SRR4302537.4622805/1‑94 (MQ=60)
GGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT < SRR4302537.54376/94‑1 (MQ=60)
GGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT < SRR4302537.5189706/94‑1 (MQ=60)
GGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT < SRR4302537.2816011/94‑1 (MQ=60)
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ATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATAT > NC_000913/4272080‑4272266
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |