Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,591,062 |
T→C |
T411A (ACT→GCT) |
yjiZ ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,591,062 | 0 | T | C | 98.0%
| 856.9
/ 2.4
| 253 | T411A (ACT→GCT) | yjiZ | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (2/3); new base C (126/122); total (128/125) |
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 256 total aligned reads displayed.
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGTAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGT > NC_000913/4590972‑4591151
|
aGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCaa < 2:2144244/93‑1 (MQ=255)
gATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAAt < 2:6193220/93‑1 (MQ=255)
gATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAAACAGCAAt > 1:5100457/1‑93 (MQ=255)
aTGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGCGCCAGACGGAATGAGCGGGTGGCATCAACAATAAAACCCGCAATg > 2:3821793/1‑93 (MQ=255)
tGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGa < 2:6400448/93‑1 (MQ=255)
tACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATc > 2:1817300/1‑93 (MQ=255)
gCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGgc < 1:894187/93‑1 (MQ=255)
aGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCa > 2:1485283/1‑93 (MQ=255)
gTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCaa < 1:545616/93‑1 (MQ=255)
tGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCaaa < 1:5130166/93‑1 (MQ=255)
gCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCaaaa < 1:4615374/93‑1 (MQ=255)
gCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCaaaa < 1:1852467/93‑1 (MQ=255)
ccccGCTGCGGTGACGCAACCGCCGATGATTAGTGCCAGACGGAATGAGGGGGTGGTATCAACAATAAAACCAGCAATGCTCGGCGCAAAaga > 2:2777276/1‑93 (MQ=255)
ccccGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAaga < 1:3662442/93‑1 (MQ=255)
cccGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGTAAAagag < 2:6139377/93‑1 (MQ=255)
cccGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAagag > 1:1029596/1‑93 (MQ=255)
cccGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAagag > 1:3471183/1‑93 (MQ=255)
cccGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAagag < 2:5439212/93‑1 (MQ=255)
cGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGgc < 2:3329540/93‑1 (MQ=255)
cGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGgc < 2:2600085/93‑1 (MQ=255)
gCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGgcg > 2:1295983/1‑93 (MQ=255)
cTGCGGTGACGCAACCGCAGATGATTGGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGgcgc > 1:5843074/1‑93 (MQ=255)
cTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGgcgc > 1:1351854/1‑93 (MQ=255)
tGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCa < 1:1338699/93‑1 (MQ=255)
gCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAg > 1:2520445/1‑93 (MQ=255)
gCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAg > 1:2342707/1‑93 (MQ=255)
cGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGa < 1:6225014/93‑1 (MQ=255)
gTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATg > 1:3129706/1‑93 (MQ=255)
gTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATg > 2:3433620/1‑93 (MQ=255)
tGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGa < 1:3844/93‑1 (MQ=255)
gACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGaa > 2:2265197/1‑93 (MQ=255)
cAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTg > 1:439777/1‑93 (MQ=255)
cAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTg > 2:4890122/1‑93 (MQ=255)
gCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCaaa < 2:494863/93‑1 (MQ=255)
cAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAg < 2:2454164/93‑1 (MQ=255)
cAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAg < 2:564460/93‑1 (MQ=255)
aGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGt > 1:3826245/1‑93 (MQ=255)
aGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGt > 2:6326939/1‑93 (MQ=255)
aGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGt > 2:831750/1‑93 (MQ=255)
aGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGt < 1:673593/93‑1 (MQ=255)
atgatTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTc > 2:961011/1‑93 (MQ=255)
atgatTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTc < 2:4477030/93‑1 (MQ=255)
tgatTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCt < 1:71815/93‑1 (MQ=255)
tgatTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCt > 1:4591953/1‑93 (MQ=255)
gatTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTg > 1:5705217/1‑93 (MQ=255)
atTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTgg < 2:6005273/93‑1 (MQ=255)
atTAGCGCCAGACGGAATGAGTGGGTGGGATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGGTCTgg > 2:5490054/1‑93 (MQ=255)
ttAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTTTggt > 2:5207877/1‑92 (MQ=255)
gTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATAc < 2:4300883/93‑1 (MQ=255)
gTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATAc < 2:4561595/93‑1 (MQ=255)
gTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATAc > 2:1641493/1‑93 (MQ=255)
tGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACt > 2:5064247/1‑93 (MQ=255)
gCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTg > 2:2164924/1‑93 (MQ=255)
ccAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGc < 1:5556631/93‑1 (MQ=255)
ccAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGc < 2:2236274/93‑1 (MQ=255)
aGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGccc > 1:6067092/1‑93 (MQ=255)
gACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCa < 2:2768902/93‑1 (MQ=255)
gACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCa < 2:1381568/93‑1 (MQ=255)
aCGGAATGAGTGGTTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCAc < 1:4117853/93‑1 (MQ=255)
aCGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCAc < 1:2716711/93‑1 (MQ=255)
cGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCAcc < 1:6461578/93‑1 (MQ=255)
ggAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCg < 2:73645/93‑1 (MQ=255)
ggAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCg > 2:3600467/1‑93 (MQ=255)
gAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGa > 2:1055382/1‑93 (MQ=255)
gAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGa > 2:3312190/1‑93 (MQ=255)
aaTGAGTGGGTGTTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAc < 2:2512382/93‑1 (MQ=255)
aaTGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAc > 1:2064857/1‑93 (MQ=255)
aaTGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAc < 2:3767455/93‑1 (MQ=255)
aaTGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAc > 1:4274225/1‑93 (MQ=255)
tgggtggTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTc < 2:6184139/93‑1 (MQ=255)
gggtggTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCa < 1:961011/93‑1 (MQ=255)
gtggtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATg < 1:1924545/93‑1 (MQ=255)
tggtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATAc < 2:1548945/72‑1 (MQ=255)
tggtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGc > 2:2022114/1‑93 (MQ=255)
tggtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGc < 1:266928/93‑1 (MQ=255)
tggtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGc < 2:2053731/93‑1 (MQ=255)
gtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCga < 2:1223292/93‑1 (MQ=255)
gtATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCga < 1:1673324/93‑1 (MQ=255)
aTCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCgaga < 1:6407834/93‑1 (MQ=255)
aTCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCgaga < 2:2992795/93‑1 (MQ=255)
caacaaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAg > 2:1970220/1‑93 (MQ=255)
aacaaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGc > 2:4512256/1‑93 (MQ=255)
aacaaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGc > 2:4690029/1‑93 (MQ=255)
acaaTAAAACCAGTAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTTGATACTGCCCACCGACGCAGTCATGCGAGAAGCa > 2:4007889/1‑93 (MQ=255)
acaaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCa > 2:5891122/1‑93 (MQ=255)
caaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCaa > 1:5886407/1‑93 (MQ=255)
aaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCCCCGACGCAGTCATGCGAGAAGCGAc > 1:6246545/1‑93 (MQ=255)
aaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAAc < 1:4905925/93‑1 (MQ=255)
aaTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAAc < 1:3004660/93‑1 (MQ=255)
aTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACt > 1:4822775/1‑93 (MQ=255)
aTAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACt > 1:5786433/1‑93 (MQ=255)
tAAAACCAGCAATGATCGTCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTg < 1:932969/93‑1 (MQ=255)
aaaCCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCg > 1:1450007/1‑93 (MQ=255)
aaCCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGTAAAGTTCTGGATACTGCCGAGAGACGCAGTCAAGCGGGAAGCAACTACgc > 1:6376058/1‑92 (MQ=255)
aaCCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGa < 1:3574031/93‑1 (MQ=255)
aCCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGAc > 2:2646321/1‑93 (MQ=255)
ccAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACg < 1:1085016/93‑1 (MQ=255)
cAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGt < 1:233101/93‑1 (MQ=255)
cAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGt > 2:4174303/1‑93 (MQ=255)
cAGCAATGAGCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTGCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGt < 1:3318584/93‑1 (MQ=255)
|
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGTAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGT > NC_000913/4590972‑4591151
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGAAGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGTAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGGAT > NC_000913/4590969‑4591155
|
GGAAGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGC > SRR4302537.6213725/1‑94 (MQ=60)
AAGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAA < SRR4302537.2960702/94‑1 (MQ=60)
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAAT < SRR4302537.4454175/94‑1 (MQ=60)
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAAT > SRR4302537.1400925/1‑94 (MQ=60)
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAAT < SRR4302537.5142424/94‑1 (MQ=60)
AGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAAACAGCAAT > SRR4302537.5135598/1‑94 (MQ=60)
GTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATC < SRR4302537.6508480/94‑1 (MQ=60)
GCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCG < SRR4302537.900357/94‑1 (MQ=60)
CAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCA > SRR4302537.5897379/1‑94 (MQ=60)
GTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAA < SRR4302537.549368/94‑1 (MQ=60)
TGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAA < SRR4302537.5165520/94‑1 (MQ=60)
GCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAG > SRR4302537.3686000/1‑94 (MQ=60)
GCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAG < SRR4302537.1865348/94‑1 (MQ=60)
GCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAG < SRR4302537.4647338/94‑1 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG > SRR4302537.1036687/1‑94 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG > SRR4302537.2648111/1‑94 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG < SRR4302537.3688218/94‑1 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG > SRR4302537.3495742/1‑94 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG > SRR4302537.1356856/1‑94 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG < SRR4302537.6219306/94‑1 (MQ=60)
CCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAG > SRR4302537.1737171/1‑94 (MQ=60)
CCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGG > SRR4302537.2046987/1‑94 (MQ=60)
CCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGG < SRR4302537.5001380/94‑1 (MQ=60)
CGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCG > SRR4302537.2162886/1‑94 (MQ=60)
CGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCG < SRR4302537.3263182/94‑1 (MQ=60)
GCTGCGGTGACGCAACCGCAGATGATTGGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGC > SRR4302537.5883137/1‑94 (MQ=60)
GCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGC > SRR4302537.1361271/1‑94 (MQ=60)
CTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCA > SRR4302537.2494615/1‑94 (MQ=60)
TGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAG > SRR4302537.6398140/1‑94 (MQ=60)
TGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAG > SRR4302537.2359213/1‑94 (MQ=60)
TGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAG > SRR4302537.2538142/1‑94 (MQ=60)
TGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAG < SRR4302537.1348023/94‑1 (MQ=60)
GCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGA < SRR4302537.1880276/94‑1 (MQ=60)
GCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGA > SRR4302537.4873425/1‑94 (MQ=60)
GCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGA > SRR4302537.1097597/1‑94 (MQ=60)
GCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGA < SRR4302537.6428576/94‑1 (MQ=60)
CGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGAT < SRR4302537.5679835/94‑1 (MQ=60)
CGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGAT < SRR4302537.6267853/94‑1 (MQ=60)
CGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGAT < SRR4302537.2078198/94‑1 (MQ=60)
GGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATG > SRR4302537.3151645/1‑94 (MQ=60)
TGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAA < SRR4302537.3878/94‑1 (MQ=60)
TGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAA > SRR4302537.2158438/1‑94 (MQ=60)
GACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAG < SRR4302537.468477/94‑1 (MQ=60)
CGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCT > SRR4302537.5844591/1‑94 (MQ=60)
GCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTG > SRR4302537.442835/1‑94 (MQ=60)
GCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTG > SRR4302537.3419313/1‑94 (MQ=60)
CAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGG < SRR4302537.1087174/94‑1 (MQ=60)
AACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGC > SRR4302537.5890479/1‑94 (MQ=60)
CGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAA > SRR4302537.403922/1‑94 (MQ=60)
GCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAG > SRR4302537.648871/1‑94 (MQ=60)
CAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGT > SRR4302537.3853072/1‑94 (MQ=60)
AGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTT < SRR4302537.678203/94‑1 (MQ=60)
AGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTT < SRR4302537.2717617/94‑1 (MQ=60)
AGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTT > SRR4302537.3864540/1‑94 (MQ=60)
GATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTC < SRR4302537.6282746/94‑1 (MQ=60)
GATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTC < SRR4302537.1433782/94‑1 (MQ=60)
ATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCT > SRR4302537.4623715/1‑94 (MQ=60)
ATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCT > SRR4302537.5730452/1‑94 (MQ=60)
ATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCT > SRR4302537.6212649/1‑94 (MQ=60)
TGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTG > SRR4302537.3578455/1‑94 (MQ=60)
TGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTG > SRR4302537.5744265/1‑94 (MQ=60)
TGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTG < SRR4302537.72342/94‑1 (MQ=60)
TGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTG > SRR4302537.3773066/1‑94 (MQ=60)
GATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGG < SRR4302537.2987706/94‑1 (MQ=60)
GATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGG < SRR4302537.3575902/94‑1 (MQ=60)
ATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGA > SRR4302537.5795867/1‑94 (MQ=60)
GTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACT < SRR4302537.957036/94‑1 (MQ=60)
TGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTG > SRR4302537.4629178/1‑94 (MQ=60)
CCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCC < SRR4302537.5594597/94‑1 (MQ=60)
CAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCC > SRR4302537.6108771/1‑94 (MQ=60)
AGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCA > SRR4302537.2725527/1‑94 (MQ=60)
ACGGAATGAGTGGTTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACC < SRR4302537.4146611/94‑1 (MQ=60)
ACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACC < SRR4302537.3400172/94‑1 (MQ=60)
ACGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACC < SRR4302537.2735684/94‑1 (MQ=60)
CGGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCG < SRR4302537.6505363/94‑1 (MQ=60)
GGAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGA > SRR4302537.757823/1‑94 (MQ=60)
GAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAC > SRR4302537.2463148/1‑94 (MQ=60)
GAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAC > SRR4302537.4303931/1‑94 (MQ=60)
GAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAC > SRR4302537.2079356/1‑94 (MQ=60)
GAATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGAC > SRR4302537.2357025/1‑94 (MQ=60)
AATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACG < SRR4302537.5001867/94‑1 (MQ=60)
AATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACG < SRR4302537.4493020/94‑1 (MQ=60)
ATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGC > SRR4302537.4016100/1‑94 (MQ=60)
ATGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGC > SRR4302537.5551825/1‑94 (MQ=60)
TGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCA < SRR4302537.439078/94‑1 (MQ=60)
TGAGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCA < SRR4302537.3146512/94‑1 (MQ=60)
AGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGT > SRR4302537.674374/1‑94 (MQ=60)
AGTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGT > SRR4302537.4704496/1‑94 (MQ=60)
GTGGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTC < SRR4302537.678421/94‑1 (MQ=60)
GGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCAT < SRR4302537.967640/94‑1 (MQ=60)
GGGTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCAT < SRR4302537.843831/94‑1 (MQ=60)
GTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTacggaatagatcggaagagc > SRR4302537.1559755/1‑74 (MQ=60)
GTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGC > SRR4302537.3094989/1‑94 (MQ=60)
GTGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGC < SRR4302537.1937905/94‑1 (MQ=60)
TGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGTCCACCGACGCAGTCATGCG > SRR4302537.6504327/1‑94 (MQ=60)
TGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCG < SRR4302537.268801/94‑1 (MQ=60)
TGGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCG < SRR4302537.1728885/94‑1 (MQ=60)
GGTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGA > SRR4302537.916546/1‑94 (MQ=60)
GTATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAG < SRR4302537.1685041/94‑1 (MQ=60)
TATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGA > SRR4302537.5327430/1‑94 (MQ=60)
ATCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAA < SRR4302537.6451441/94‑1 (MQ=60)
TCAACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAG > SRR4302537.5817924/1‑94 (MQ=60)
ACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAA > SRR4302537.5926797/1‑94 (MQ=60)
ACAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAA < SRR4302537.423828/94‑1 (MQ=60)
CAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCCCCGACGCAGTCATGCGAGAAGCGAC > SRR4302537.6289470/1‑94 (MQ=60)
CAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAAC > SRR4302537.6358234/1‑94 (MQ=60)
CAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAAC > SRR4302537.4348439/1‑94 (MQ=60)
CAATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAAC < SRR4302537.1279571/94‑1 (MQ=60)
AATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACT > SRR4302537.5951653/1‑94 (MQ=60)
AATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACT > SRR4302537.5826109/1‑94 (MQ=60)
AATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACT < SRR4302537.4939789/94‑1 (MQ=60)
AATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACT > SRR4302537.4856087/1‑94 (MQ=60)
AATAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACT < SRR4302537.3025587/94‑1 (MQ=60)
TAAAACCAGCAATGATCGTCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGC < SRR4302537.939400/94‑1 (MQ=60)
TAAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGC < SRR4302537.950943/94‑1 (MQ=60)
AAAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCG > SRR4302537.1460110/1‑94 (MQ=60)
AAACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGTAAAGTTCTGGATACTGCCGAGAGACGCAGTCAAGCGGGAAGCAACTacgc > SRR4302537.6419541/1‑90 (MQ=60)
AACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGAC > SRR4302537.3832461/1‑94 (MQ=60)
AACCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGAC < SRR4302537.3599238/94‑1 (MQ=60)
CCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGT > SRR4302537.975178/1‑94 (MQ=60)
CCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGT < SRR4302537.1092500/94‑1 (MQ=60)
CCAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGT < SRR4302537.5478906/94‑1 (MQ=60)
CAGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTG < SRR4302537.234746/94‑1 (MQ=60)
CAGCAATGAGCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTGCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTG < SRR4302537.3342061/94‑1 (MQ=60)
AGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGG > SRR4302537.2241638/1‑94 (MQ=60)
AGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGG > SRR4302537.161378/1‑94 (MQ=60)
AGCAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGG < SRR4302537.4061455/94‑1 (MQ=60)
CAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGGAT > SRR4302537.4031478/1‑94 (MQ=60)
CAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGGAT > SRR4302537.6241514/1‑94 (MQ=60)
|
GGAAGATGTACGCCAGTGCCCCCGCTGCGGTGACGCAACCGCAGATGATTAGTGCCAGACGGAATGAGTGGGTGGTATCAACAATAAAACCAGTAATGATCGGCGCAAAAGAGGCGCAGATGAAGCTGGCAAAGTTCTGGATACTGCCCACCGACGCAGTCATGCGAGAAGCAACTGCGACGTGGAT > NC_000913/4590969‑4591155
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
