Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,729,373 |
+C |
intergenic (‑195/+247) |
rrsG ← / ← clpB |
16S ribosomal RNA/ClpB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,729,371 | 1 | . | C | 100.0%
| 577.9
/ NA
| 180 | intergenic (‑193/+249) | rrsG/clpB | 16S ribosomal RNA/ClpB |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (80/100); total (80/100) |
Only 100 of 180 total aligned reads displayed.
AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGT > NC_000913/2729307‑2729457
|
aaTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCt > 1:5358103/1‑93 (MQ=0)
aaTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCt < 1:87642/93‑1 (MQ=9)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCtt > 1:6919484/1‑93 (MQ=9)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCtt > 2:3178754/1‑93 (MQ=9)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCtt < 2:5580492/93‑1 (MQ=12)
aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCtt < 2:578448/93‑1 (MQ=12)
ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCttt > 1:1414493/1‑93 (MQ=12)
ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCttt > 2:5686186/1‑93 (MQ=12)
tGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCtttt < 1:3711300/93‑1 (MQ=255)
gTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtc > 2:3786058/1‑93 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtctc < 1:1153892/93‑1 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtctc < 1:3464280/93‑1 (MQ=255)
tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtctc < 2:1761600/93‑1 (MQ=255)
aaGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg < 1:2336716/93‑1 (MQ=255)
aaGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg > 1:5121234/1‑93 (MQ=255)
agagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGt > 1:6552852/1‑93 (MQ=255)
gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt < 1:6768529/93‑1 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 1:6874715/1‑93 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 1:7133655/93‑1 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga < 2:344319/93‑1 (MQ=255)
gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga > 1:3785615/1‑93 (MQ=255)
aGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga < 2:2605656/93‑1 (MQ=255)
aGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga < 1:2431876/93‑1 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt > 1:6224565/1‑93 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt < 1:2047129/93‑1 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt > 2:5574056/1‑93 (MQ=255)
gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt < 2:6685127/93‑1 (MQ=255)
tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt < 2:6329960/93‑1 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc > 2:2722918/1‑93 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc < 2:4607160/93‑1 (MQ=255)
gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc < 1:7362313/93‑1 (MQ=255)
ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct < 2:1188082/93‑1 (MQ=255)
ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct > 1:4268258/1‑93 (MQ=255)
ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct < 1:2626863/93‑1 (MQ=255)
ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct < 1:2168573/93‑1 (MQ=255)
cgcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtctc > 2:2518422/1‑93 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa < 1:7436627/93‑1 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa > 2:1625906/1‑93 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa > 2:5010553/1‑93 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa > 2:7496181/1‑93 (MQ=255)
gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa < 2:2846562/93‑1 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:5672327/93‑1 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 2:1377572/93‑1 (MQ=255)
cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg < 1:867379/93‑1 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg > 2:6300581/1‑93 (MQ=255)
ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg > 2:4471138/1‑93 (MQ=255)
tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga > 1:6744130/1‑93 (MQ=255)
tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga < 1:4012444/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 1:6202413/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 1:3869414/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga < 2:1304246/93‑1 (MQ=255)
gcttTTTCTCAGCGGCGCGGGGGGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga > 1:4790856/1‑93 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa > 1:1694774/1‑93 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 2:7248913/93‑1 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 2:7197107/93‑1 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 2:4226527/93‑1 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 1:4619417/93‑1 (MQ=255)
cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa < 1:5271891/93‑1 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 1:4635588/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 2:607888/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 1:3113267/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 1:430101/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 1:3340784/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc > 1:3417576/1‑93 (MQ=255)
tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc < 2:278425/93‑1 (MQ=255)
ttttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcc < 2:2702870/93‑1 (MQ=255)
tttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAccc > 1:1982258/1‑93 (MQ=255)
ttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc > 1:438584/1‑93 (MQ=255)
ttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc < 2:234800/93‑1 (MQ=255)
ttCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc < 1:4317092/93‑1 (MQ=255)
aGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGa < 1:6732332/93‑1 (MQ=255)
gcggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAc < 1:2132754/93‑1 (MQ=255)
gcggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAc < 2:2316591/93‑1 (MQ=255)
cggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc < 1:421427/93‑1 (MQ=255)
cggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc > 1:7087513/1‑93 (MQ=255)
cggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAcc < 1:230627/93‑1 (MQ=255)
ggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAccc < 1:1958122/93‑1 (MQ=255)
ggcgCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAccc < 2:4549989/93‑1 (MQ=255)
gcgcGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcg > 2:2109993/1‑93 (MQ=255)
cgcgGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg > 1:5584722/1‑93 (MQ=255)
cgGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcg < 2:5527053/93‑1 (MQ=255)
cgGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcg > 2:186184/1‑93 (MQ=255)
ggggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCcggcgg < 1:6062715/93‑1 (MQ=255)
ggggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg < 1:4993805/93‑1 (MQ=255)
ggggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg > 1:7193127/1‑93 (MQ=255)
ggggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg > 1:3550684/1‑93 (MQ=255)
gggTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCggcggc > 2:6264050/1‑93 (MQ=255)
tgtgCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg > 2:3123994/1‑93 (MQ=255)
tgCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt < 2:5622759/93‑1 (MQ=255)
tgCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt < 1:4117580/93‑1 (MQ=255)
gCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGttt > 1:3784502/1‑93 (MQ=255)
gCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGttt > 2:7024373/1‑93 (MQ=255)
cATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg > 1:246400/1‑93 (MQ=255)
cATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg < 2:3291598/93‑1 (MQ=255)
ataataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGc > 2:7034557/1‑93 (MQ=255)
taataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc > 1:5139141/1‑93 (MQ=255)
taataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGcc > 1:293373/1‑93 (MQ=255)
ataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgt > 1:6310160/1‑93 (MQ=255)
aCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttg < 2:3650980/93‑1 (MQ=255)
aCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttg > 2:1685660/1‑93 (MQ=255)
|
AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTT‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGT > NC_000913/2729307‑2729457
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTT‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > NC_000913/2729280‑2729466
|
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTT‑CC > SRR4302542.6534385/1‑94 (MQ=0)
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTT‑CC < SRR4302542.4707343/94‑1 (MQ=0)
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTT‑CC < SRR4302542.3068901/94‑1 (MQ=0)
AATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTT > SRR4302542.178586/1‑94 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTT > SRR4302542.1426719/1‑94 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTT > SRR4302542.917955/1‑94 (MQ=0)
ATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTT < SRR4302542.4234552/94‑1 (MQ=0)
TTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTT < SRR4302542.5537551/94‑1 (MQ=0)
TGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTC > SRR4302542.4741327/1‑94 (MQ=2)
TGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTC < SRR4302542.3748014/94‑1 (MQ=2)
GTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCT > SRR4302542.5687415/1‑94 (MQ=5)
GTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCT < SRR4302542.6979453/94‑1 (MQ=5)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT < SRR4302542.1163781/94‑1 (MQ=10)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT < SRR4302542.2058252/94‑1 (MQ=10)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT < SRR4302542.3496726/94‑1 (MQ=10)
TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCT < SRR4302542.6707278/94‑1 (MQ=10)
AAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTG < SRR4302542.4351031/94‑1 (MQ=12)
AAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTG > SRR4302542.5170967/1‑94 (MQ=12)
AAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGT > SRR4302542.5088494/1‑94 (MQ=20)
AAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGT > SRR4302542.6617453/1‑94 (MQ=20)
AAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGT < SRR4302542.2356730/94‑1 (MQ=20)
AGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTT < SRR4302542.3540943/94‑1 (MQ=22)
AGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTT > SRR4302542.4652412/1‑94 (MQ=22)
GAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTG < SRR4302542.6835087/94‑1 (MQ=25)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA > SRR4302542.3823057/1‑94 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA < SRR4302542.6282450/94‑1 (MQ=27)
AGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGA > SRR4302542.6942246/1‑94 (MQ=27)
GCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAG < SRR4302542.7238345/94‑1 (MQ=29)
GCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAG < SRR4302542.7203663/94‑1 (MQ=29)
AGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAT < SRR4302542.2455541/94‑1 (MQ=34)
AGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAT < SRR4302542.5004117/94‑1 (MQ=34)
AGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAT > SRR4302542.6285863/1‑94 (MQ=34)
GTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATT < SRR4302542.2064823/94‑1 (MQ=37)
GTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATT < SRR4302542.3773976/94‑1 (MQ=37)
GCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCT < SRR4302542.7434424/94‑1 (MQ=42)
GCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCT > SRR4302542.4310264/1‑94 (MQ=42)
CCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTC < SRR4302542.2652241/94‑1 (MQ=44)
CCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTC < SRR4302542.2187247/94‑1 (MQ=44)
GGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCA > SRR4302542.2423241/1‑94 (MQ=46)
CGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCA > SRR4302542.4325870/1‑94 (MQ=47)
CGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCA < SRR4302542.7099364/94‑1 (MQ=47)
GCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAG > SRR4302542.6814975/1‑94 (MQ=49)
GCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAG < SRR4302542.7509414/94‑1 (MQ=49)
CTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302542.7496455/94‑1 (MQ=51)
CTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302542.874855/94‑1 (MQ=51)
CTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGG < SRR4302542.5727419/94‑1 (MQ=51)
TTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGA < SRR4302542.3482795/94‑1 (MQ=54)
TTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGA > SRR4302542.6810496/1‑94 (MQ=54)
TCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAG < SRR4302542.4052038/94‑1 (MQ=56)
TCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAG < SRR4302542.3846872/94‑1 (MQ=56)
CGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGA < SRR4302542.7399568/94‑1 (MQ=59)
CGCTTTTTCTCAGCGGCGC‑GGGGGGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGA > SRR4302542.4837540/1‑94 (MQ=56)
GCTTTTTCTCAGCGGCGCGGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGA > SRR4302542.3673234/1‑94 (MQ=55)
GCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAA < SRR4302542.3907646/94‑1 (MQ=60)
GCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAA > SRR4302542.1709459/1‑94 (MQ=60)
GCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAA < SRR4302542.6263172/94‑1 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC < SRR4302542.5323117/94‑1 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC > SRR4302542.433815/1‑94 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC > SRR4302542.3142844/1‑94 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC > SRR4302542.3449596/1‑94 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC > SRR4302542.3372226/1‑94 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC < SRR4302542.4664545/94‑1 (MQ=60)
CTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAC > SRR4302542.4680886/1‑94 (MQ=60)
TTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACC > SRR4302542.3009655/1‑94 (MQ=60)
TTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACC > SRR4302542.2807563/1‑94 (MQ=60)
TTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCC > SRR4302542.1999366/1‑94 (MQ=60)
TTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCC > SRR4302542.442382/1‑94 (MQ=60)
TTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCG < SRR4302542.1473522/94‑1 (MQ=60)
TTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCG < SRR4302542.4359503/94‑1 (MQ=60)
TTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCG < SRR4302542.4412615/94‑1 (MQ=60)
TCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGC > SRR4302542.3192283/1‑94 (MQ=60)
TCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGC < SRR4302542.6417308/94‑1 (MQ=60)
AGCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAC < SRR4302542.6798600/94‑1 (MQ=60)
GCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACC < SRR4302542.2151157/94‑1 (MQ=60)
GCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACC > SRR4302542.778303/1‑94 (MQ=60)
GCGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACC > SRR4302542.7157055/1‑94 (MQ=60)
CGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCC < SRR4302542.425046/94‑1 (MQ=60)
CGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCC < SRR4302542.232607/94‑1 (MQ=60)
CGGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCC < SRR4302542.3927358/94‑1 (MQ=60)
GGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCG < SRR4302542.1992832/94‑1 (MQ=60)
GGCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCG < SRR4302542.1975063/94‑1 (MQ=60)
GCGC‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGG > SRR4302542.5638992/1‑94 (MQ=60)
C‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGG > SRR4302542.6938729/1‑94 (MQ=60)
C‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGG > SRR4302542.7263714/1‑94 (MQ=60)
C‑GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGG > SRR4302542.3583876/1‑94 (MQ=60)
GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCCGGCGGC < SRR4302542.6121398/94‑1 (MQ=60)
GGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGC < SRR4302542.5042316/94‑1 (MQ=60)
GTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTG > SRR4302542.2526074/1‑94 (MQ=60)
TGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTT > SRR4302542.2282838/1‑94 (MQ=60)
TGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTT > SRR4302542.3821936/1‑94 (MQ=60)
TGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTT < SRR4302542.4158144/94‑1 (MQ=60)
TGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTT > SRR4302542.4070638/1‑94 (MQ=60)
GCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTG > SRR4302542.5355564/1‑94 (MQ=60)
GCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTG > SRR4302542.248510/1‑94 (MQ=60)
ATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC > SRR4302542.2176716/1‑94 (MQ=60)
ATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC > SRR4302542.5189092/1‑94 (MQ=60)
ATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCC > SRR4302542.295935/1‑94 (MQ=60)
AATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGT > SRR4302542.6372332/1‑94 (MQ=60)
ATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTT > SRR4302542.6294173/1‑94 (MQ=60)
ATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTT < SRR4302542.2327962/94‑1 (MQ=60)
ACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGT < SRR4302542.6088323/94‑1 (MQ=60)
GCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTC > SRR4302542.2362423/1‑94 (MQ=60)
CCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC < SRR4302542.180493/94‑1 (MQ=60)
CCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCC < SRR4302542.4063255/94‑1 (MQ=60)
CTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302542.1821936/1‑94 (MQ=60)
CTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302542.6764642/1‑94 (MQ=60)
CTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG < SRR4302542.3592849/94‑1 (MQ=60)
CTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302542.7448784/1‑94 (MQ=60)
CTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCG > SRR4302542.3683601/1‑94 (MQ=60)
TC‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTG < SRR4302542.2159897/94‑1 (MQ=60)
C‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT < SRR4302542.291808/94‑1 (MQ=60)
C‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT < SRR4302542.6299411/94‑1 (MQ=60)
C‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT > SRR4302542.4936698/1‑94 (MQ=60)
CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA < SRR4302542.320568/94‑1 (MQ=60)
|
TTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGGTGTGCATAATACGCCTT‑CCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCA > NC_000913/2729280‑2729466
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
