Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,744,244 G→A intergenic (‑39/+210) rpsP ← / ← ffh 30S ribosomal subunit protein S16/FFh

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,744,2440GA78.5% 800.4 / 171.0 340intergenic (‑39/+210)rpsP/ffh30S ribosomal subunit protein S16/FFh
Reads supporting (aligned to +/- strand):  ref base G (44/29);  new base A (119/148);  total (163/177)
Fisher's exact test for biased strand distribution p-value = 2.42e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01

Only 100 of 342 total aligned reads displayed.

CTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAG  >  NC_000913/2744152‑2744336
                                                                                            |                                                                                            
cTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCg                                                                                              >  2:3750945/1‑93 (MQ=255)
    tAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGa                                                                                          <  1:6708418/93‑1 (MQ=255)
    tAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGa                                                                                          <  1:2696173/93‑1 (MQ=255)
     aGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGaa                                                                                         <  1:5568075/93‑1 (MQ=255)
      gAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAc                                                                                        >  1:1785768/1‑93 (MQ=255)
      gAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAc                                                                                        >  1:5551414/1‑93 (MQ=255)
            aCGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTc                                                                                  <  2:5994496/93‑1 (MQ=255)
              gCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCg                                                                                >  2:5450903/1‑93 (MQ=255)
               cTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCgg                                                                               <  2:6515971/93‑1 (MQ=255)
                tttttAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGgt                                                                              >  2:5923674/1‑93 (MQ=255)
                 ttttAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGgtg                                                                             >  1:1024938/1‑93 (MQ=255)
                 ttttAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGgtg                                                                             >  1:894853/1‑93 (MQ=255)
                   ttAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTc                                                                           <  1:5411080/93‑1 (MQ=255)
                    tAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCa                                                                          >  2:1910455/1‑93 (MQ=255)
                      gcgcCGTGACGTGCTAAACGAATAGTTACCGTAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCata                                                                        <  2:7433372/93‑1 (MQ=255)
                      gcgcCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCata                                                                        <  2:676967/93‑1 (MQ=255)
                      gcgcCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCata                                                                        >  2:6680684/1‑93 (MQ=255)
                      gcgcCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCata                                                                        <  1:4468879/93‑1 (MQ=255)
                       cgcCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCatat                                                                       <  1:5920779/93‑1 (MQ=255)
                        gcCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATAtt                                                                      >  2:2710667/1‑93 (MQ=255)
                         ccGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTa                                                                     <  2:6967020/93‑1 (MQ=255)
                          cGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTaa                                                                    >  2:6918585/1‑93 (MQ=255)
                          cGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaa                                                                    >  2:4918732/1‑93 (MQ=255)
                           gTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaaa                                                                   <  2:6641271/93‑1 (MQ=255)
                           gTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaaa                                                                   <  1:6062031/93‑1 (MQ=255)
                           gTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaaa                                                                   >  2:7119138/1‑93 (MQ=255)
                           gTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaaa                                                                   <  2:4155977/93‑1 (MQ=255)
                           gTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGACGTCCGGTGTCATATTaaa                                                                   >  2:3326377/1‑93 (MQ=255)
                            tGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTaaaa                                                                  <  2:6362783/93‑1 (MQ=255)
                             gACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAg                                                                 >  1:3027966/1‑93 (MQ=255)
                               cGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGcc                                                               <  1:491926/93‑1 (MQ=255)
                                 tGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCg                                                             >  1:7133489/1‑93 (MQ=255)
                                    tAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGaaa                                                          >  1:1945456/1‑93 (MQ=255)
                                    tAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGaaa                                                          >  2:5630439/1‑93 (MQ=255)
                                    tAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGaaa                                                          >  1:2527598/1‑93 (MQ=255)
                                      aaCGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAt                                                        >  2:643451/1‑93 (MQ=255)
                                      aaCGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAt                                                        <  1:3238776/93‑1 (MQ=255)
                                       aCGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAtt                                                       >  2:3951671/1‑93 (MQ=255)
                                       aCGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAtt                                                       >  1:2282881/1‑93 (MQ=255)
                                       aCGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAtt                                                       <  1:2908463/93‑1 (MQ=255)
                                        cGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAttt                                                      <  1:2087118/93‑1 (MQ=255)
                                        cGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAttt                                                      <  2:1162704/93‑1 (MQ=255)
                                         gAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAAtttt                                                     >  1:4029938/1‑93 (MQ=255)
                                          aaTAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTa                                                    <  1:2782978/93‑1 (MQ=255)
                                           aTAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTAc                                                   >  2:855634/1‑93 (MQ=255)
                                            tAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACt                                                  <  1:4191325/93‑1 (MQ=255)
                                              gTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCa                                                <  2:2363106/93‑1 (MQ=255)
                                               ttACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAt                                               <  2:2639392/93‑1 (MQ=255)
                                                tACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAtt                                              <  1:5624092/93‑1 (MQ=255)
                                                tACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAtt                                              <  1:5835867/93‑1 (MQ=255)
                                                tACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAtt                                              <  2:144371/93‑1 (MQ=255)
                                                 aCCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAttt                                             >  2:4835187/1‑93 (MQ=255)
                                                 aCCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAttt                                             >  1:3934840/1‑93 (MQ=255)
                                                  ccATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAtttt                                            <  1:6546637/93‑1 (MQ=255)
                                                  ccATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAtttt                                            <  2:337500/93‑1 (MQ=255)
                                                   cATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTTCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAttttt                                           <  1:4849558/93‑1 (MQ=255)
                                                    aTAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTg                                          <  1:1194068/93‑1 (MQ=255)
                                                     tAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGc                                         >  2:5070426/1‑93 (MQ=255)
                                                      aaCATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCg                                        >  2:3130888/1‑93 (MQ=255)
                                                          tCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGaa                                    >  1:6217125/1‑93 (MQ=255)
                                                          tCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGaa                                    <  2:1761155/93‑1 (MQ=255)
                                                          cccTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGaa                                    <  1:3719883/92‑1 (MQ=255)
                                                           ccTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTATCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAt                                   >  2:7256923/1‑93 (MQ=255)
                                                            ctctTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAtt                                  <  2:1671499/93‑1 (MQ=255)
                                                            ctctTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAtt                                  <  2:5291522/93‑1 (MQ=255)
                                                             tctTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTg                                 >  1:6364371/1‑93 (MQ=255)
                                                              ctTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGc                                <  1:3185989/93‑1 (MQ=255)
                                                              ctTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGc                                <  1:3481322/93‑1 (MQ=255)
                                                               ttGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCa                               >  1:1471194/1‑93 (MQ=255)
                                                                tgtgtgAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCaa                              >  1:5992144/1‑93 (MQ=255)
                                                                tgtgtgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCaa                              <  1:369401/93‑1 (MQ=255)
                                                                 gtgtgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAt                             <  2:5805184/93‑1 (MQ=255)
                                                                 gtgtgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAt                             >  2:3179831/1‑93 (MQ=255)
                                                                 gtgtgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAt                             >  1:7490625/1‑93 (MQ=255)
                                                                   gtgAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCa                           >  2:3701952/1‑93 (MQ=255)
                                                                    tgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCaa                          >  2:2067485/1‑93 (MQ=255)
                                                                    tgAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCaa                          <  1:6983719/93‑1 (MQ=255)
                                                                     gAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAc                         >  2:24120/1‑93 (MQ=255)
                                                                     gAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAc                         >  1:2157872/1‑93 (MQ=255)
                                                                     gAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAc                         <  2:1296004/93‑1 (MQ=255)
                                                                     gAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAc                         <  1:7209788/93‑1 (MQ=255)
                                                                      aaTAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACa                        <  1:1373499/93‑1 (MQ=255)
                                                                      aaTAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACa                        <  2:790029/93‑1 (MQ=255)
                                                                      aaTAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACa                        >  1:6812525/1‑93 (MQ=255)
                                                                       aTAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAg                       >  1:6652607/1‑93 (MQ=255)
                                                                        tAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGt                      <  2:4459875/93‑1 (MQ=255)
                                                                        tAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGt                      >  2:3484545/1‑93 (MQ=255)
                                                                         aaaaCAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGtt                     <  1:3583692/93‑1 (MQ=255)
                                                                           aacaacCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGc                   >  2:4603262/1‑93 (MQ=255)
                                                                              aacCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTaa                <  1:1287837/93‑1 (MQ=255)
                                                                               acCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAAc               <  2:4402655/93‑1 (MQ=255)
                                                                               acCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAAc               <  2:3674685/93‑1 (MQ=255)
                                                                                 cGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAActc             <  1:3367853/93‑1 (MQ=255)
                                                                                    aCCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTctgc          >  1:3838609/1‑93 (MQ=255)
                                                                                    aCCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTctgc          <  1:378482/93‑1 (MQ=255)
                                                                                    aCCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTctgc          <  2:6108338/93‑1 (MQ=255)
                                                                                     ccccATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTctgct         <  2:4749715/93‑1 (MQ=255)
                                                                                     ccccATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTctgct         >  1:7286256/1‑93 (MQ=255)
                                                                                        cATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTa      >  1:5086474/1‑93 (MQ=255)
                                                                                         aTCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTaa     >  2:5155774/1‑93 (MQ=255)
                                                                                            |                                                                                            
CTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAG  >  NC_000913/2744152‑2744336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  >  NC_000913/2744151‑2744337
                                                                                             |                                                                                             
CCTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCA                                                                                               <  SRR4302542.6943813/94‑1 (MQ=60)
CCTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCA                                                                                               <  SRR4302542.4641549/94‑1 (MQ=60)
  TGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAG                                                                                             <  SRR4302542.7126027/94‑1 (MQ=60)
    GTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGA                                                                                           <  SRR4302542.5967014/94‑1 (MQ=60)
     TAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAA                                                                                          <  SRR4302542.6774507/94‑1 (MQ=60)
     TAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAA                                                                                          >  SRR4302542.2762036/1‑94 (MQ=60)
     TAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAA                                                                                          <  SRR4302542.2722172/94‑1 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         <  SRR4302542.260926/94‑1 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         <  SRR4302542.5622178/94‑1 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         >  SRR4302542.5605355/1‑94 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         <  SRR4302542.2711725/94‑1 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         >  SRR4302542.5145051/1‑94 (MQ=60)
      AGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAAC                                                                                         >  SRR4302542.1801262/1‑94 (MQ=60)
       GAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACG                                                                                        >  SRR4302542.2044057/1‑94 (MQ=60)
        AACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGG                                                                                       >  SRR4302542.7147784/1‑94 (MQ=60)
         ACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGA                                                                                      <  SRR4302542.5292119/94‑1 (MQ=60)
         ACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGA                                                                                      <  SRR4302542.6779221/94‑1 (MQ=60)
          ccggacCTTTTTAGCGGCGGGGCGTGGTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAG                                                                                     <  SRR4302542.6146736/88‑1 (MQ=60)
          CGGACGCTTTTTAGCGCTGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAG                                                                                     <  SRR4302542.7054833/94‑1 (MQ=60)
          CGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAG                                                                                     <  SRR4302542.6115838/94‑1 (MQ=60)
          CGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAG                                                                                     >  SRR4302542.3357656/1‑94 (MQ=60)
          CGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAG                                                                                     <  SRR4302542.6742584/94‑1 (MQ=60)
           GGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGT                                                                                    <  SRR4302542.1418357/94‑1 (MQ=60)
           GGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGT                                                                                    <  SRR4302542.2152256/94‑1 (MQ=60)
              CGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCG                                                                                 >  SRR4302542.7466971/1‑94 (MQ=60)
              CGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCG                                                                                 <  SRR4302542.6735525/94‑1 (MQ=60)
              CGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCG                                                                                 <  SRR4302542.7355090/94‑1 (MQ=60)
               GCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGG                                                                                <  SRR4302542.1831163/94‑1 (MQ=60)
                CTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGT                                                                               >  SRR4302542.1945664/1‑94 (MQ=60)
                 TTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTG                                                                              >  SRR4302542.902603/1‑94 (MQ=60)
                 TTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTG                                                                              >  SRR4302542.1033769/1‑94 (MQ=60)
                 TTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTG                                                                              <  SRR4302542.7355956/94‑1 (MQ=60)
                 TTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTG                                                                              >  SRR4302542.1266929/1‑94 (MQ=60)
                  TTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGT                                                                             >  SRR4302542.5993686/1‑94 (MQ=60)
                  TTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGT                                                                             <  SRR4302542.3555401/94‑1 (MQ=60)
                   TTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTC                                                                            >  SRR4302542.6842291/1‑94 (MQ=60)
                    TTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCA                                                                           <  SRR4302542.5463637/94‑1 (MQ=60)
                     TAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCAT                                                                          <  SRR4302542.4047451/94‑1 (MQ=60)
                       GCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATAT                                                                        <  SRR4302542.7383531/94‑1 (MQ=60)
                       GCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATAT                                                                        <  SRR4302542.4512716/94‑1 (MQ=60)
                        CGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATT                                                                       <  SRR4302542.2179009/94‑1 (MQ=60)
                        CGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATT                                                                       <  SRR4302542.5978153/94‑1 (MQ=60)
                          CCGTGACGTGCTAAACAAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAA                                                                     >  SRR4302542.5554057/1‑94 (MQ=60)
                           CGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACACCCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAA                                                                    <  SRR4302542.6283494/94‑1 (MQ=60)
                           CGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAA                                                                    <  SRR4302542.6615118/94‑1 (MQ=60)
                           CGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAA                                                                    >  SRR4302542.2729662/1‑94 (MQ=60)
                           CGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAA                                                                    <  SRR4302542.5662887/94‑1 (MQ=60)
                           CGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAA                                                                    <  SRR4302542.6902650/94‑1 (MQ=60)
                            GTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAA                                                                   <  SRR4302542.319821/94‑1 (MQ=60)
                            GTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAA                                                                   <  SRR4302542.7237751/94‑1 (MQ=60)
                            GTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAA                                                                   <  SRR4302542.6398796/94‑1 (MQ=60)
                            GTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAA                                                                   <  SRR4302542.6120707/94‑1 (MQ=60)
                            GTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAA                                                                   <  SRR4302542.2786722/94‑1 (MQ=60)
                             TGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAG                                                                  >  SRR4302542.3056866/1‑94 (MQ=60)
                              GACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGC                                                                 <  SRR4302542.5913374/94‑1 (MQ=60)
                               ACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCC                                                                <  SRR4302542.4718532/94‑1 (MQ=60)
                                CGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCC                                                               <  SRR4302542.496169/94‑1 (MQ=60)
                                 GTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCG                                                              <  SRR4302542.4227563/94‑1 (MQ=60)
                                 GTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCG                                                              >  SRR4302542.1706499/1‑94 (MQ=60)
                                 GTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCG                                                              >  SRR4302542.7203495/1‑94 (MQ=60)
                                   GCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAA                                                            >  SRR4302542.3864883/1‑94 (MQ=60)
                                   GCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAA                                                            >  SRR4302542.7326752/1‑94 (MQ=60)
                                    CTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAA                                                           >  SRR4302542.1962283/1‑94 (MQ=60)
                                    CTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAA                                                           >  SRR4302542.4584492/1‑94 (MQ=60)
                                    CTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAA                                                           >  SRR4302542.4052160/1‑94 (MQ=60)
                                    CTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAA                                                           >  SRR4302542.5608565/1‑94 (MQ=60)
                                    CTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAA                                                           >  SRR4302542.2552113/1‑94 (MQ=60)
                                       AACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATT                                                        <  SRR4302542.3269389/94‑1 (MQ=60)
                                       AACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATT                                                        >  SRR4302542.2302499/1‑94 (MQ=60)
                                       AACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATT                                                        >  SRR4302542.3075790/1‑94 (MQ=60)
                                        ACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTT                                                       <  SRR4302542.2936355/94‑1 (MQ=60)
                                         CGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTT                                                      >  SRR4302542.6591425/1‑94 (MQ=60)
                                         CGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTT                                                      >  SRR4302542.5700623/1‑94 (MQ=60)
                                         CGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTT                                                      >  SRR4302542.4069706/1‑94 (MQ=60)
                                         CGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTT                                                      <  SRR4302542.2105134/94‑1 (MQ=60)
                                         CGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTT                                                      <  SRR4302542.2440269/94‑1 (MQ=60)
                                          GAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTA                                                     >  SRR4302542.2135357/1‑94 (MQ=60)
                                          GAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTA                                                     >  SRR4302542.3963520/1‑94 (MQ=60)
                                          GAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTA                                                     >  SRR4302542.6473741/1‑94 (MQ=60)
                                           AATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTAC                                                    <  SRR4302542.2809774/94‑1 (MQ=60)
                                           AATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTAC                                                    <  SRR4302542.1632776/94‑1 (MQ=60)
                                            ATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACT                                                   >  SRR4302542.76416/1‑94 (MQ=60)
                                             TAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTC                                                  <  SRR4302542.4232655/94‑1 (MQ=60)
                                             TAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTC                                                  <  SRR4302542.2982391/94‑1 (MQ=60)
                                              AGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCA                                                 >  SRR4302542.3730914/1‑94 (MQ=60)
                                               GTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCAT                                                <  SRR4302542.4943618/94‑1 (MQ=60)
                                                 TACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTT                                              >  SRR4302542.3973661/1‑94 (MQ=60)
                                                 TACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTT                                              <  SRR4302542.5892483/94‑1 (MQ=60)
                                                 TACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTT                                              <  SRR4302542.5678713/94‑1 (MQ=60)
                                                  ACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTT                                             >  SRR4302542.389189/1‑94 (MQ=60)
                                                  ACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTT                                             >  SRR4302542.3103698/1‑94 (MQ=60)
                                                  ACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTT                                             <  SRR4302542.5994008/94‑1 (MQ=60)
                                                   CCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTT                                            >  SRR4302542.2005289/1‑94 (MQ=60)
                                                   CCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTT                                            <  SRR4302542.3613318/94‑1 (MQ=60)
                                                   CCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTT                                            >  SRR4302542.3263294/1‑94 (MQ=60)
                                                   CCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTT                                            <  SRR4302542.6611192/94‑1 (MQ=60)
                                                   CCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTT                                            >  SRR4302542.4971394/1‑94 (MQ=60)
                                                    CATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTG                                           >  SRR4302542.6176905/1‑94 (MQ=60)
                                                    CATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTTCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTG                                           <  SRR4302542.4896781/94‑1 (MQ=60)
                                                    CATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTG                                           >  SRR4302542.3959104/1‑94 (MQ=60)
                                                    CATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTNN                                           >  SRR4302542.1249739/1‑94 (MQ=60)
                                                     ATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGC                                          <  SRR4302542.1204348/94‑1 (MQ=60)
                                                       AACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGATCGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGG                                        <  SRR4302542.4916761/94‑1 (MQ=60)
                                                        ACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGG                                       <  SRR4302542.5678240/94‑1 (MQ=60)
                                                         CATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGA                                      >  SRR4302542.1119851/1‑94 (MQ=60)
                                                         CATCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGA                                      >  SRR4302542.4070293/1‑94 (MQ=60)
                                                          ATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAaaccccaaaaattttttttttttttttttt                                     >  SRR4302542.7016817/1‑64 (MQ=60)
                                                          ATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAA                                     >  SRR4302542.6278364/1‑94 (MQ=60)
                                                           TCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAT                                    >  SRR4302542.216117/1‑94 (MQ=60)
                                                           TCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAT                                    <  SRR4302542.2249710/94‑1 (MQ=60)
                                                           CCCTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAAT                                    <  SRR4302542.3756685/94‑1 (MQ=60)
                                                             CTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTG                                  <  SRR4302542.2432838/94‑1 (MQ=60)
                                                             CTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTG                                  <  SRR4302542.5901005/94‑1 (MQ=60)
                                                             CTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTG                                  >  SRR4302542.5614321/1‑94 (MQ=60)
                                                             CTCTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTG                                  >  SRR4302542.6427045/1‑94 (MQ=60)
                                                              TCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGC                                 >  SRR4302542.6161974/1‑94 (MQ=60)
                                                               CTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCA                                <  SRR4302542.3216169/94‑1 (MQ=60)
                                                               CTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCA                                >  SRR4302542.1483896/1‑94 (MQ=60)
                                                               CTTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCA                                <  SRR4302542.3513899/94‑1 (MQ=60)
                                                                TTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAA                               >  SRR4302542.6050184/1‑94 (MQ=60)
                                                                TTGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAA                               <  SRR4302542.847404/94‑1 (MQ=60)
                                                                 TGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAT                              >  SRR4302542.3639519/1‑94 (MQ=60)
                                                                 TGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAT                              <  SRR4302542.372615/94‑1 (MQ=60)
                                                                 TGTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAAT                              >  SRR4302542.7564117/1‑94 (MQ=60)
                                                                  GTGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATC                             >  SRR4302542.2908168/1‑94 (MQ=60)
                                                                   TGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCA                            >  SRR4302542.4468053/1‑94 (MQ=60)
                                                                   TGTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCA                            <  SRR4302542.717905/94‑1 (MQ=60)
                                                                    GTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAA                           >  SRR4302542.368738/1‑94 (MQ=60)
                                                                    GTGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAA                           <  SRR4302542.1317677/94‑1 (MQ=60)
                                                                     TGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAC                          >  SRR4302542.2176453/1‑94 (MQ=60)
                                                                     TGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAC                          <  SRR4302542.7052312/94‑1 (MQ=60)
                                                                     TGAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAAC                          >  SRR4302542.3394933/1‑94 (MQ=60)
                                                                      GAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACA                         <  SRR4302542.1327987/94‑1 (MQ=60)
                                                                      GAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACA                         >  SRR4302542.6879495/1‑94 (MQ=60)
                                                                      GAATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACA                         <  SRR4302542.7280537/94‑1 (MQ=60)
                                                                       AATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAG                        <  SRR4302542.1385368/94‑1 (MQ=60)
                                                                       AATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAG                        >  SRR4302542.4912594/1‑94 (MQ=60)
                                                                       AATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAG                        >  SRR4302542.6718165/1‑94 (MQ=60)
                                                                       AATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAG                        <  SRR4302542.434702/94‑1 (MQ=60)
                                                                        ATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGT                       <  SRR4302542.6733884/94‑1 (MQ=60)
                                                                        ATAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGT                       >  SRR4302542.3786069/1‑94 (MQ=60)
                                                                         TAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTT                      >  SRR4302542.3401895/1‑94 (MQ=60)
                                                                         TAAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTT                      <  SRR4302542.1459112/94‑1 (MQ=60)
                                                                          AAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTG                     <  SRR4302542.3617121/94‑1 (MQ=60)
                                                                          AAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTG                     >  SRR4302542.3681935/1‑94 (MQ=60)
                                                                          AAAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTG                     <  SRR4302542.5423844/94‑1 (MQ=60)
                                                                           AAACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGC                    <  SRR4302542.816647/94‑1 (MQ=60)
                                                                            AACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCT                   >  SRR4302542.2551962/1‑94 (MQ=60)
                                                                            AACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCT                   >  SRR4302542.3276236/1‑94 (MQ=60)
                                                                             ACAACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTA                  <  SRR4302542.3494882/94‑1 (MQ=60)
                                                                              CAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAA                 <  SRR4302542.1786638/94‑1 (MQ=60)
                                                                              CAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAA                 <  SRR4302542.6627368/94‑1 (MQ=60)
                                                                               AACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAAC                <  SRR4302542.1298926/94‑1 (MQ=60)
                                                                               AACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAAC                <  SRR4302542.3830866/94‑1 (MQ=60)
                                                                               AACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAAC                >  SRR4302542.2880710/1‑94 (MQ=60)
                                                                                ACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACT               <  SRR4302542.5599107/94‑1 (MQ=60)
                                                                                ACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACT               <  SRR4302542.3222540/94‑1 (MQ=60)
                                                                                ACCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACT               <  SRR4302542.373959/94‑1 (MQ=60)
                                                                                 CCGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTC              <  SRR4302542.5719016/94‑1 (MQ=60)
                                                                                  CGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCT             >  SRR4302542.3033692/1‑94 (MQ=60)
                                                                                  CGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCT             <  SRR4302542.3399479/94‑1 (MQ=60)
                                                                                  CGGACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCT             <  SRR4302542.6448348/94‑1 (MQ=60)
                                                                                   GGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTG            <  SRR4302542.3784448/94‑1 (MQ=60)
                                                                                    GACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGC           >  SRR4302542.3876569/1‑94 (MQ=60)
                                                                                    GACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGC           >  SRR4302542.6150422/1‑94 (MQ=60)
                                                                                    GACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGC           <  SRR4302542.7253691/94‑1 (MQ=60)
                                                                                     ACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCT          >  SRR4302542.5073322/1‑94 (MQ=60)
                                                                                     ACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCT          >  SRR4302542.7357687/1‑94 (MQ=60)
                                                                                     ACCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCT          <  SRR4302542.381773/94‑1 (MQ=60)
                                                                                      CCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTG         <  SRR4302542.1109418/94‑1 (MQ=60)
                                                                                      CCCCATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTG         >  SRR4302542.6116332/1‑94 (MQ=60)
                                                                                        CCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTA       <  SRR4302542.5622875/94‑1 (MQ=60)
                                                                                        CCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTA       >  SRR4302542.5135908/1‑94 (MQ=60)
                                                                                         CATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAA      <  SRR4302542.1384100/94‑1 (MQ=60)
                                                                                         CATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAA      >  SRR4302542.3781801/1‑94 (MQ=60)
                                                                                          ATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAA     >  SRR4302542.4502356/1‑94 (MQ=60)
                                                                                          ATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAA     >  SRR4302542.680956/1‑94 (MQ=60)
                                                                                          ATCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAA     >  SRR4302542.7492671/1‑94 (MQ=60)
                                                                                           TCAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAA    <  SRR4302542.340215/94‑1 (MQ=60)
                                                                                            CGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAG   >  SRR4302542.6963751/1‑94 (MQ=60)
                                                                                            CAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAG   <  SRR4302542.7501518/94‑1 (MQ=60)
                                                                                            CAAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAG   <  SRR4302542.3876556/94‑1 (MQ=60)
                                                                                             AAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  <  SRR4302542.5870324/94‑1 (MQ=60)
                                                                                             AAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  <  SRR4302542.3873141/94‑1 (MQ=60)
                                                                                             AAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  <  SRR4302542.3953450/94‑1 (MQ=60)
                                                                                             AAGGAACGGAGCCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  >  SRR4302542.3801121/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCTGGTAGAACGGACGCTTTTTAGCGCCGTGACGTGCTAAACGAATAGTTACCATAACATCCTCTTGTGTGAATAAAACAACCGGACCCCATCGAGGAACGGAGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGG  >  NC_000913/2744151‑2744337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑