Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,747,389 |
Δ1 bp |
coding (572/591 nt) |
b4540 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,747,388 | 0 | C | . | 99.6%
| 1288.1
/ ‑3.8
| 279 | coding (571/591 nt) | b4540 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (136/142); minor base G (0/1); total (136/143) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 296 total aligned reads displayed.
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC > NC_000913/2747296‑2747476
|
ctTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATc < 2:4808326/93‑1 (MQ=255)
tttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATct > 1:813578/1‑92 (MQ=255)
tttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATct < 2:2078092/93‑2 (MQ=255)
ttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATctg < 2:6652399/93‑3 (MQ=255)
ttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATctg > 1:6710380/1‑91 (MQ=255)
ttGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATctg < 1:3172736/93‑3 (MQ=255)
tGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATctgg < 1:1399683/93‑4 (MQ=255)
aGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaa > 2:1023752/1‑93 (MQ=255)
gCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaa > 2:4020580/1‑93 (MQ=255)
aaaGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaaaa > 1:4821417/1‑93 (MQ=255)
aaaGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaaaa > 1:6142596/1‑93 (MQ=255)
aaaGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaaaa < 1:2762296/93‑1 (MQ=255)
aagaagAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGaaaaaa > 1:739300/1‑93 (MQ=255)
agaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAt > 2:2851416/1‑93 (MQ=255)
gaagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑TTGGAAAAAATg > 1:5491830/1‑93 (MQ=255)
aagaGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGa < 1:666204/93‑1 (MQ=255)
agagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCGATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAc < 2:4327262/93‑1 (MQ=255)
agagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAc < 2:2231100/93‑1 (MQ=255)
agagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAc < 1:2293226/93‑1 (MQ=255)
agagTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAc < 1:5748461/93‑1 (MQ=255)
ttGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGtt > 2:6093664/1‑93 (MQ=255)
tGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtg > 1:4653784/1‑93 (MQ=255)
gcgcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtga < 2:406907/93‑1 (MQ=255)
cgcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgat < 2:322143/93‑1 (MQ=255)
gcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgatg > 2:4189557/1‑93 (MQ=255)
gcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgatg < 1:1156881/93‑1 (MQ=255)
gcACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTtgatg < 1:4527835/93‑1 (MQ=255)
aCTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAc < 1:6579513/93‑1 (MQ=255)
aCTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAc > 2:1512484/1‑93 (MQ=255)
aCTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAc > 2:7504460/1‑93 (MQ=255)
cTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAca < 1:4362784/93‑1 (MQ=255)
tATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcat > 1:4949780/1‑93 (MQ=255)
tATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcat > 2:5099577/1‑93 (MQ=255)
tATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcat > 1:3504446/1‑93 (MQ=255)
aTCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatc > 1:5044757/1‑93 (MQ=255)
aTCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatc > 1:2677719/1‑93 (MQ=255)
aTCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAcatc > 2:2173266/1‑93 (MQ=255)
gTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATg > 1:1717986/1‑93 (MQ=255)
tGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATgg < 1:5212090/93‑1 (MQ=255)
cACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTg > 2:443497/1‑93 (MQ=255)
aCGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGc < 2:2987050/93‑1 (MQ=255)
aCGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGc < 2:1967731/93‑1 (MQ=255)
aCGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGc < 1:2925720/93‑1 (MQ=255)
aaTCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCcgc < 1:5842451/93‑1 (MQ=255)
cACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCa < 1:5418332/93‑1 (MQ=255)
aCGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAg < 1:5279375/93‑1 (MQ=255)
cGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGt < 2:2592652/93‑1 (MQ=255)
cGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGt < 1:3907848/93‑1 (MQ=255)
gCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTg < 1:5733717/93‑1 (MQ=255)
gCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTg > 2:2460970/1‑93 (MQ=255)
gCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTg < 1:4192268/93‑1 (MQ=255)
gCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGCGCCGCGCAGTg > 1:1628831/1‑93 (MQ=255)
cTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGa < 2:3348098/93‑1 (MQ=255)
cTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGa > 2:5890777/1‑93 (MQ=255)
tCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGaa > 1:3057004/1‑93 (MQ=255)
tCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGaa > 1:2621970/1‑93 (MQ=255)
caAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAtt < 2:1282749/93‑1 (MQ=255)
aaaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTa > 1:3590314/1‑93 (MQ=255)
aaaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTa < 1:3684273/93‑1 (MQ=255)
aaTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAt > 1:4023784/1‑93 (MQ=255)
aTTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATc < 2:4711777/93‑1 (MQ=255)
tttCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCg > 1:6191387/1‑93 (MQ=255)
tttCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCg < 1:5351702/93‑1 (MQ=255)
ttCCCGTCGCAATCAGGATATGCTGCCGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCgg < 1:1256580/93‑1 (MQ=255)
ccGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAt > 2:1453635/1‑93 (MQ=255)
cGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAtt < 2:552133/93‑1 (MQ=255)
tCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGa > 2:6791142/1‑93 (MQ=255)
tCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGa < 1:7326011/93‑1 (MQ=255)
gCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGata > 1:7003065/1‑93 (MQ=255)
gCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGata < 2:7277870/93‑1 (MQ=255)
gCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGata < 2:3582544/93‑1 (MQ=255)
cAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGatat < 1:6290945/93‑1 (MQ=255)
aaTCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATc < 2:3774282/93‑1 (MQ=255)
aTCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCa < 2:7071777/93‑1 (MQ=255)
aTCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCa > 1:2060356/1‑93 (MQ=255)
tCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCaa < 1:5176471/93‑1 (MQ=255)
aGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACg > 2:5433778/1‑93 (MQ=255)
ggATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGa < 2:4621941/93‑1 (MQ=255)
gATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAt > 1:7174849/1‑93 (MQ=255)
gATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAt > 1:148500/1‑93 (MQ=255)
tatGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGa < 2:687905/93‑1 (MQ=255)
tatGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGa > 2:1649637/1‑93 (MQ=255)
ctgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTgg < 1:207901/93‑1 (MQ=255)
tgctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGa > 2:5687599/1‑93 (MQ=255)
ctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGaaa > 2:620018/1‑93 (MQ=255)
ctgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGaaa < 2:5732752/93‑1 (MQ=255)
tgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAt > 1:1969319/1‑93 (MQ=255)
tgTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAt > 1:3766013/1‑93 (MQ=255)
gTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATc > 2:6720230/1‑93 (MQ=255)
gTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATc < 2:7124245/93‑1 (MQ=255)
cGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGa < 2:1068661/93‑1 (MQ=255)
ggTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAt < 1:1112957/93‑1 (MQ=255)
gTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAtt > 1:6471931/1‑93 (MQ=255)
gTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAtt < 2:120825/93‑1 (MQ=255)
gCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCt > 1:224072/1‑93 (MQ=255)
gCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCt > 1:2901415/1‑93 (MQ=255)
gCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCt < 1:7466979/93‑1 (MQ=255)
tCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTgn > 2:2187123/1‑92 (MQ=255)
tCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTgc > 2:2349731/1‑93 (MQ=255)
tCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTgc < 2:452289/93‑1 (MQ=255)
|
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC > NC_000913/2747296‑2747476
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > NC_000913/2747296‑2747482
|
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT < SRR4302542.8875/94‑1 (MQ=60)
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT > SRR4302542.820618/1‑94 (MQ=60)
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCT > SRR4302542.1665269/1‑94 (MQ=60)
TTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGG < SRR4302542.3202822/94‑1 (MQ=60)
TGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGA < SRR4302542.1411779/94‑1 (MQ=60)
GCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAA < SRR4302542.4786197/94‑1 (MQ=60)
CAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAA > SRR4302542.4868412/1‑94 (MQ=60)
CAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAA > SRR4302542.6202028/1‑94 (MQ=60)
AAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA < SRR4302542.2788913/94‑1 (MQ=60)
AAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA > SRR4302542.745718/1‑94 (MQ=60)
AAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA > SRR4302542.6172994/1‑94 (MQ=60)
AAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA > SRR4302542.1462352/1‑94 (MQ=60)
AAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAA > SRR4302542.6261660/1‑94 (MQ=60)
AAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT < SRR4302542.3154506/94‑1 (MQ=60)
AAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT > SRR4302542.3046011/1‑94 (MQ=60)
AAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAAT > SRR4302542.1258010/1‑94 (MQ=60)
AGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑TTGGAAAAAATG > SRR4302542.5545174/1‑94 (MQ=60)
AGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG > SRR4302542.3343731/1‑94 (MQ=60)
AGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG < SRR4302542.2196259/94‑1 (MQ=60)
AGAAGAGTGGCCCACTATCGTGCACGAATCCC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATG < SRR4302542.3634047/94‑1 (MQ=60)
GAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGA > SRR4302542.4664226/1‑94 (MQ=60)
GAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGA < SRR4302542.1607162/94‑1 (MQ=60)
AAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGAC < SRR4302542.671957/94‑1 (MQ=60)
AGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC > SRR4302542.2932178/1‑94 (MQ=60)
AGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC < SRR4302542.5804258/94‑1 (MQ=60)
AGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC < SRR4302542.2312925/94‑1 (MQ=60)
AGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACC > SRR4302542.5240034/1‑94 (MQ=60)
GAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCG < SRR4302542.2729142/94‑1 (MQ=60)
GTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTT > SRR4302542.6696007/1‑94 (MQ=60)
TTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTG > SRR4302542.4699281/1‑94 (MQ=60)
TTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTG < SRR4302542.4691535/94‑1 (MQ=60)
TGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGA < SRR4302542.7567871/94‑1 (MQ=60)
GCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGAT < SRR4302542.3204897/94‑1 (MQ=60)
CGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATG < SRR4302542.2093087/94‑1 (MQ=60)
GCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGA < SRR4302542.1166795/94‑1 (MQ=60)
GCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGA < SRR4302542.4572187/94‑1 (MQ=60)
CACTATCGTGCACGAATCACGGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGA > SRR4302542.6224932/1‑94 (MQ=60)
CACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGAC > SRR4302542.2738782/1‑94 (MQ=60)
ACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACA < SRR4302542.6644344/94‑1 (MQ=60)
CTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT < SRR4302542.4405622/94‑1 (MQ=60)
CTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT > SRR4302542.4997867/1‑94 (MQ=60)
CTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT > SRR4302542.3537227/1‑94 (MQ=60)
CTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACAT > SRR4302542.6722315/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.3913771/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.2703559/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.5093727/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.3589984/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.2943400/1‑94 (MQ=60)
TATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATC > SRR4302542.6746519/1‑94 (MQ=60)
ATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCA < SRR4302542.7363014/94‑1 (MQ=60)
CGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG < SRR4302542.972517/94‑1 (MQ=60)
CGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG < SRR4302542.5782481/94‑1 (MQ=60)
CGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG < SRR4302542.228747/94‑1 (MQ=60)
CGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATG > SRR4302542.1732905/1‑94 (MQ=60)
GTGCACGAATCAC‑TCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGG < SRR4302542.4119576/94‑1 (MQ=60)
TGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT < SRR4302542.3147956/94‑1 (MQ=60)
TGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGT < SRR4302542.5262778/94‑1 (MQ=60)
ACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCC < SRR4302542.2953745/94‑1 (MQ=60)
ACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCC < SRR4302542.7321269/94‑1 (MQ=60)
CGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCG < SRR4302542.5018340/94‑1 (MQ=60)
CGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCG > SRR4302542.2702982/1‑94 (MQ=60)
GAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGC < SRR4302542.6384237/94‑1 (MQ=60)
AATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCG < SRR4302542.5899120/94‑1 (MQ=60)
AATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCG < SRR4302542.5405353/94‑1 (MQ=60)
CAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAG < SRR4302542.5470943/94‑1 (MQ=60)
AC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGT < SRR4302542.5330707/94‑1 (MQ=60)
C‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTG < SRR4302542.3946422/94‑1 (MQ=60)
C‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGCGCCGCGCAGTG > SRR4302542.1642888/1‑94 (MQ=60)
GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGA < SRR4302542.5789359/94‑1 (MQ=60)
GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGA < SRR4302542.4233602/94‑1 (MQ=60)
CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA > SRR4302542.3086164/1‑94 (MQ=60)
CTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAA > SRR4302542.2647307/1‑94 (MQ=60)
CACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAT < SRR4302542.6379794/94‑1 (MQ=60)
CACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAAT > SRR4302542.1353130/1‑94 (MQ=60)
CAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTA > SRR4302542.1247309/1‑94 (MQ=60)
CAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTA > SRR4302542.3623796/1‑94 (MQ=60)
AAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAT < SRR4302542.3720502/94‑1 (MQ=60)
AAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTAT > SRR4302542.4063484/1‑94 (MQ=60)
ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG > SRR4302542.6251617/1‑94 (MQ=60)
ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG < SRR4302542.3859724/94‑1 (MQ=60)
ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG < SRR4302542.2270127/94‑1 (MQ=60)
ATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCG > SRR4302542.5501162/1‑94 (MQ=60)
TTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGG < SRR4302542.5403714/94‑1 (MQ=60)
TTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGG < SRR4302542.212861/94‑1 (MQ=60)
TTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGT > SRR4302542.4096606/1‑94 (MQ=60)
TTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGT < SRR4302542.5438589/94‑1 (MQ=60)
TTCCCGTCGCAATCAGGATATGCTGCCGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGT < SRR4302542.1267386/94‑1 (MQ=60)
CCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATT > SRR4302542.521380/1‑94 (MQ=60)
CGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTG < SRR4302542.5377228/94‑1 (MQ=60)
CGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTG > SRR4302542.5243326/1‑94 (MQ=60)
TCGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGAT < SRR4302542.7397776/94‑1 (MQ=60)
CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA > SRR4302542.7071854/1‑94 (MQ=60)
CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA > SRR4302542.5363529/1‑94 (MQ=60)
CGCAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATA < SRR4302542.3721787/94‑1 (MQ=60)
CAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATC < SRR4302542.6352927/94‑1 (MQ=60)
CAATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATC > SRR4302542.3770294/1‑94 (MQ=60)
AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA > SRR4302542.2078162/1‑94 (MQ=60)
AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA < SRR4302542.1407132/94‑1 (MQ=60)
AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA < SRR4302542.3639728/94‑1 (MQ=60)
AATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCA < SRR4302542.5321076/94‑1 (MQ=60)
ATCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAA > SRR4302542.2852585/1‑94 (MQ=60)
TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC < SRR4302542.5823197/94‑1 (MQ=60)
TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC < SRR4302542.5226776/94‑1 (MQ=60)
TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC < SRR4302542.6344689/94‑1 (MQ=60)
TCAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAAC < SRR4302542.5306194/94‑1 (MQ=60)
CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG > SRR4302542.6616250/1‑94 (MQ=60)
CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG > SRR4302542.197612/1‑94 (MQ=60)
CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG < SRR4302542.4970852/94‑1 (MQ=60)
CAGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACG > SRR4302542.6815949/1‑94 (MQ=60)
AGGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGA > SRR4302542.3967287/1‑94 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT > SRR4302542.7245233/1‑94 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT > SRR4302542.158053/1‑94 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT > SRR4302542.149748/1‑94 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT < SRR4302542.2063104/94‑1 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT > SRR4302542.5206533/1‑94 (MQ=60)
GGATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGAT < SRR4302542.5506844/94‑1 (MQ=60)
GATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATG < SRR4302542.5885012/94‑1 (MQ=60)
ATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGA > SRR4302542.2064083/1‑94 (MQ=60)
ATATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGA > SRR4302542.4275755/1‑94 (MQ=60)
TATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAGTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAC < SRR4302542.7564283/94‑1 (MQ=60)
TATGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGAC < SRR4302542.2095450/94‑1 (MQ=60)
TGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTG > SRR4302542.4937343/1‑94 (MQ=60)
TGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTG < SRR4302542.449653/94‑1 (MQ=60)
TGCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTG < SRR4302542.5789690/94‑1 (MQ=60)
GCTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGG > SRR4302542.4460719/1‑94 (MQ=60)
CTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGA < SRR4302542.209693/94‑1 (MQ=60)
CTGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGA > SRR4302542.3987832/1‑94 (MQ=60)
TGCTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAA > SRR4302542.6192977/1‑94 (MQ=60)
CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAT > SRR4302542.1986336/1‑94 (MQ=60)
CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAT > SRR4302542.2873657/1‑94 (MQ=60)
CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAT < SRR4302542.6592807/94‑1 (MQ=60)
CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAT > SRR4302542.3803262/1‑94 (MQ=60)
CTGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGACATCAACGATGACTGGAAAT < SRR4302542.6838536/94‑1 (MQ=60)
TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC > SRR4302542.5627902/1‑94 (MQ=60)
TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC < SRR4302542.269390/94‑1 (MQ=60)
TGTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATC < SRR4302542.4761101/94‑1 (MQ=60)
GTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCG < SRR4302542.7466370/94‑1 (MQ=60)
GTCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCG < SRR4302542.7085446/94‑1 (MQ=60)
TCGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGA < SRR4302542.169148/94‑1 (MQ=60)
CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT < SRR4302542.3613699/94‑1 (MQ=60)
CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT < SRR4302542.712688/94‑1 (MQ=60)
CGGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGAT < SRR4302542.1751172/94‑1 (MQ=60)
GGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATT < SRR4302542.1122473/94‑1 (MQ=60)
GGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATT > SRR4302542.6535695/1‑94 (MQ=60)
GGTGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATT < SRR4302542.2354072/94‑1 (MQ=60)
TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCT < SRR4302542.6764221/94‑1 (MQ=60)
TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCT > SRR4302542.2929262/1‑94 (MQ=60)
TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCT > SRR4302542.2391041/1‑94 (MQ=60)
TGCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCT > SRR4302542.226012/1‑94 (MQ=60)
GCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTG > SRR4302542.5790220/1‑94 (MQ=60)
GCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTG < SRR4302542.7540139/94‑1 (MQ=60)
GCTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTG < SRR4302542.6208396/94‑1 (MQ=60)
CTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC > SRR4302542.3053075/1‑94 (MQ=60)
CTCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGC > SRR4302542.7437734/1‑94 (MQ=60)
TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCA > SRR4302542.6795364/1‑94 (MQ=60)
TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAGCGATTCTGCG < SRR4302542.7475644/94‑1 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.4621184/1‑94 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.3160281/1‑94 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.5433635/1‑94 (MQ=60)
atCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCA > SRR4302542.57280/3‑94 (MQ=60)
atCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCA < SRR4302542.2008507/92‑1 (MQ=60)
TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAA > SRR4302542.2771762/1‑94 (MQ=60)
TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAA > SRR4302542.1345465/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > SRR4302542.5251445/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > SRR4302542.7088474/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAAC < SRR4302542.2631054/94‑1 (MQ=60)
|
CTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCAC‑GCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > NC_000913/2747296‑2747482
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
