Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,805,526 |
A→G |
D125G (GAC→GGC) |
proX → |
high‑affinity transport system for glycine betaine and proline |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,805,526 | 0 | A | G | 86.7%
| 650.6
/ 84.3
| 270 | D125G (GAC→GGC) | proX | high‑affinity transport system for glycine betaine and proline |
| Reads supporting (aligned to +/- strand): ref base A (20/16); new base G (102/132); total (122/148) |
| Fisher's exact test for biased strand distribution p-value = 2.09e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 271 total aligned reads displayed.
CGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC > NC_000913/2805434‑2805617
|
cGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGa > 1:501490/1‑93 (MQ=255)
aaGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGcc > 1:67704/1‑93 (MQ=255)
aGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCa < 2:6231301/93‑1 (MQ=255)
gCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAg < 1:1307342/93‑1 (MQ=255)
cTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGt < 1:1772001/93‑1 (MQ=255)
cTGCCGGTGGCAAT‑AGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTa < 2:209578/93‑1 (MQ=255)
tGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTTCCTGATCGAAAAGAAACCCGCCGGCCAGTa < 1:6095011/93‑1 (MQ=255)
tGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTa < 1:3359021/93‑1 (MQ=255)
gCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTAc < 1:6188422/93‑1 (MQ=255)
cGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACaa > 1:2150039/1‑93 (MQ=255)
cGGTGGCGATAAGAAATTTTATCGTGAAGGGGCATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACaa > 2:5746961/1‑93 (MQ=255)
ggTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACaaa > 2:1129495/1‑93 (MQ=255)
ggTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACaaa < 2:6834463/93‑1 (MQ=255)
gTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACaaaa < 1:4732451/93‑1 (MQ=255)
ggCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATc < 2:3316036/93‑1 (MQ=255)
cGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCAc < 1:3239408/93‑1 (MQ=255)
cGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCAc > 2:5637108/1‑93 (MQ=255)
aTAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCa < 1:4176764/93‑1 (MQ=255)
tAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCaa > 1:2036306/1‑93 (MQ=255)
tAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCaa < 2:1471963/93‑1 (MQ=255)
tAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCaa > 2:343635/1‑93 (MQ=255)
tAAGAAATTTTATCGTGAAGGGGCATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCaa > 1:1413306/1‑93 (MQ=255)
aGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACa < 1:5785306/93‑1 (MQ=255)
gAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAt < 2:609721/93‑1 (MQ=255)
gAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAt < 2:3857703/93‑1 (MQ=255)
aaTTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCg > 1:5077051/1‑93 (MQ=255)
aTTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGc > 1:7460229/1‑93 (MQ=255)
ttttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGca > 1:5442317/1‑93 (MQ=255)
ttttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGca > 1:155923/1‑93 (MQ=255)
tttATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGcac > 2:3153009/1‑93 (MQ=255)
aTCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAGCCGCCGGCCAGTACAAAATCACCAACATCGCACAAc < 1:4413249/93‑1 (MQ=255)
aTCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAAc < 2:7294453/93‑1 (MQ=255)
tCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACt < 2:4202205/93‑1 (MQ=255)
gTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGa < 2:6689579/93‑1 (MQ=255)
gTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGa < 1:3154245/93‑1 (MQ=255)
tGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGaa < 1:1035174/93‑1 (MQ=255)
tGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGaa > 2:1392566/1‑93 (MQ=255)
gAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGaaa > 2:5600743/1‑93 (MQ=255)
gAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGaaa < 1:5878206/93‑1 (MQ=255)
aaGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAg < 1:1971873/93‑1 (MQ=255)
aaGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAg > 2:6750338/1‑93 (MQ=255)
aGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGa > 2:5072390/1‑93 (MQ=255)
aGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGa > 1:7299486/1‑93 (MQ=255)
aGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGa > 1:5169940/1‑93 (MQ=255)
ggggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAt > 2:1598660/1‑93 (MQ=255)
ggggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAt < 2:1279397/93‑1 (MQ=255)
ggggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAt > 2:1901458/1‑93 (MQ=255)
ggggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAt < 2:2788608/93‑1 (MQ=255)
ggTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATcc < 2:2419138/93‑1 (MQ=255)
tATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGa > 1:4497861/1‑93 (MQ=255)
tATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGa > 1:555672/1‑93 (MQ=255)
aTTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGaa < 1:5978878/93‑1 (MQ=255)
tttGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAg > 2:7226021/1‑93 (MQ=255)
ttGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGa < 2:4082106/93‑1 (MQ=255)
tGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGAt > 2:391409/1‑93 (MQ=255)
tGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGAt > 1:2820804/1‑93 (MQ=255)
gTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATc < 1:3576167/93‑1 (MQ=255)
tAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGc > 1:4758416/1‑93 (MQ=255)
aaCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGcc < 1:1247511/93‑1 (MQ=255)
aCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCa < 2:4349404/93‑1 (MQ=255)
aCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCa > 2:931432/1‑93 (MQ=255)
aCGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCa < 2:5447916/93‑1 (MQ=255)
gcgcGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAAc < 1:6405552/93‑1 (MQ=255)
ggCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGtt < 1:4944880/93‑1 (MQ=255)
caGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAt > 1:4293689/1‑93 (MQ=255)
caGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAt > 1:3964308/1‑93 (MQ=255)
caGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAt > 1:2782650/1‑93 (MQ=255)
aGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATa > 1:7129133/1‑93 (MQ=255)
aGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATa < 2:4876093/93‑1 (MQ=255)
gggTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATAc < 1:3699589/93‑1 (MQ=255)
gTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCa > 2:3208475/1‑93 (MQ=255)
tACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAc < 2:1626512/93‑1 (MQ=255)
tACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAc < 1:3612835/93‑1 (MQ=255)
tACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAc < 2:5757334/93‑1 (MQ=255)
aCCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACg > 2:7108846/1‑93 (MQ=255)
aCCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACg < 2:4600350/93‑1 (MQ=255)
ccTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACgg < 2:5868791/93‑1 (MQ=255)
cTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGc < 2:2332331/93‑1 (MQ=255)
cTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGc > 1:6869759/1‑93 (MQ=255)
cTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGc > 1:3844987/1‑93 (MQ=255)
tGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCg > 1:112572/1‑93 (MQ=255)
tGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCg > 1:2973092/1‑93 (MQ=255)
tGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCg > 2:4671891/1‑93 (MQ=255)
gATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGa < 1:6029537/93‑1 (MQ=255)
aaGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGaaaa < 1:2693628/93‑1 (MQ=255)
aaGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGaaaa < 2:3597423/93‑1 (MQ=255)
aGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAg < 1:4220804/93‑1 (MQ=255)
aGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAg > 1:5327071/1‑93 (MQ=255)
aGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAg > 2:2894223/1‑93 (MQ=255)
gAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGc > 2:5819267/1‑93 (MQ=255)
aaaaCCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCg < 1:3936951/93‑1 (MQ=255)
aaaaCCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCg < 1:1820432/93‑1 (MQ=255)
aaaCCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCgg > 2:6328648/1‑93 (MQ=255)
aCCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAt > 1:2254325/1‑93 (MQ=255)
ccgccgGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAtt < 1:871184/93‑1 (MQ=255)
ccgccgGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAtt < 2:6167102/93‑1 (MQ=255)
cgccgGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAttt < 2:2653663/93‑1 (MQ=255)
cgccgGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAttt > 1:2406221/1‑93 (MQ=255)
cgACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTCAAc < 1:6974947/93‑1 (MQ=255)
gACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAAcc < 2:772150/93‑1 (MQ=255)
|
CGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC > NC_000913/2805434‑2805617
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGG > NC_000913/2805433‑2805619
|
ACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGG > SRR4302542.961046/1‑94 (MQ=60)
ACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGG > SRR4302542.7356959/1‑94 (MQ=60)
ACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGA > SRR4302542.505840/1‑94 (MQ=60)
GAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCC > SRR4302542.68272/1‑94 (MQ=60)
GAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACC > SRR4302542.3132847/1‑94 (MQ=60)
GCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGT < SRR4302542.1318609/94‑1 (MQ=60)
GCTGCCGGTGGCAATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGT < SRR4302542.6305384/94‑1 (MQ=60)
CTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTA > SRR4302542.5181919/1‑94 (MQ=60)
CTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTA < SRR4302542.1787361/94‑1 (MQ=60)
TGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTTCCTGATCGAAAAGAAACCCGCCGGCCAGTAC < SRR4302542.6154004/94‑1 (MQ=60)
TGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTAC < SRR4302542.3390598/94‑1 (MQ=60)
TGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTAC < SRR4302542.1885996/94‑1 (MQ=60)
GCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACA < SRR4302542.6248556/94‑1 (MQ=60)
CCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAA > SRR4302542.2168575/1‑94 (MQ=60)
GGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAA > SRR4302542.5231313/1‑94 (MQ=60)
GTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAAT < SRR4302542.4778599/94‑1 (MQ=60)
TGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATC < SRR4302542.5022250/94‑1 (MQ=60)
CGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACC > SRR4302542.1561376/1‑94 (MQ=60)
CGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACC < SRR4302542.3270026/94‑1 (MQ=60)
GATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCA < SRR4302542.777254/94‑1 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGTCTTTGTTAACGGCGCGGCACAGGGCTACCTGATCGATAAGAAAACAGCCGGCCAGGACAAAATCACCAA > SRR4302542.1269397/1‑94 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAA < SRR4302542.2008295/94‑1 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAA > SRR4302542.2053912/1‑94 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAA < SRR4302542.4217950/94‑1 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAA > SRR4302542.5025832/1‑94 (MQ=60)
ATAAGAAATTTTATCGTGAAGGGGCATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAA > SRR4302542.1425522/1‑94 (MQ=60)
AAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACA > SRR4302542.620364/1‑94 (MQ=60)
agaatttttagggggaggggttattgGTTAACGGCGCGGAACAGGGTTACCTGATAGAAAAAAAACCCGCCGGCCAGTACAAAATCACCAACAT < SRR4302542.4523946/68‑1 (MQ=40)
AGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAT < SRR4302542.5979397/94‑1 (MQ=60)
AGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAT < SRR4302542.5841475/94‑1 (MQ=60)
AGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAT > SRR4302542.7548594/1‑94 (MQ=60)
AGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACAT > SRR4302542.1830705/1‑94 (MQ=60)
GAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATC > SRR4302542.2687112/1‑94 (MQ=60)
AAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCG > SRR4302542.5126388/1‑94 (MQ=60)
AAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCG < SRR4302542.6066735/94‑1 (MQ=60)
AATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGC > SRR4302542.7533312/1‑94 (MQ=60)
AATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGC > SRR4302542.2922027/1‑94 (MQ=60)
AATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGC > SRR4302542.2840813/1‑94 (MQ=60)
ATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCA > SRR4302542.5495192/1‑94 (MQ=60)
ATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCA > SRR4302542.157246/1‑94 (MQ=60)
ATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCA > SRR4302542.611655/1‑94 (MQ=60)
TATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAAC < SRR4302542.605565/94‑1 (MQ=60)
TATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAAC < SRR4302542.5859211/94‑1 (MQ=60)
ATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAGCCGCCGGCCAGTACAAAATCACCAACATCGCACAACT < SRR4302542.4456584/94‑1 (MQ=60)
ATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACT < SRR4302542.4434032/94‑1 (MQ=60)
CGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGA > SRR4302542.2812800/1‑94 (MQ=60)
GTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAA < SRR4302542.2392038/94‑1 (MQ=60)
GTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAA > SRR4302542.5417553/1‑94 (MQ=60)
GTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAA < SRR4302542.3184196/94‑1 (MQ=60)
TGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAA < SRR4302542.1044071/94‑1 (MQ=60)
GAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAG > SRR4302542.1122872/1‑94 (MQ=60)
GAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAG < SRR4302542.6968997/94‑1 (MQ=60)
GAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAG < SRR4302542.3434283/94‑1 (MQ=60)
GAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAG < SRR4302542.900289/94‑1 (MQ=60)
GAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAG < SRR4302542.5935194/94‑1 (MQ=60)
AAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGA < SRR4302542.1988910/94‑1 (MQ=60)
AAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGA > SRR4302542.7371009/1‑94 (MQ=60)
AAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGA > SRR4302542.5220188/1‑94 (MQ=60)
AGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAT > SRR4302542.3301687/1‑94 (MQ=60)
AGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAT < SRR4302542.565590/94‑1 (MQ=60)
AGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAT > SRR4302542.1666203/1‑94 (MQ=60)
AGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGAT < SRR4302542.4869587/94‑1 (MQ=60)
GGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATC > SRR4302542.7295682/1‑94 (MQ=60)
GGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCG > SRR4302542.2246572/1‑94 (MQ=60)
GTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGA > SRR4302542.4541978/1‑94 (MQ=60)
GTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGA > SRR4302542.560462/1‑94 (MQ=60)
TATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAA > SRR4302542.127904/1‑94 (MQ=60)
TATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAA > SRR4302542.6929379/1‑94 (MQ=60)
ATTTGTTAACGGCGCGGCACAGGTTTACCTGATCGATAATAAAACCGCCGACCAGTACAAAATCCCCAACATCGCACAACTGAAAGATCCGAAG < SRR4302542.4220151/94‑1 (MQ=60)
ATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAG < SRR4302542.6036749/94‑1 (MQ=60)
ATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAG < SRR4302542.1471063/94‑1 (MQ=60)
TTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGA < SRR4302542.4616395/94‑1 (MQ=60)
TTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAACAT < SRR4302542.4466522/94‑1 (MQ=60)
TTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGAT > SRR4302542.2847933/1‑94 (MQ=60)
TGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATC < SRR4302542.288526/94‑1 (MQ=60)
GTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCG < SRR4302542.2055120/94‑1 (MQ=60)
GTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCG < SRR4302542.3609542/94‑1 (MQ=60)
GTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCG < SRR4302542.24477/94‑1 (MQ=60)
GTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCG < SRR4302542.7145765/94‑1 (MQ=60)
TTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGC > SRR4302542.4804818/1‑94 (MQ=60)
AACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCA < SRR4302542.1258234/94‑1 (MQ=60)
ACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAA > SRR4302542.588955/1‑94 (MQ=60)
GCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACT < SRR4302542.6095122/94‑1 (MQ=60)
GCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACT < SRR4302542.6468668/94‑1 (MQ=60)
CGGCCCAGGGTTCCCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCCCCAACACCGCCCAACTGAAAGATCCGAAGATCGCCAAACTGTT < SRR4302542.1156972/94‑1 (MQ=60)
CGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTT < SRR4302542.5558426/94‑1 (MQ=60)
GGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCGGGACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTC > SRR4302542.3351676/1‑94 (MQ=60)
GGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTC < SRR4302542.3542868/94‑1 (MQ=60)
GGCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTC < SRR4302542.4992927/94‑1 (MQ=60)
GCACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCG < SRR4302542.907199/94‑1 (MQ=60)
CACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGA > SRR4302542.4862211/1‑94 (MQ=60)
ACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAT > SRR4302542.4335921/1‑94 (MQ=60)
ACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAT > SRR4302542.4003453/1‑94 (MQ=60)
ACAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGAT > SRR4302542.2809442/1‑94 (MQ=60)
CAGGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATA > SRR4302542.7199098/1‑94 (MQ=60)
GGGTTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACC < SRR4302542.3736200/94‑1 (MQ=60)
TTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAC > SRR4302542.3639655/1‑94 (MQ=60)
TTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAC < SRR4302542.3264277/94‑1 (MQ=60)
TTACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAAC < SRR4302542.7352151/94‑1 (MQ=60)
TACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACG < SRR4302542.3646501/94‑1 (MQ=60)
TACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACG < SRR4302542.3811372/94‑1 (MQ=60)
TACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACG < SRR4302542.4218185/94‑1 (MQ=60)
TACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACG < SRR4302542.5267403/94‑1 (MQ=60)
ACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGG < SRR4302542.7483870/94‑1 (MQ=60)
ACCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGG < SRR4302542.133753/94‑1 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.4699567/1‑94 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.2053104/1‑94 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.6937240/1‑94 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.7161468/1‑94 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.3906907/1‑94 (MQ=60)
CCTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGC > SRR4302542.3882990/1‑94 (MQ=60)
CTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCG > SRR4302542.1958019/1‑94 (MQ=60)
CTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCG > SRR4302542.113495/1‑94 (MQ=60)
CTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCG > SRR4302542.3001565/1‑94 (MQ=60)
CTGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCG < SRR4302542.4178995/94‑1 (MQ=60)
TGATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGA > SRR4302542.309632/1‑94 (MQ=60)
GATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGAC > SRR4302542.117607/1‑94 (MQ=60)
GATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGAC < SRR4302542.6087919/94‑1 (MQ=60)
ATCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACG < SRR4302542.2365794/94‑1 (MQ=60)
TCGATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGG < SRR4302542.4066109/94‑1 (MQ=60)
CGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGA > SRR4302542.4367894/1‑94 (MQ=60)
GATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAA < SRR4302542.5798465/94‑1 (MQ=60)
GATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAA > SRR4302542.4782670/1‑94 (MQ=60)
ATAAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAA > SRR4302542.6593863/1‑94 (MQ=60)
AAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAG > SRR4302542.5378826/1‑94 (MQ=60)
AAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAG < SRR4302542.1737969/94‑1 (MQ=60)
AAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAG < SRR4302542.2719602/94‑1 (MQ=60)
AAGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAG < SRR4302542.6581900/94‑1 (MQ=60)
AGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGC < SRR4302542.4262396/94‑1 (MQ=60)
AGAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGC > SRR4302542.6839566/1‑94 (MQ=60)
AGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGC > SRR4302542.2720443/1‑94 (MQ=60)
GAAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCG < SRR4302542.397911/94‑1 (MQ=60)
AAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGG < SRR4302542.3975841/94‑1 (MQ=60)
AAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGG < SRR4302542.1836195/94‑1 (MQ=60)
AAAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGG < SRR4302542.2131084/94‑1 (MQ=60)
AAACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGA < SRR4302542.3807248/94‑1 (MQ=60)
AAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGA < SRR4302542.5563370/94‑1 (MQ=60)
AACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAT < SRR4302542.4321700/94‑1 (MQ=60)
AACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAT < SRR4302542.3656494/94‑1 (MQ=60)
AACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGAT > SRR4302542.2273708/1‑94 (MQ=60)
ACCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATT < SRR4302542.5153319/94‑1 (MQ=60)
CCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTT < SRR4302542.878694/94‑1 (MQ=60)
CCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTT < SRR4302542.6375216/94‑1 (MQ=60)
CCGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTT > SRR4302542.2429635/1‑94 (MQ=60)
CGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTA > SRR4302542.3697087/1‑94 (MQ=60)
CGCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTA > SRR4302542.5087385/1‑94 (MQ=60)
GCCGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAA < SRR4302542.3935885/94‑1 (MQ=60)
CGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC < SRR4302542.748214/94‑1 (MQ=60)
CGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC < SRR4302542.5524455/94‑1 (MQ=60)
CGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC < SRR4302542.2356681/94‑1 (MQ=60)
CGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC < SRR4302542.2552302/94‑1 (MQ=60)
CGGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACC < SRR4302542.3084998/94‑1 (MQ=60)
CGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTCAACC < SRR4302542.7043459/94‑1 (MQ=60)
GGCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCG < SRR4302542.1387498/94‑1 (MQ=60)
GCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGG > SRR4302542.6688474/1‑94 (MQ=60)
GCCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGG > SRR4302542.4723988/1‑94 (MQ=60)
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ACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGG > NC_000913/2805433‑2805619
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
