Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,871,779 |
A→G |
D79D (GAT→GAC) |
cysC ← |
adenosine 5'‑phosphosulfate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,871,779 | 0 | A | G | 86.9%
| 720.5
/ 95.5
| 297 | D79D (GAT→GAC) | cysC | adenosine 5'‑phosphosulfate kinase |
| Reads supporting (aligned to +/- strand): ref base A (23/16); new base G (136/122); total (159/138) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.64e-01 |
Only 100 of 298 total aligned reads displayed.
GGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTC > NC_000913/2871687‑2871868
|
ggCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCa < 1:6628219/93‑1 (MQ=255)
aaaTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTaaa < 2:2740494/93‑1 (MQ=255)
aaTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTaaaa < 1:108080/93‑1 (MQ=255)
aaTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTaaaa < 2:3348208/93‑1 (MQ=255)
aTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAc < 1:34954/93‑1 (MQ=255)
aTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAc > 1:4539071/1‑93 (MQ=255)
aTGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAc < 2:5909860/93‑1 (MQ=255)
tGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAcc < 2:2933261/93‑1 (MQ=255)
cGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCga < 2:1599701/93‑1 (MQ=255)
gTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCgaga > 1:4790430/1‑93 (MQ=255)
tCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAt < 1:6452688/93‑1 (MQ=255)
tCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAt < 2:482877/93‑1 (MQ=255)
gCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGc < 1:6293463/93‑1 (MQ=255)
gCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGc < 2:6084734/93‑1 (MQ=255)
gCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGc > 2:6532737/1‑93 (MQ=255)
ccaccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGc > 1:3439869/1‑93 (MQ=255)
ccaccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGc > 2:123899/1‑93 (MQ=255)
caccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCa < 2:3098264/93‑1 (MQ=255)
ccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATa > 2:365469/1‑93 (MQ=255)
ccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATa < 1:4300247/93‑1 (MQ=255)
ccaGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATa > 1:3635671/1‑93 (MQ=255)
caGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATaa < 1:4661953/93‑1 (MQ=255)
gTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATc < 1:3943155/93‑1 (MQ=255)
gTCCGACTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATc > 1:4700637/1‑93 (MQ=255)
tCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATcc < 1:5916765/93‑1 (MQ=255)
tCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATcc < 1:1801697/93‑1 (MQ=255)
cGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGt < 1:1567701/93‑1 (MQ=255)
ggCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTg < 1:3723574/93‑1 (MQ=255)
ggCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTg < 1:1200349/93‑1 (MQ=255)
ggCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTg > 2:602364/1‑93 (MQ=255)
gCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTgg > 1:6506555/1‑93 (MQ=255)
cTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGc < 1:3027746/93‑1 (MQ=255)
ttCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCg > 2:7119130/1‑93 (MQ=255)
ttCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCg > 2:3580821/1‑93 (MQ=255)
tCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGa < 2:5756661/93‑1 (MQ=255)
cAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGaa > 2:3894617/1‑93 (MQ=255)
cAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGaa < 1:956578/93‑1 (MQ=255)
aaCCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAAc > 2:1160639/1‑93 (MQ=255)
aCCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACa < 1:1446100/93‑1 (MQ=255)
aCCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACa > 2:6191985/1‑93 (MQ=255)
cATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACAtt < 1:3343433/93‑1 (MQ=255)
cATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACAtt > 1:7489626/1‑93 (MQ=255)
tCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGt > 1:6770603/1‑93 (MQ=255)
tCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGt > 1:208194/1‑93 (MQ=255)
tCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGt < 2:5227705/93‑1 (MQ=255)
cAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTc < 1:1679518/93‑1 (MQ=255)
cAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTc < 2:2191436/93‑1 (MQ=255)
ccACTTCACCGACGCGACGGATATTCTGTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCca > 2:6415721/1‑93 (MQ=255)
ccACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCca > 2:3498248/1‑93 (MQ=255)
ccACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCca < 1:1958711/93‑1 (MQ=255)
ccACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCca > 1:1476840/1‑93 (MQ=255)
cACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCcag > 2:1401250/1‑93 (MQ=255)
cACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCCGCATAATCCGTGGCGAACATTGTCGCCATCcag > 2:6931920/1‑93 (MQ=255)
ttCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCcagcag > 1:5048239/1‑93 (MQ=255)
ttCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCcagcag > 2:673068/1‑93 (MQ=255)
tCACCGACGCGACGGATATTCTCTTTATGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGa < 2:5837942/93‑1 (MQ=255)
tCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGa < 1:4102298/93‑1 (MQ=255)
aCCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATa > 1:1018405/1‑93 (MQ=255)
aCCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATa < 1:2784526/93‑1 (MQ=255)
aCCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATa < 1:1495960/93‑1 (MQ=255)
aCCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATa < 2:262062/93‑1 (MQ=255)
ccGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATAc > 1:4565904/1‑93 (MQ=255)
cgacgcgacgGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACg < 2:1140049/93‑1 (MQ=255)
acgcgacgGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTa < 1:5795497/93‑1 (MQ=255)
cgcgacgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTAc < 2:3764078/93‑1 (MQ=255)
gcgacgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACt > 1:5310974/1‑93 (MQ=255)
cgacgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTg < 1:6195524/93‑1 (MQ=255)
gacgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGa < 2:105495/93‑1 (MQ=255)
gacgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGa < 2:4954682/93‑1 (MQ=255)
acgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAc < 1:717237/93‑1 (MQ=255)
acgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAc > 1:275964/1‑93 (MQ=255)
acgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAc > 2:1885419/1‑93 (MQ=255)
acgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAc > 2:1491580/1‑93 (MQ=255)
acgGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAc > 1:3184415/1‑93 (MQ=255)
gATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGcc > 2:363244/1‑93 (MQ=255)
gATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGcc < 1:5716836/93‑1 (MQ=255)
atatTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCg < 1:7025847/93‑1 (MQ=255)
atatTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCg > 2:1277401/1‑93 (MQ=255)
tatTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGa > 1:5473176/1‑93 (MQ=255)
tatTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGa > 2:7178786/1‑93 (MQ=255)
atTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAg > 1:5594932/1‑93 (MQ=255)
atTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAg < 1:2628389/93‑1 (MQ=255)
tctTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTa > 2:2493949/1‑93 (MQ=255)
ctTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTAt > 2:751533/1‑93 (MQ=255)
ctTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTAt < 2:5103745/93‑1 (MQ=255)
ctTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTAt > 2:4543070/1‑93 (MQ=255)
tttACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATg < 1:85177/93‑1 (MQ=255)
ttACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGt > 1:2259760/1‑93 (MQ=255)
ttACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGt > 2:6972630/1‑93 (MQ=255)
ttACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGt < 2:3217808/93‑1 (MQ=255)
tACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTa < 2:5642451/93‑1 (MQ=255)
cGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAAc < 2:4430543/93‑1 (MQ=255)
gATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACg > 2:5021228/1‑93 (MQ=255)
aTCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGc > 2:2573429/1‑93 (MQ=255)
aTCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGc > 2:7347948/1‑93 (MQ=255)
aTCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGc > 2:5419280/1‑93 (MQ=255)
tCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGcc > 2:4616651/1‑93 (MQ=255)
tCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGcc < 2:5783641/93‑1 (MQ=255)
tCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGcc > 2:234235/1‑93 (MQ=255)
cGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGcct < 1:738945/93‑1 (MQ=255)
|
GGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTC > NC_000913/2871687‑2871868
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTCC > NC_000913/2871686‑2871872
|
TGGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCG < SRR4302542.3315059/94‑1 (MQ=60)
TGGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCG < SRR4302542.4155125/94‑1 (MQ=60)
TGGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCG < SRR4302542.6997302/94‑1 (MQ=60)
GGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCAT < SRR4302542.6693569/94‑1 (MQ=60)
GCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTC > SRR4302542.4709068/1‑94 (MQ=60)
GCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTC < SRR4302542.4912388/94‑1 (MQ=60)
CGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCG > SRR4302542.3637172/1‑94 (MQ=60)
CGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCG < SRR4302542.6426729/94‑1 (MQ=60)
CGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCG < SRR4302542.963650/94‑1 (MQ=60)
GAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGC > SRR4302542.518576/1‑94 (MQ=60)
GATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTA > SRR4302542.3481448/1‑94 (MQ=60)
AAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAA > SRR4302542.5826223/1‑94 (MQ=60)
AATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAC < SRR4302542.108964/94‑1 (MQ=60)
AATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAAC > SRR4302542.4583514/1‑94 (MQ=60)
ATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACC < SRR4302542.35265/94‑1 (MQ=60)
ATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACC > SRR4302542.6672581/1‑94 (MQ=60)
TGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCG < SRR4302542.5090713/94‑1 (MQ=60)
TGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCG > SRR4302542.7477082/1‑94 (MQ=60)
CGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAG > SRR4302542.5935544/1‑94 (MQ=60)
CGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAG < SRR4302542.3223182/94‑1 (MQ=60)
CGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAG < SRR4302542.6565129/94‑1 (MQ=60)
GGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGA > SRR4302542.4837109/1‑94 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAT > SRR4302542.7094234/1‑94 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAT > SRR4302542.4300376/1‑94 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAT < SRR4302542.3702311/94‑1 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGAT > SRR4302542.2127286/1‑94 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGAT < SRR4302542.3848514/94‑1 (MQ=60)
GTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGAT < SRR4302542.624826/94‑1 (MQ=60)
TCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATC < SRR4302542.1486616/94‑1 (MQ=60)
TCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATC < SRR4302542.2075329/94‑1 (MQ=60)
TCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATC < SRR4302542.6516226/94‑1 (MQ=60)
TCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATC < SRR4302542.3425983/94‑1 (MQ=60)
GCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATC < SRR4302542.4832118/94‑1 (MQ=60)
CAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCG < SRR4302542.969043/94‑1 (MQ=60)
CAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCG > SRR4302542.1763362/1‑94 (MQ=60)
GCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCT < SRR4302542.6355470/94‑1 (MQ=60)
CACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTG < SRR4302542.2492668/94‑1 (MQ=60)
ACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGC > SRR4302542.3472073/1‑94 (MQ=60)
CCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCA > SRR4302542.2810933/1‑94 (MQ=60)
CCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCA > SRR4302542.1477631/1‑94 (MQ=60)
CACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCAT > SRR4302542.7590337/1‑94 (MQ=60)
CACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCAT > SRR4302542.1626160/1‑94 (MQ=60)
CACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCAT > SRR4302542.352374/1‑94 (MQ=60)
ACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATA > SRR4302542.3669578/1‑94 (MQ=60)
CCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAA < SRR4302542.4342534/94‑1 (MQ=60)
CAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAAT < SRR4302542.4707528/94‑1 (MQ=60)
CAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAAT > SRR4302542.6570704/1‑94 (MQ=60)
AGTCCGACTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATC > SRR4302542.4746519/1‑94 (MQ=60)
GTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCC < SRR4302542.3982104/94‑1 (MQ=60)
GTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCC > SRR4302542.6569541/1‑94 (MQ=60)
TCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCG < SRR4302542.5974101/94‑1 (MQ=60)
TCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCG < SRR4302542.1817317/94‑1 (MQ=60)
CGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTG < SRR4302542.4226416/94‑1 (MQ=60)
CGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTG < SRR4302542.1581236/94‑1 (MQ=60)
CGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTG < SRR4302542.6947995/94‑1 (MQ=60)
GGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGG < SRR4302542.3760449/94‑1 (MQ=60)
GGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGG < SRR4302542.1210682/94‑1 (MQ=60)
GGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGG > SRR4302542.6570694/1‑94 (MQ=60)
GGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGG < SRR4302542.1307085/94‑1 (MQ=60)
GGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGG > SRR4302542.1777673/1‑94 (MQ=60)
CTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCG > SRR4302542.747192/1‑94 (MQ=60)
CTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCG < SRR4302542.3056645/94‑1 (MQ=60)
TTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATAGTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGA > SRR4302542.6273011/1‑94 (MQ=60)
TTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATAGTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGA > SRR4302542.6273012/1‑94 (MQ=60)
TCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAA > SRR4302542.4109903/1‑94 (MQ=60)
TCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAA > SRR4302542.2882282/1‑94 (MQ=60)
CAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAAC < SRR4302542.964786/94‑1 (MQ=60)
ACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACAT < SRR4302542.5583520/94‑1 (MQ=60)
ACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACAT < SRR4302542.1458577/94‑1 (MQ=60)
CCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATT < SRR4302542.4728825/94‑1 (MQ=60)
CCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATT > SRR4302542.6814109/1‑94 (MQ=60)
CCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATT > SRR4302542.7563106/1‑94 (MQ=60)
CATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTG < SRR4302542.3374902/94‑1 (MQ=60)
CATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTG < SRR4302542.6819900/94‑1 (MQ=60)
ATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGT > SRR4302542.4648147/1‑94 (MQ=60)
ATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGT > SRR4302542.209988/1‑94 (MQ=60)
ATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGT > SRR4302542.6837182/1‑94 (MQ=60)
TCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTC > SRR4302542.219548/1‑94 (MQ=60)
CAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCG < SRR4302542.1694042/94‑1 (MQ=60)
CAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCG > SRR4302542.5684330/1‑94 (MQ=60)
CAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCG > SRR4302542.15741/1‑94 (MQ=60)
ATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCA > SRR4302542.1172776/1‑94 (MQ=60)
TTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCAT < SRR4302542.911305/94‑1 (MQ=60)
GCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCA > SRR4302542.4881625/1‑94 (MQ=60)
GCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCA < SRR4302542.3673531/94‑1 (MQ=60)
GCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCA > SRR4302542.4353217/1‑94 (MQ=60)
GCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCA > SRR4302542.1489579/1‑94 (MQ=60)
GCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCA < SRR4302542.7365870/94‑1 (MQ=60)
CCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAG < SRR4302542.1975654/94‑1 (MQ=60)
CCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAG < SRR4302542.7575838/94‑1 (MQ=60)
ACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCA < SRR4302542.5794665/94‑1 (MQ=60)
ACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCA > SRR4302542.1947658/1‑94 (MQ=60)
CTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAG > SRR4302542.4602157/1‑94 (MQ=60)
CTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAG < SRR4302542.5507126/94‑1 (MQ=60)
CTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAG > SRR4302542.7425849/1‑94 (MQ=60)
CTTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAG > SRR4302542.5097247/1‑94 (MQ=60)
TTCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGA > SRR4302542.195013/1‑94 (MQ=60)
TCACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGAT < SRR4302542.4142742/94‑1 (MQ=60)
CACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATA > SRR4302542.1027179/1‑94 (MQ=60)
CACCGACGCGACGGATATTCACTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATA > SRR4302542.6482388/1‑94 (MQ=60)
ACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATAC < SRR4302542.2811333/94‑1 (MQ=60)
ACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATAC < SRR4302542.1508898/94‑1 (MQ=60)
ACCGACGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATAC > SRR4302542.4610603/1‑94 (MQ=60)
ACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTAC < SRR4302542.5851752/94‑1 (MQ=60)
CGCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACT > SRR4302542.5362571/1‑94 (MQ=60)
GCGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTG < SRR4302542.202192/94‑1 (MQ=60)
CGACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGA < SRR4302542.6255914/94‑1 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC > SRR4302542.1256899/1‑94 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC < SRR4302542.1506102/94‑1 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC < SRR4302542.3939280/94‑1 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC > SRR4302542.3214583/1‑94 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC > SRR4302542.278320/1‑94 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC < SRR4302542.166844/94‑1 (MQ=60)
GACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGAC < SRR4302542.1556902/94‑1 (MQ=60)
ACGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACG < SRR4302542.723423/94‑1 (MQ=60)
CGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGC > SRR4302542.2626959/1‑94 (MQ=60)
CGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGC > SRR4302542.1057675/1‑94 (MQ=60)
CGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGC > SRR4302542.4608796/1‑94 (MQ=60)
CGGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGC > SRR4302542.5745929/1‑94 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACTTTGTCGCCATCCAGCAGATACGTTCTGACGCC < SRR4302542.6234913/94‑1 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCC > SRR4302542.7101632/1‑94 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCC > SRR4302542.4512987/1‑94 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCC > SRR4302542.5628447/1‑94 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCC > SRR4302542.4823183/1‑94 (MQ=60)
GGATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCC > SRR4302542.3402608/1‑94 (MQ=60)
GATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCG < SRR4302542.5772319/94‑1 (MQ=60)
GATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCG > SRR4302542.3314559/1‑94 (MQ=60)
ATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGA < SRR4302542.7094891/94‑1 (MQ=60)
ATATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGA > SRR4302542.5526348/1‑94 (MQ=60)
TATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAG < SRR4302542.2788/94‑1 (MQ=60)
TATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAG > SRR4302542.5649294/1‑94 (MQ=60)
ATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGT < SRR4302542.542389/94‑1 (MQ=60)
ATTCTCTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGT < SRR4302542.2653783/94‑1 (MQ=60)
TTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTT > SRR4302542.2664597/1‑94 (MQ=60)
CTTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATG < SRR4302542.2865641/94‑1 (MQ=60)
TTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGT < SRR4302542.110439/94‑1 (MQ=60)
TTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGT < SRR4302542.85888/94‑1 (MQ=60)
TTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGT < SRR4302542.5307611/94‑1 (MQ=60)
TTTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGT > SRR4302542.2279189/1‑94 (MQ=60)
TTACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTA < SRR4302542.315973/94‑1 (MQ=60)
ACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAAC < SRR4302542.3182344/94‑1 (MQ=60)
ACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAAC < SRR4302542.3549273/94‑1 (MQ=60)
ACGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAAC < SRR4302542.2740526/94‑1 (MQ=60)
CGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACG < SRR4302542.716554/94‑1 (MQ=60)
CGATCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACG > SRR4302542.5950472/1‑94 (MQ=60)
ATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCC > SRR4302542.4067786/1‑94 (MQ=60)
ATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCC > SRR4302542.1508116/1‑94 (MQ=60)
TCGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCT < SRR4302542.4642878/94‑1 (MQ=60)
CGGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTC < SRR4302542.745357/94‑1 (MQ=60)
GGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGGCGCCGAGTTTATGTAACGCCTCC > SRR4302542.3371728/1‑94 (MQ=60)
GGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGGCGCCGAGTTTATGTAACGCCTCC > SRR4302542.3371724/1‑94 (MQ=60)
GGCGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCC > SRR4302542.2828209/1‑94 (MQ=60)
CGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTC > SRR4302542.3788596/1‑94 (MQ=60)
CGTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTC > SRR4302542.3333861/1‑94 (MQ=60)
GTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTCC < SRR4302542.88513/94‑1 (MQ=60)
GTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTCC > SRR4302542.1718533/1‑94 (MQ=60)
GTCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTCC > SRR4302542.6085360/1‑94 (MQ=60)
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TGGCGAGATAAATGCGGTCAGCACCACCAGTCCGGCTTCAACCATCAAATTCGCCACTTCACCGACGCGACGGATATTCTCTTTACGATCGGCATCGCTAAAACCGAGATCGCTGCATAATCCGTGGCGAACATTGTCGCCATCCAGCAGATACGTACTGACGCCGAGTTTATGTAACGCCTCCTCC > NC_000913/2871686‑2871872
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
