Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,872,811 |
T→C |
D211G (GAC→GGC) |
cysN ← |
ATP‑sulfurylase subunit 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,872,811 | 0 | T | C | 84.1%
| 697.8
/ 128.6
| 314 | D211G (GAC→GGC) | cysN | ATP‑sulfurylase subunit 1 |
| Reads supporting (aligned to +/- strand): ref base T (25/25); new base C (128/136); total (153/161) |
| Fisher's exact test for biased strand distribution p-value = 8.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.52e-02 |
Only 100 of 317 total aligned reads displayed.
ACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG > NC_000913/2872721‑2872903
|
accacTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCg > 2:1429432/1‑93 (MQ=255)
cacTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTgccgcc > 2:6123064/1‑93 (MQ=255)
acTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCt < 2:2850789/93‑1 (MQ=255)
cTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCtt > 1:6909194/1‑93 (MQ=255)
cTCGCTGCATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCtt < 1:4451891/93‑1 (MQ=255)
tCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTc < 1:1741994/93‑1 (MQ=255)
gCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCa > 2:6701395/1‑93 (MQ=255)
cTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAg > 2:372680/1‑93 (MQ=255)
cTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAg < 1:7349315/93‑1 (MQ=255)
gATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAgcgc < 2:353967/93‑1 (MQ=255)
gATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAgcgc > 1:5471490/1‑93 (MQ=255)
aTCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCa < 1:2841364/93‑1 (MQ=255)
tctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCag > 1:5813794/1‑93 (MQ=255)
tctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCag < 2:5641818/93‑1 (MQ=255)
ctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCaga > 2:5906698/1‑93 (MQ=255)
ctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCaga < 1:1072538/93‑1 (MQ=255)
tcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCagag > 2:686804/1‑93 (MQ=255)
ccACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCagaga > 1:4688684/1‑93 (MQ=255)
ccACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCagaga < 1:1671340/93‑1 (MQ=255)
ccACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCagaga > 1:780857/1‑93 (MQ=255)
aCGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGc > 1:6551641/1‑93 (MQ=255)
aCGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGc < 2:2749159/93‑1 (MQ=255)
ggTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCgg < 2:2500120/93‑1 (MQ=255)
tttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGca < 1:4377551/93‑1 (MQ=255)
tttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGca < 1:1948273/93‑1 (MQ=255)
ttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGcac < 1:2693482/93‑1 (MQ=255)
tCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGcaca > 1:6799480/1‑93 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAg < 1:2266064/93‑1 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAg > 1:1558706/1‑93 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAg > 2:5990279/1‑93 (MQ=255)
gCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGc > 2:4025531/1‑93 (MQ=255)
gCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGc < 2:4237458/93‑1 (MQ=255)
cACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCg > 1:7474987/1‑93 (MQ=255)
cTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGa < 2:4076887/93‑1 (MQ=255)
cTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTGCCAGCGCAGAGAGCGGCACAAAGCGGa < 2:6425546/93‑1 (MQ=255)
ttCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGat < 2:3343811/93‑1 (MQ=255)
ttCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGat > 1:2959950/1‑93 (MQ=255)
tCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGata > 2:618535/1‑93 (MQ=255)
aGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATcc > 2:5843234/1‑93 (MQ=255)
gtgtCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGAt > 2:5386443/1‑93 (MQ=255)
gtgtCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAt > 1:1325891/1‑93 (MQ=255)
gtCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTa < 2:2017043/93‑1 (MQ=255)
tCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAc > 1:5691477/1‑93 (MQ=255)
tCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAc < 2:4627900/93‑1 (MQ=255)
cGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAcc < 1:6346313/93‑1 (MQ=255)
cGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAcc > 1:929016/1‑93 (MQ=255)
aCCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCgg < 2:2226426/93‑1 (MQ=255)
aCCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCgg < 1:5580304/93‑1 (MQ=255)
ccGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGc < 1:5120496/93‑1 (MQ=255)
ccGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGc > 2:7016710/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa > 2:2953424/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa > 2:208819/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 1:4164182/93‑1 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 1:2372086/93‑1 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 2:105984/93‑1 (MQ=255)
cTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGc < 1:3327972/93‑1 (MQ=255)
cTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGc > 1:2129611/1‑93 (MQ=255)
gTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTg > 1:6029530/1‑93 (MQ=255)
tACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGc < 2:6559763/93‑1 (MQ=255)
ccACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGccc < 1:953161/93‑1 (MQ=255)
ccACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGccc < 1:2537795/93‑1 (MQ=255)
ccACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGccc > 1:18859/1‑93 (MQ=255)
aCGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCgg > 1:1610398/1‑93 (MQ=255)
ggCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCa < 1:3482444/93‑1 (MQ=255)
cATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCaaa < 1:7018954/93‑1 (MQ=255)
cATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCaaa < 2:662225/93‑1 (MQ=255)
aTACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAg < 2:785300/93‑1 (MQ=255)
aTACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAg < 2:3047689/93‑1 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:162365/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:2431506/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg < 2:1914839/93‑1 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 1:6882522/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg < 1:3598492/93‑1 (MQ=255)
cTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTc > 1:399633/1‑93 (MQ=255)
aCTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaata < 2:6265468/93‑1 (MQ=255)
aCTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaata > 1:7183283/1‑93 (MQ=255)
cTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataa < 1:5952171/93‑1 (MQ=255)
tttGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataat > 2:4482043/1‑93 (MQ=255)
tttGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataat < 1:5216561/93‑1 (MQ=255)
ttGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATc < 1:3133610/93‑1 (MQ=255)
tGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCt < 1:6142849/93‑1 (MQ=255)
tGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCt < 2:2208696/93‑1 (MQ=255)
tGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCt < 2:4816523/93‑1 (MQ=255)
gCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCtt < 1:5017566/93‑1 (MQ=255)
cGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTc > 1:1261075/1‑93 (MQ=255)
cGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTc < 1:7078846/93‑1 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa < 2:2670407/93‑1 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa < 2:1352699/93‑1 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa < 1:4730627/93‑1 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa > 1:1707077/1‑93 (MQ=255)
aTGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAc > 2:5070176/1‑93 (MQ=255)
tGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACg > 2:5182026/1‑93 (MQ=255)
gCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGa > 2:832587/1‑93 (MQ=255)
ccACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGaa > 2:2576316/1‑93 (MQ=255)
cACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAt < 2:3587605/93‑1 (MQ=255)
aCGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATa > 1:2177694/1‑93 (MQ=255)
gTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACg < 2:5714077/93‑1 (MQ=255)
ttGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACgg > 1:4632032/1‑93 (MQ=255)
ttGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACgg > 1:2601412/1‑93 (MQ=255)
tCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTg < 2:7081834/93‑1 (MQ=255)
|
ACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG > NC_000913/2872721‑2872903
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG > NC_000913/2872718‑2872903
|
TCCACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGC > SRR4302542.803152/1‑94 (MQ=60)
CCACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCC > SRR4302542.6012093/1‑94 (MQ=60)
CACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCG > SRR4302542.1651657/1‑94 (MQ=60)
CACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCG < SRR4302542.4268619/94‑1 (MQ=60)
CACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCG < SRR4302542.7452383/94‑1 (MQ=60)
ACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGC > SRR4302542.7163157/1‑94 (MQ=60)
CCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCC > SRR4302542.3117051/1‑94 (MQ=60)
ACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTT > SRR4302542.6977023/1‑94 (MQ=60)
ACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTT > SRR4302542.6770171/1‑94 (MQ=60)
CTCGCTGCATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTC < SRR4302542.4495558/94‑1 (MQ=60)
TCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCC < SRR4302542.1757110/94‑1 (MQ=60)
TCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCC < SRR4302542.6777020/94‑1 (MQ=60)
CGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCA < SRR4302542.7348758/94‑1 (MQ=60)
CGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCA < SRR4302542.5856445/94‑1 (MQ=60)
CGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCA > SRR4302542.5965470/1‑94 (MQ=60)
CGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCA > SRR4302542.6225003/1‑94 (MQ=60)
GCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAG < SRR4302542.7063845/94‑1 (MQ=60)
CTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGC < SRR4302542.7421290/94‑1 (MQ=60)
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCG < SRR4302542.1531747/94‑1 (MQ=60)
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCG < SRR4302542.4494506/94‑1 (MQ=60)
GGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGC > SRR4302542.5524649/1‑94 (MQ=60)
GGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGC > SRR4302542.7327155/1‑94 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG < SRR4302542.2868662/94‑1 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG > SRR4302542.4220207/1‑94 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG > SRR4302542.5870210/1‑94 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG > SRR4302542.5368330/1‑94 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.3762512/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.1081755/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.1304201/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACCTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAG < SRR4302542.6271355/94‑1 (MQ=60)
TCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGA > SRR4302542.4734475/1‑94 (MQ=60)
TCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGA > SRR4302542.787604/1‑94 (MQ=60)
CCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAG < SRR4302542.1685788/94‑1 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGC > SRR4302542.4773735/1‑94 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGC > SRR4302542.6616230/1‑94 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGC > SRR4302542.1751645/1‑94 (MQ=60)
ACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCG < SRR4302542.2204707/94‑1 (MQ=60)
CGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGG > SRR4302542.6926079/1‑94 (MQ=60)
CGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGG < SRR4302542.4511774/94‑1 (MQ=60)
TTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCAC < SRR4302542.4420513/94‑1 (MQ=60)
TTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCAC < SRR4302542.1965120/94‑1 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA > SRR4302542.6866340/1‑94 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA > SRR4302542.928063/1‑94 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA < SRR4302542.2719456/94‑1 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG > SRR4302542.1572164/1‑94 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG < SRR4302542.1615632/94‑1 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG < SRR4302542.1007150/94‑1 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC < SRR4302542.2285564/94‑1 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC > SRR4302542.4294382/1‑94 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC > SRR4302542.5630120/1‑94 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCG > SRR4302542.7548237/1‑94 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG > SRR4302542.1843813/1‑94 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG < SRR4302542.570328/94‑1 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG < SRR4302542.7156654/94‑1 (MQ=60)
CACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGG > SRR4302542.1712282/1‑94 (MQ=60)
CACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGG > SRR4302542.7084479/1‑94 (MQ=60)
ACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGA < SRR4302542.4066694/94‑1 (MQ=60)
CTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGAT < SRR4302542.2599677/94‑1 (MQ=60)
CTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGAT > SRR4302542.2988318/1‑94 (MQ=60)
TCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATAT < SRR4302542.5606340/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.6485056/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC > SRR4302542.6971082/1‑94 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.2248895/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.1927540/94‑1 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA > SRR4302542.6974664/1‑94 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA < SRR4302542.5074965/94‑1 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA > SRR4302542.3368652/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.2904638/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.1652209/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.4107364/1‑94 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT < SRR4302542.6124578/94‑1 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT > SRR4302542.2342238/1‑94 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT > SRR4302542.1337311/1‑94 (MQ=60)
TGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTA < SRR4302542.2958026/94‑1 (MQ=60)
TGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTA > SRR4302542.7297904/1‑94 (MQ=60)
GTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAC > SRR4302542.5746747/1‑94 (MQ=60)
TCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACC < SRR4302542.2595555/94‑1 (MQ=60)
TCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACC > SRR4302542.937005/1‑94 (MQ=60)
CGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCC < SRR4302542.6408841/94‑1 (MQ=60)
GGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCG < SRR4302542.2180256/94‑1 (MQ=60)
ACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGC < SRR4302542.3404457/94‑1 (MQ=60)
ACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGC < SRR4302542.5634527/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.575431/1‑94 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.2284362/1‑94 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA < SRR4302542.5170220/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA < SRR4302542.2452290/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.2645199/1‑94 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.2779096/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4169229/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4986127/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.2392998/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4205243/94‑1 (MQ=60)
GCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGC > SRR4302542.2147988/1‑94 (MQ=60)
CTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCT < SRR4302542.3359299/94‑1 (MQ=60)
TGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTG > SRR4302542.958823/1‑94 (MQ=60)
TGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTG > SRR4302542.6087912/1‑94 (MQ=60)
GTATCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGC > SRR4302542.776135/1‑94 (MQ=60)
ACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCC > SRR4302542.19023/1‑94 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.2895142/94‑1 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.2562404/94‑1 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG > SRR4302542.958266/1‑94 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.961344/94‑1 (MQ=60)
CACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGG > SRR4302542.302046/1‑94 (MQ=60)
CACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGG > SRR4302542.1624305/1‑94 (MQ=60)
CGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCA > SRR4302542.5932753/1‑94 (MQ=60)
CGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCA > SRR4302542.3285989/1‑94 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA > SRR4302542.2182823/1‑94 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA < SRR4302542.3515026/94‑1 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA > SRR4302542.1814062/1‑94 (MQ=60)
CATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAG < SRR4302542.1735594/94‑1 (MQ=60)
CATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAG < SRR4302542.7087928/94‑1 (MQ=60)
ATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGG > SRR4302542.5177232/1‑94 (MQ=60)
ATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGG > SRR4302542.6950126/1‑94 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT < SRR4302542.858752/94‑1 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT > SRR4302542.4477663/1‑94 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT < SRR4302542.3632041/94‑1 (MQ=60)
ACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTC > SRR4302542.403087/1‑94 (MQ=60)
ACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTC > SRR4302542.1166169/1‑94 (MQ=60)
CTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCA < SRR4302542.1960764/94‑1 (MQ=60)
CTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCA > SRR4302542.1619227/1‑94 (MQ=60)
TTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAA > SRR4302542.2796842/1‑94 (MQ=60)
TCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAAT < SRR4302542.512503/94‑1 (MQ=60)
TCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAAT < SRR4302542.4684567/94‑1 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.2542727/1‑94 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.7253724/1‑94 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.1303433/1‑94 (MQ=60)
ACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAA < SRR4302542.2353066/94‑1 (MQ=60)
CTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAAT < SRR4302542.6009818/94‑1 (MQ=60)
CTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAAT > SRR4302542.1188654/1‑94 (MQ=60)
TTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATC > SRR4302542.7147144/1‑94 (MQ=60)
TTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATC < SRR4302542.5267285/94‑1 (MQ=60)
TTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCT < SRR4302542.4761646/94‑1 (MQ=60)
TTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCT < SRR4302542.3163404/94‑1 (MQ=60)
TGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTT < SRR4302542.6202284/94‑1 (MQ=60)
TGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTT < SRR4302542.6884998/94‑1 (MQ=60)
GCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTC > SRR4302542.1271919/1‑94 (MQ=60)
GCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTC < SRR4302542.5066296/94‑1 (MQ=60)
CGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA > SRR4302542.5276160/1‑94 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA > SRR4302542.1721874/1‑94 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.1702036/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.6778911/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.5827912/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.5672453/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.7148320/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.7502436/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC > SRR4302542.1694653/1‑94 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.4776760/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.6044678/94‑1 (MQ=60)
ATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACG > SRR4302542.1346761/1‑94 (MQ=60)
GCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAA < SRR4302542.2125388/94‑1 (MQ=60)
GCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAA > SRR4302542.4522109/1‑94 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT < SRR4302542.7116026/94‑1 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT < SRR4302542.77490/94‑1 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT > SRR4302542.7529132/1‑94 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT > SRR4302542.2068018/1‑94 (MQ=60)
CACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATA > SRR4302542.2196430/1‑94 (MQ=60)
ACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATAC < SRR4302542.3992688/94‑1 (MQ=60)
ACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATAC < SRR4302542.5259223/94‑1 (MQ=60)
CGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACG < SRR4302542.6560791/94‑1 (MQ=60)
GTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.6039981/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4900093/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4900092/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG < SRR4302542.3247778/94‑1 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4682248/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4677294/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.2626575/1‑94 (MQ=60)
TTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGG < SRR4302542.6161696/94‑1 (MQ=60)
TTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGG < SRR4302542.3574089/94‑1 (MQ=60)
TGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGT > SRR4302542.2658273/1‑94 (MQ=60)
TGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGT > SRR4302542.3549600/1‑94 (MQ=60)
GCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG < SRR4302542.3774722/94‑1 (MQ=60)
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TCCACCACTCGCTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG > NC_000913/2872718‑2872903
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
