Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,872,822 |
T→C |
A207A (GCA→GCG) |
cysN ← |
ATP‑sulfurylase subunit 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,872,822 | 0 | T | C | 83.0%
| 665.2
/ 132.2
| 306 | A207A (GCA→GCG) | cysN | ATP‑sulfurylase subunit 1 |
| Reads supporting (aligned to +/- strand): ref base T (26/26); new base C (120/134); total (146/160) |
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.99e-01 |
Only 100 of 310 total aligned reads displayed.
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTC > NC_000913/2872730‑2872911
|
gATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGc < 2:2005176/93‑1 (MQ=255)
gATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAgcgc < 2:353967/93‑1 (MQ=255)
aTCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCa < 1:2841364/93‑1 (MQ=255)
tctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCag > 2:2187061/1‑93 (MQ=255)
ctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCaga < 1:1072538/93‑1 (MQ=255)
ctcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCaga < 1:1293065/93‑1 (MQ=255)
tcCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCagag > 2:686804/1‑93 (MQ=255)
cACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCagagag < 2:5834504/93‑1 (MQ=255)
aCGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGc > 1:4727633/1‑93 (MQ=255)
aCGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGc < 1:2185879/93‑1 (MQ=255)
ggTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCgg < 2:2500120/93‑1 (MQ=255)
gTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGc > 2:2212238/1‑93 (MQ=255)
tttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGca < 1:4377551/93‑1 (MQ=255)
ttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGcac > 2:4189317/1‑93 (MQ=255)
ttCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGcac < 1:2693482/93‑1 (MQ=255)
tCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGcaca > 1:6799480/1‑93 (MQ=255)
cAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACaaa < 2:1021979/93‑1 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAg < 2:2075841/93‑1 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAg < 1:2266064/93‑1 (MQ=255)
aGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAg > 1:1558706/1‑93 (MQ=255)
aCTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCgg < 1:4026964/93‑1 (MQ=255)
aCTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCgg > 1:7015575/1‑93 (MQ=255)
cTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTGCCAGCGCAGAGAGCGGCACAAAGCGGa < 2:6425546/93‑1 (MQ=255)
tCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGata > 2:1867629/1‑93 (MQ=255)
tCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGata < 1:5552388/93‑1 (MQ=255)
tCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGata < 2:5601512/93‑1 (MQ=255)
cGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGatat > 2:1413758/1‑93 (MQ=255)
gAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATc > 2:522020/1‑93 (MQ=255)
gAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATc < 1:1911021/93‑1 (MQ=255)
aGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGa > 2:5431108/1‑93 (MQ=255)
aGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGa < 1:6065826/93‑1 (MQ=255)
tgtCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAtt < 1:2929961/93‑1 (MQ=255)
ggACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAccc < 1:2161638/93‑1 (MQ=255)
aCCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCgg < 1:3372773/93‑1 (MQ=255)
ccGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGc > 2:7016710/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa > 1:570528/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa > 2:2953424/1‑93 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 1:4938132/93‑1 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 1:4164182/93‑1 (MQ=255)
cGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCa < 1:2372086/93‑1 (MQ=255)
cTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCagcagc < 2:5903126/93‑1 (MQ=255)
cTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGc < 2:3417830/93‑1 (MQ=255)
cTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGc < 2:3321995/93‑1 (MQ=255)
tGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCt < 2:4068108/93‑1 (MQ=255)
gTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTg > 1:950656/1‑93 (MQ=255)
tACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGc < 2:6559763/93‑1 (MQ=255)
aCCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGcc > 2:6094769/1‑93 (MQ=255)
ccACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGccc < 1:2537795/93‑1 (MQ=255)
cACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCg > 2:4749651/1‑93 (MQ=255)
cACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCg < 2:4353513/93‑1 (MQ=255)
aCGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCgg > 1:299438/1‑93 (MQ=255)
aCGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCgg > 1:1610398/1‑93 (MQ=255)
cGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGc < 2:6179287/93‑1 (MQ=255)
ggCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCa > 1:5875794/1‑93 (MQ=255)
gCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCaa > 1:1798464/1‑93 (MQ=255)
cATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCaaa < 2:662225/93‑1 (MQ=255)
aTACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAg < 2:1117408/93‑1 (MQ=255)
aTACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAg < 2:3047689/93‑1 (MQ=255)
aTACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAg < 2:785300/93‑1 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:5094876/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:2592467/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:162365/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 2:2431506/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg < 1:851411/93‑1 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAgg > 1:6882522/1‑93 (MQ=255)
tACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAACTGCCCGGCAAAgg > 2:384927/1‑93 (MQ=255)
aCTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGt > 2:596864/1‑93 (MQ=255)
tCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCaaa < 1:4639236/93‑1 (MQ=255)
tCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCaaa < 1:508091/93‑1 (MQ=255)
aCTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaata > 1:7183283/1‑93 (MQ=255)
cTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataa > 2:2737963/1‑93 (MQ=255)
cTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataa > 2:6705419/1‑93 (MQ=255)
tttGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAaataat > 2:4482043/1‑93 (MQ=255)
ttGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATc > 1:7077685/1‑93 (MQ=255)
cGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTc < 1:5617882/93‑1 (MQ=255)
gATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa > 1:5225342/1‑93 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa < 2:5691837/93‑1 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa > 1:1707077/1‑93 (MQ=255)
gATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCa < 1:7429729/93‑1 (MQ=255)
aTGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAc > 1:1680118/1‑93 (MQ=255)
gCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGa > 2:832587/1‑93 (MQ=255)
ccACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGaa < 1:76853/93‑1 (MQ=255)
ccACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGaa > 1:4478145/1‑93 (MQ=255)
cGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATAc < 1:6496770/93‑1 (MQ=255)
gTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACg < 2:5714077/93‑1 (MQ=255)
gTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACg > 2:3652225/1‑93 (MQ=255)
gTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACg < 2:2763756/93‑1 (MQ=255)
ttGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACgg > 1:5982036/1‑93 (MQ=255)
ttGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACgg > 1:2601412/1‑93 (MQ=255)
ttGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACgg < 1:3541005/93‑1 (MQ=255)
tgccGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACggg < 2:4889389/90‑1 (MQ=255)
gccGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGt < 2:4624265/91‑1 (MQ=255)
gccGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGt < 1:3737724/91‑1 (MQ=255)
tCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTg < 2:7081834/93‑1 (MQ=255)
gCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGaa > 2:6217168/1‑93 (MQ=255)
gCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGaa > 1:6315273/1‑93 (MQ=255)
ttCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGt > 1:3288288/1‑93 (MQ=255)
ttCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGt > 1:5158263/1‑93 (MQ=255)
ttCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGt < 1:1183715/93‑1 (MQ=255)
tCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGtc < 1:2017959/93‑1 (MQ=255)
|
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTC > NC_000913/2872730‑2872911
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTCTTCA > NC_000913/2872729‑2872915
|
CTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGC < SRR4302542.7421290/94‑1 (MQ=60)
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCG < SRR4302542.4494506/94‑1 (MQ=60)
TGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCG < SRR4302542.1531747/94‑1 (MQ=60)
GGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGC > SRR4302542.7327155/1‑94 (MQ=60)
GGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGC > SRR4302542.5524649/1‑94 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG > SRR4302542.5870210/1‑94 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG > SRR4302542.4220207/1‑94 (MQ=60)
ATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAG < SRR4302542.2868662/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.1081755/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG > SRR4302542.5368330/1‑94 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.3762512/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAG < SRR4302542.1304201/94‑1 (MQ=60)
CTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACCTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAG < SRR4302542.6271355/94‑1 (MQ=60)
TCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGA > SRR4302542.4734475/1‑94 (MQ=60)
TCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGA > SRR4302542.787604/1‑94 (MQ=60)
CCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAG < SRR4302542.1685788/94‑1 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGC > SRR4302542.4773735/1‑94 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGC > SRR4302542.1751645/1‑94 (MQ=60)
CACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGC > SRR4302542.6616230/1‑94 (MQ=60)
ACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCG < SRR4302542.2204707/94‑1 (MQ=60)
CGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGG < SRR4302542.4511774/94‑1 (MQ=60)
CGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGG > SRR4302542.6926079/1‑94 (MQ=60)
TTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCAC < SRR4302542.4420513/94‑1 (MQ=60)
TTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCAC < SRR4302542.1965120/94‑1 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA > SRR4302542.6866340/1‑94 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA > SRR4302542.928063/1‑94 (MQ=60)
TTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACA < SRR4302542.2719456/94‑1 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG < SRR4302542.1007150/94‑1 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG < SRR4302542.1615632/94‑1 (MQ=60)
CAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAG > SRR4302542.1572164/1‑94 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC > SRR4302542.5630120/1‑94 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC > SRR4302542.4294382/1‑94 (MQ=60)
AGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGC < SRR4302542.2285564/94‑1 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCG > SRR4302542.7548237/1‑94 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG < SRR4302542.7156654/94‑1 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG > SRR4302542.1843813/1‑94 (MQ=60)
GCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCG < SRR4302542.570328/94‑1 (MQ=60)
CACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGG > SRR4302542.7084479/1‑94 (MQ=60)
CACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGG > SRR4302542.1712282/1‑94 (MQ=60)
ACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGA < SRR4302542.4066694/94‑1 (MQ=60)
CTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGAT > SRR4302542.2988318/1‑94 (MQ=60)
CTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGAT < SRR4302542.2599677/94‑1 (MQ=60)
TCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATAT < SRR4302542.5606340/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC > SRR4302542.6971082/1‑94 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.2248895/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.6485056/94‑1 (MQ=60)
GAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCC < SRR4302542.1927540/94‑1 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA < SRR4302542.5074965/94‑1 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA > SRR4302542.6974664/1‑94 (MQ=60)
AGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCA > SRR4302542.3368652/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.2904638/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.4107364/1‑94 (MQ=60)
CAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGA > SRR4302542.1652209/1‑94 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT > SRR4302542.2342238/1‑94 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT < SRR4302542.6124578/94‑1 (MQ=60)
AGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGAT > SRR4302542.1337311/1‑94 (MQ=60)
TGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTA < SRR4302542.2958026/94‑1 (MQ=60)
TGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTA > SRR4302542.7297904/1‑94 (MQ=60)
GTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTAC > SRR4302542.5746747/1‑94 (MQ=60)
TCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACC < SRR4302542.2595555/94‑1 (MQ=60)
TCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACC > SRR4302542.937005/1‑94 (MQ=60)
CGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCC < SRR4302542.6408841/94‑1 (MQ=60)
GGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCG < SRR4302542.2180256/94‑1 (MQ=60)
ACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGC < SRR4302542.5634527/94‑1 (MQ=60)
ACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGC < SRR4302542.3404457/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.575431/1‑94 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.2645199/1‑94 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA < SRR4302542.5170220/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA < SRR4302542.2452290/94‑1 (MQ=60)
CCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCA > SRR4302542.2284362/1‑94 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.2779096/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4169229/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4986127/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.2392998/94‑1 (MQ=60)
CGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAG < SRR4302542.4205243/94‑1 (MQ=60)
GCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGC > SRR4302542.2147988/1‑94 (MQ=60)
CTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCT < SRR4302542.3359299/94‑1 (MQ=60)
TGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTG > SRR4302542.958823/1‑94 (MQ=60)
TGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTG > SRR4302542.6087912/1‑94 (MQ=60)
GTATCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGC > SRR4302542.776135/1‑94 (MQ=60)
ACCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCC > SRR4302542.19023/1‑94 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG > SRR4302542.958266/1‑94 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.961344/94‑1 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.2895142/94‑1 (MQ=60)
CCACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCG < SRR4302542.2562404/94‑1 (MQ=60)
CACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGG > SRR4302542.302046/1‑94 (MQ=60)
CACGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGG > SRR4302542.1624305/1‑94 (MQ=60)
CGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCA > SRR4302542.3285989/1‑94 (MQ=60)
CGGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCA > SRR4302542.5932753/1‑94 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA > SRR4302542.2182823/1‑94 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA < SRR4302542.3515026/94‑1 (MQ=60)
GGCATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAA > SRR4302542.1814062/1‑94 (MQ=60)
CATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAG < SRR4302542.7087928/94‑1 (MQ=60)
CATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAG < SRR4302542.1735594/94‑1 (MQ=60)
ATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGG > SRR4302542.6950126/1‑94 (MQ=60)
ATACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGG > SRR4302542.5177232/1‑94 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT < SRR4302542.3632041/94‑1 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT < SRR4302542.858752/94‑1 (MQ=60)
TACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGT > SRR4302542.4477663/1‑94 (MQ=60)
ACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTC > SRR4302542.403087/1‑94 (MQ=60)
ACTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTC > SRR4302542.1166169/1‑94 (MQ=60)
CTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCA > SRR4302542.1619227/1‑94 (MQ=60)
CTTTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCA < SRR4302542.1960764/94‑1 (MQ=60)
TTCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAA > SRR4302542.2796842/1‑94 (MQ=60)
TCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAAT < SRR4302542.512503/94‑1 (MQ=60)
TCACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAAT < SRR4302542.4684567/94‑1 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.2542727/1‑94 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.7253724/1‑94 (MQ=60)
CACTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATA > SRR4302542.1303433/1‑94 (MQ=60)
ACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAA < SRR4302542.2353066/94‑1 (MQ=60)
CTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAAT > SRR4302542.1188654/1‑94 (MQ=60)
CTTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAAT < SRR4302542.6009818/94‑1 (MQ=60)
TTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATC < SRR4302542.5267285/94‑1 (MQ=60)
TTTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATC > SRR4302542.7147144/1‑94 (MQ=60)
TTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCT < SRR4302542.3163404/94‑1 (MQ=60)
TTGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCT < SRR4302542.4761646/94‑1 (MQ=60)
TGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTT < SRR4302542.6202284/94‑1 (MQ=60)
TGCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTT < SRR4302542.6884998/94‑1 (MQ=60)
GCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTC > SRR4302542.1271919/1‑94 (MQ=60)
GCGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTC < SRR4302542.5066296/94‑1 (MQ=60)
CGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA > SRR4302542.5276160/1‑94 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA > SRR4302542.1721874/1‑94 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.6778911/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.1702036/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.5827912/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.7148320/94‑1 (MQ=60)
CGATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCA < SRR4302542.5672453/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.7502436/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC > SRR4302542.1694653/1‑94 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.4776760/94‑1 (MQ=60)
GATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCAC < SRR4302542.6044678/94‑1 (MQ=60)
ATGCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACG > SRR4302542.1346761/1‑94 (MQ=60)
GCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAA < SRR4302542.2125388/94‑1 (MQ=60)
GCCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAA > SRR4302542.4522109/1‑94 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT < SRR4302542.77490/94‑1 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT > SRR4302542.7529132/1‑94 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT > SRR4302542.2068018/1‑94 (MQ=60)
CCACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAAT < SRR4302542.7116026/94‑1 (MQ=60)
CACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATA > SRR4302542.2196430/1‑94 (MQ=60)
ACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATAC < SRR4302542.3992688/94‑1 (MQ=60)
ACGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATAC < SRR4302542.5259223/94‑1 (MQ=60)
CGTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACG < SRR4302542.6560791/94‑1 (MQ=60)
GTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.6039981/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4900093/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4900092/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG < SRR4302542.3247778/94‑1 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4677294/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.2626575/1‑94 (MQ=60)
GTTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGG > SRR4302542.4682248/1‑94 (MQ=60)
TTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGG < SRR4302542.3574089/94‑1 (MQ=60)
TTGCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGG < SRR4302542.6161696/94‑1 (MQ=60)
TGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGT > SRR4302542.3549600/1‑94 (MQ=60)
TGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGT > SRR4302542.2658273/1‑94 (MQ=60)
GCCGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTG < SRR4302542.3774722/94‑1 (MQ=60)
CGCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAA > SRR4302542.6377524/1‑94 (MQ=60)
GCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAAC > SRR4302542.6012932/1‑94 (MQ=60)
GCCTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAAC < SRR4302542.2984478/94‑1 (MQ=60)
CTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGT > SRR4302542.3319336/1‑94 (MQ=60)
CTTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGT > SRR4302542.5208389/1‑94 (MQ=60)
TTCCAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTC < SRR4302542.1193926/94‑1 (MQ=60)
TCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCT < SRR4302542.2035416/94‑1 (MQ=60)
CAGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGCGAACGTCTCT > SRR4302542.2294612/1‑94 (MQ=60)
AGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTCTT > SRR4302542.7193137/1‑94 (MQ=60)
AGCGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTCTT > SRR4302542.3561494/1‑94 (MQ=60)
CGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTCTTCA > SRR4302542.6726638/1‑94 (MQ=60)
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CTGGATCTCCACGGTTTCCAGCACTTCGAGCAGTGTCGGACCGCTGTACCACGGCATACTTTCACTTTGCGATGCCACGTTGTCGCCTTCCAGTGCAGAGAGCGGCACAAAGCGGATATCCAGATTACCCGGCAGCTGCCCGGCAAAGGTCAAATAATCTTCACGAATACGGGTGAACGTCTCTTCA > NC_000913/2872729‑2872915
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
