Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,877,536 G→C A87G (GCT→GGT)  b2755 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,877,5360GC85.9% 929.8 / 126.6 312A87G (GCT→GGT) b2755hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (24/20);  new base C (140/128);  total (164/148)
Fisher's exact test for biased strand distribution p-value = 8.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01

Only 100 of 312 total aligned reads displayed.

GTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACC  >  NC_000913/2877447‑2877627
                                                                                         |                                                                                           
gtacgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCAt                                                                                          >  2:4867215/1‑93 (MQ=255)
   cgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATaaa                                                                                       <  1:2361417/93‑1 (MQ=255)
   cgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATaaa                                                                                       >  1:934270/1‑93 (MQ=255)
   cgACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATaaa                                                                                       <  1:6315800/93‑1 (MQ=255)
    gACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAac                                                                                      <  1:1248355/93‑1 (MQ=255)
    gACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAac                                                                                      >  2:5985147/1‑93 (MQ=255)
    gACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAac                                                                                      >  1:3785059/1‑93 (MQ=255)
      ccTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAacac                                                                                    >  2:2518410/1‑93 (MQ=255)
      ccTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAacac                                                                                    <  2:1070804/93‑1 (MQ=255)
      ccTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAacac                                                                                    <  1:1572151/93‑1 (MQ=255)
       cTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACg                                                                                   >  1:427452/1‑93 (MQ=255)
        ttCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGa                                                                                  >  1:4768171/1‑93 (MQ=255)
         tCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGaa                                                                                 <  2:4991107/93‑1 (MQ=255)
         tCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGaa                                                                                 <  2:5405894/93‑1 (MQ=255)
           aGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACGAGAACCATAAACACGAACg                                                                               >  1:5722610/1‑93 (MQ=255)
                cAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGc                                                                          >  1:2422497/1‑93 (MQ=255)
                cAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGc                                                                          >  1:4604356/1‑93 (MQ=255)
                 aaaTCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCt                                                                         >  2:4559163/1‑93 (MQ=255)
                  aaTCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCtt                                                                        >  2:4225759/1‑93 (MQ=255)
                  aaTCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCtt                                                                        >  2:444626/1‑93 (MQ=255)
                   aTCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTc                                                                       >  2:4299416/1‑93 (MQ=255)
                    tCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTcc                                                                      >  2:3350537/1‑93 (MQ=255)
                    tCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTcc                                                                      >  2:3702120/1‑93 (MQ=255)
                     cTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTccc                                                                     <  1:1987733/93‑1 (MQ=255)
                     cTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTccc                                                                     >  2:662907/1‑93 (MQ=255)
                     cTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTccc                                                                     <  2:236447/93‑1 (MQ=255)
                     cTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTccc                                                                     >  1:5605025/1‑93 (MQ=255)
                     cTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTccc                                                                     <  1:4528243/93‑1 (MQ=255)
                      ttCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTcccc                                                                    <  2:4749036/93‑1 (MQ=255)
                       tCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCCCCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTccccc                                                                   <  1:7467847/93‑1 (MQ=255)
                       tCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTccccc                                                                   <  2:5614126/93‑1 (MQ=255)
                           ccAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCcccaccc                                                               <  1:3721100/93‑1 (MQ=255)
                            cAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCcccaccca                                                              <  1:1951117/93‑1 (MQ=255)
                            cAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCcccaccca                                                              <  2:1364796/93‑1 (MQ=255)
                            cAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCcccaccca                                                              <  2:5832312/93‑1 (MQ=255)
                             agagCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCAt                                                             >  1:172392/1‑93 (MQ=255)
                               agCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATAc                                                           <  2:3621705/93‑1 (MQ=255)
                                gCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATAcc                                                          >  1:1012986/1‑93 (MQ=255)
                                gCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATAcc                                                          >  1:3614244/1‑93 (MQ=255)
                                gCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATAcc                                                          >  1:7168080/1‑93 (MQ=255)
                                gCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATAcc                                                          >  1:6528138/1‑93 (MQ=255)
                                      tttGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAAt                                                    <  1:1299617/93‑1 (MQ=255)
                                         gCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCGGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGtt                                                 >  2:7254205/1‑93 (MQ=255)
                                         gCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGtt                                                 <  1:4319988/93‑1 (MQ=255)
                                          ccTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTc                                                <  2:690848/93‑1 (MQ=255)
                                          ccTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTc                                                <  1:2208159/93‑1 (MQ=255)
                                           cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTcc                                               <  1:3424405/93‑1 (MQ=255)
                                           cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTcc                                               <  1:5813789/93‑1 (MQ=255)
                                           cTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTcc                                               <  1:4717415/93‑1 (MQ=255)
                                            tGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCa                                              >  1:5193354/1‑93 (MQ=255)
                                            tGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCa                                              <  2:5091612/93‑1 (MQ=255)
                                            tGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCa                                              >  2:6854455/1‑93 (MQ=255)
                                             gATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCaa                                             <  1:3892319/93‑1 (MQ=255)
                                             gATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCaa                                             <  2:621864/93‑1 (MQ=255)
                                              aTAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAc                                            <  1:2835743/93‑1 (MQ=255)
                                              aTAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAc                                            <  2:2587802/93‑1 (MQ=255)
                                               tAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACt                                           <  2:3825145/93‑1 (MQ=255)
                                               tAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACt                                           >  1:590787/1‑93 (MQ=255)
                                                 gagCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTg                                         >  1:3261470/1‑93 (MQ=255)
                                                  agcagcTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTgc                                        <  1:4870906/93‑1 (MQ=255)
                                                     agcTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCa                                     <  2:3099265/93‑1 (MQ=255)
                                                     agcTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCa                                     <  2:741250/93‑1 (MQ=255)
                                                       cTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGc                                   >  2:1882564/1‑93 (MQ=255)
                                                       cTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGc                                   <  1:616403/93‑1 (MQ=255)
                                                       cTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGc                                   <  1:1819674/93‑1 (MQ=255)
                                                        ttATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGcc                                  >  2:3455595/1‑93 (MQ=255)
                                                        ttATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGcc                                  <  1:145656/93‑1 (MQ=255)
                                                         tATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCa                                 <  2:1722449/93‑1 (MQ=255)
                                                         tATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCa                                 >  2:3549821/1‑93 (MQ=255)
                                                          aTCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAg                                >  1:7526677/1‑93 (MQ=255)
                                                           tCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAgg                               <  2:6304815/93‑1 (MQ=255)
                                                            cTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGc                              >  2:5703737/1‑93 (MQ=255)
                                                             tGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCg                             >  1:6687531/1‑93 (MQ=255)
                                                               aaCGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTa                           >  2:2006829/1‑93 (MQ=255)
                                                               aaCGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTa                           <  1:7040483/93‑1 (MQ=255)
                                                                aCGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTAc                          >  1:4088847/1‑93 (MQ=255)
                                                                aCGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTAc                          <  2:5131648/93‑1 (MQ=255)
                                                                aCGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTAc                          <  1:5408623/93‑1 (MQ=255)
                                                                  gcgcACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAg                        >  2:6457535/1‑93 (MQ=255)
                                                                   cgcACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGc                       <  2:3132631/93‑1 (MQ=255)
                                                                    gcACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCt                      >  1:268325/1‑93 (MQ=255)
                                                                      aCCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGc                    >  2:2758524/1‑93 (MQ=255)
                                                                       ccTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCCGCCCGGCGTACAGCTGCa                   >  1:3006555/1‑93 (MQ=255)
                                                                       ccTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCa                   >  1:2612531/1‑93 (MQ=255)
                                                                       ccTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCa                   <  1:5561069/93‑1 (MQ=255)
                                                                        cTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAt                  >  2:1489152/1‑93 (MQ=255)
                                                                         tCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATg                 >  1:3474021/1‑93 (MQ=255)
                                                                         tCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATg                 >  1:3332313/1‑93 (MQ=255)
                                                                         tCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATg                 >  2:2029672/1‑93 (MQ=255)
                                                                          ccAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGc                <  1:3947035/93‑1 (MQ=255)
                                                                          ccAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGc                <  2:2736382/93‑1 (MQ=255)
                                                                            aGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGa              >  1:7355930/1‑93 (MQ=255)
                                                                             ggCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCTCCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaa             <  2:2459143/93‑1 (MQ=255)
                                                                              gCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGaaa            >  1:4515510/1‑93 (MQ=255)
                                                                               cTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAc           >  1:7182428/1‑93 (MQ=255)
                                                                                tGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAcc          <  2:5545631/93‑1 (MQ=255)
                                                                                    cAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCgtg      >  2:5172259/1‑93 (MQ=255)
                                                                                     aGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCgtgt     >  1:5029414/1‑93 (MQ=255)
                                                                                      gAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGTGTACAGCTGCATGCGAAACCCGTGTa    <  2:1593161/93‑1 (MQ=255)
                                                                                        aGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTAcc  <  2:7322892/93‑1 (MQ=255)
                                                                                         |                                                                                           
GTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACC  >  NC_000913/2877447‑2877627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  NC_000913/2877443‑2877629
                                                                                             |                                                                                             
TTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAG                                                                                               <  SRR4302542.398488/94‑1 (MQ=60)
TTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAC                                                                                               <  SRR4302542.4304112/94‑1 (MQ=60)
TTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAC                                                                                               <  SRR4302542.359995/94‑1 (MQ=60)
   CGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCAT                                                                                            >  SRR4302542.2832082/1‑94 (MQ=60)
    GTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATA                                                                                           <  SRR4302542.3427536/94‑1 (MQ=60)
      ACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAA                                                                                         >  SRR4302542.4766643/1‑94 (MQ=60)
      ACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAA                                                                                         >  SRR4302542.942315/1‑94 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAAC                                                                                        <  SRR4302542.2381746/94‑1 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        >  SRR4302542.3822497/1‑94 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        <  SRR4302542.4556939/94‑1 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        <  SRR4302542.4875198/94‑1 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        <  SRR4302542.24281/94‑1 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        >  SRR4302542.2421386/1‑94 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        <  SRR4302542.6378057/94‑1 (MQ=60)
       CGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAAC                                                                                        <  SRR4302542.7134118/94‑1 (MQ=60)
        GACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACA                                                                                       <  SRR4302542.1259087/94‑1 (MQ=60)
        GACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACA                                                                                       <  SRR4302542.1656732/94‑1 (MQ=60)
         ACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACAC                                                                                      <  SRR4302542.757445/94‑1 (MQ=60)
          CCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACG                                                                                     <  SRR4302542.1585728/94‑1 (MQ=60)
          CCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACG                                                                                     >  SRR4302542.6248803/1‑94 (MQ=60)
          CCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACG                                                                                     >  SRR4302542.431146/1‑94 (MQ=60)
           CTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGA                                                                                    >  SRR4302542.4814648/1‑94 (MQ=60)
            TTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAA                                                                                   >  SRR4302542.4332112/1‑94 (MQ=60)
            TTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAA                                                                                   <  SRR4302542.3865446/94‑1 (MQ=60)
              CAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACGAGAACCATAAACACGAACG                                                                                 >  SRR4302542.5778154/1‑94 (MQ=60)
               AGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGC                                                                                <  SRR4302542.3123317/94‑1 (MQ=60)
                 ACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCC                                                                              <  SRR4302542.7252701/94‑1 (MQ=60)
                 ACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCC                                                                              >  SRR4302542.4571363/1‑94 (MQ=60)
                  CGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCG                                                                             <  SRR4302542.5313449/94‑1 (MQ=60)
                  CGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCG                                                                             <  SRR4302542.5204223/94‑1 (MQ=60)
                  CGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCG                                                                             >  SRR4302542.199945/1‑94 (MQ=60)
                   GCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGC                                                                            >  SRR4302542.1759686/1‑94 (MQ=60)
                   GCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGC                                                                            >  SRR4302542.2313490/1‑94 (MQ=60)
                   GCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGC                                                                            >  SRR4302542.4649356/1‑94 (MQ=60)
                   GCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGC                                                                            >  SRR4302542.2446056/1‑94 (MQ=60)
                    CAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCT                                                                           >  SRR4302542.4392753/1‑94 (MQ=60)
                     AAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTT                                                                          >  SRR4302542.174542/1‑94 (MQ=60)
                     AAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTT                                                                          >  SRR4302542.2165185/1‑94 (MQ=60)
                     AAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTT                                                                          >  SRR4302542.3297041/1‑94 (MQ=60)
                     AAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTT                                                                          >  SRR4302542.6341645/1‑94 (MQ=60)
                       ATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTTAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCC                                                                        <  SRR4302542.7372557/94‑1 (MQ=60)
                       ATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCC                                                                        <  SRR4302542.5945449/94‑1 (MQ=60)
                       ATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCC                                                                        <  SRR4302542.4118451/94‑1 (MQ=60)
                       ATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCC                                                                        <  SRR4302542.1360707/94‑1 (MQ=60)
                       ATCCTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCC                                                                        >  SRR4302542.1504737/1‑94 (MQ=60)
                        TCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCC                                                                       >  SRR4302542.5659479/1‑94 (MQ=60)
                         CTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCC                                                                      <  SRR4302542.2004877/94‑1 (MQ=60)
                         CTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCC                                                                      <  SRR4302542.3218155/94‑1 (MQ=60)
                         CTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCC                                                                      <  SRR4302542.4572596/94‑1 (MQ=60)
                          TTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCC                                                                     >  SRR4302542.6215560/1‑94 (MQ=60)
                           TCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCCCCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCA                                                                    <  SRR4302542.7541016/94‑1 (MQ=60)
                           TCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCA                                                                    <  SRR4302542.960061/94‑1 (MQ=60)
                           TCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCA                                                                    <  SRR4302542.4676805/94‑1 (MQ=60)
                             ATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACC                                                                  >  SRR4302542.215498/1‑94 (MQ=60)
                             ATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACC                                                                  >  SRR4302542.3806731/1‑94 (MQ=60)
                               CCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCA                                                                <  SRR4302542.395936/94‑1 (MQ=60)
                               CCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCA                                                                >  SRR4302542.6660776/1‑94 (MQ=60)
                               CCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCA                                                                <  SRR4302542.3757915/94‑1 (MQ=60)
                                CAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCAT                                                               <  SRR4302542.1967995/94‑1 (MQ=60)
                                CAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCAT                                                               <  SRR4302542.2939459/94‑1 (MQ=60)
                                CAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCAT                                                               >  SRR4302542.173842/1‑94 (MQ=60)
                                 AGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATA                                                              >  SRR4302542.4575515/1‑94 (MQ=60)
                                 AGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATA                                                              >  SRR4302542.5034953/1‑94 (MQ=60)
                                 AGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATA                                                              >  SRR4302542.4032780/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.6592478/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.7238394/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.1021712/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.3762949/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.3647925/1‑94 (MQ=60)
                                   AGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACC                                                            >  SRR4302542.3312406/1‑94 (MQ=60)
                                    GCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCA                                                           >  SRR4302542.1290157/1‑94 (MQ=60)
                                       AGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACA                                                        <  SRR4302542.3686656/94‑1 (MQ=60)
                                        GTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAA                                                       <  SRR4302542.4607033/94‑1 (MQ=60)
                                         TTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAAT                                                      <  SRR4302542.6729152/94‑1 (MQ=60)
                                          TTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATG                                                     <  SRR4302542.1310809/94‑1 (MQ=60)
                                            TGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTT                                                   <  SRR4302542.1403546/94‑1 (MQ=60)
                                             GCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTC                                                  <  SRR4302542.4362463/94‑1 (MQ=60)
                                              CCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCC                                                 <  SRR4302542.2227162/94‑1 (MQ=60)
                                              CCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCC                                                 <  SRR4302542.3444872/94‑1 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                >  SRR4302542.5243812/1‑94 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                >  SRR4302542.7480315/1‑94 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                >  SRR4302542.2858614/1‑94 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                <  SRR4302542.4763404/94‑1 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                <  SRR4302542.5870205/94‑1 (MQ=60)
                                               CTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCA                                                <  SRR4302542.3456480/94‑1 (MQ=60)
                                                 GATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAC                                              <  SRR4302542.215030/94‑1 (MQ=60)
                                                 GATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAC                                              <  SRR4302542.3930747/94‑1 (MQ=60)
                                                 GATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAAC                                              >  SRR4302542.5251135/1‑94 (MQ=60)
                                                  ATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACT                                             <  SRR4302542.5469639/94‑1 (MQ=60)
                                                  ATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACT                                             <  SRR4302542.2863003/94‑1 (MQ=60)
                                                  ATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACT                                             >  SRR4302542.595879/1‑94 (MQ=60)
                                                  ATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACT                                             >  SRR4302542.6760886/1‑94 (MQ=60)
                                                  ATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACT                                             <  SRR4302542.7605744/94‑1 (MQ=60)
                                                   TAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTT                                            >  SRR4302542.3623797/1‑94 (MQ=60)
                                                   TAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTT                                            <  SRR4302542.5845061/94‑1 (MQ=60)
                                                    AGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTG                                           >  SRR4302542.3292272/1‑94 (MQ=60)
                                                    AGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTG                                           >  SRR4302542.5804579/1‑94 (MQ=60)
                                                    AGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTG                                           >  SRR4302542.416182/1‑94 (MQ=60)
                                                      AGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCG                                         >  SRR4302542.6170518/1‑94 (MQ=60)
                                                      AGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCG                                         >  SRR4302542.100142/1‑94 (MQ=60)
                                                      AGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCG                                         <  SRR4302542.4918321/94‑1 (MQ=60)
                                                        CAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCA                                       >  SRR4302542.4729462/1‑94 (MQ=60)
                                                         AGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAG                                      <  SRR4302542.3486376/94‑1 (MQ=60)
                                                         AGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAG                                      >  SRR4302542.6475890/1‑94 (MQ=60)
                                                          GCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGC                                     >  SRR4302542.4169143/1‑94 (MQ=60)
                                                          GCTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGC                                     >  SRR4302542.1118667/1‑94 (MQ=60)
                                                           CTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCC                                    <  SRR4302542.621703/94‑1 (MQ=60)
                                                           CTTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCC                                    <  SRR4302542.1835430/94‑1 (MQ=60)
                                                            TTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCA                                   >  SRR4302542.6550790/1‑94 (MQ=60)
                                                            TTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCA                                   >  SRR4302542.1477200/1‑94 (MQ=60)
                                                            TTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCA                                   <  SRR4302542.2244977/94‑1 (MQ=60)
                                                            TTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCA                                   >  SRR4302542.5632905/1‑94 (MQ=60)
                                                            TTATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCA                                   <  SRR4302542.146878/94‑1 (MQ=60)
                                                             TATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAG                                  >  SRR4302542.7600673/1‑94 (MQ=60)
                                                             TATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAG                                  >  SRR4302542.3655629/1‑94 (MQ=60)
                                                             TATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAG                                  >  SRR4302542.4986643/1‑94 (MQ=60)
                                                              ATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGG                                 >  SRR4302542.3615774/1‑94 (MQ=60)
                                                              ATCTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGG                                 <  SRR4302542.4561942/94‑1 (MQ=60)
                                                                CTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCG                               <  SRR4302542.5107762/94‑1 (MQ=60)
                                                                CTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCG                               >  SRR4302542.6753404/1‑94 (MQ=60)
                                                                CTGAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCG                               >  SRR4302542.4348448/1‑94 (MQ=60)
                                                                  GAACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTA                             >  SRR4302542.7567119/1‑94 (MQ=60)
                                                                   AACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTAC                            <  SRR4302542.7109634/94‑1 (MQ=60)
                                                                   AACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTAC                            >  SRR4302542.4129177/1‑94 (MQ=60)
                                                                    ACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACA                           <  SRR4302542.5461157/94‑1 (MQ=60)
                                                                    ACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACA                           <  SRR4302542.4789657/94‑1 (MQ=60)
                                                                    ACGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACA                           >  SRR4302542.4909974/1‑94 (MQ=60)
                                                                     CGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAG                          >  SRR4302542.4067768/1‑94 (MQ=60)
                                                                     CGCGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAG                          >  SRR4302542.3022917/1‑94 (MQ=60)
                                                                       CGCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCT                        >  SRR4302542.270610/1‑94 (MQ=60)
                                                                        GCACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTG                       >  SRR4302542.3311730/1‑94 (MQ=60)
                                                                          ACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCCGCCCGGCGTACAGCTGCA                     >  SRR4302542.3035303/1‑94 (MQ=60)
                                                                          ACCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCA                     >  SRR4302542.2637781/1‑94 (MQ=60)
                                                                           CCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAT                    <  SRR4302542.2503950/94‑1 (MQ=60)
                                                                           CCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAT                    <  SRR4302542.748263/94‑1 (MQ=60)
                                                                           CCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAT                    <  SRR4302542.5615101/94‑1 (MQ=60)
                                                                           CCTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCAT                    >  SRR4302542.6777704/1‑94 (MQ=60)
                                                                            CTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATG                   >  SRR4302542.3363674/1‑94 (MQ=60)
                                                                            CTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATG                   >  SRR4302542.270296/1‑94 (MQ=60)
                                                                            CTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATG                   <  SRR4302542.5689612/94‑1 (MQ=60)
                                                                            CTCCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATG                   >  SRR4302542.3506541/1‑94 (MQ=60)
                                                                             TCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGC                  <  SRR4302542.6010971/94‑1 (MQ=60)
                                                                              CCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCG                 >  SRR4302542.7263919/1‑94 (MQ=60)
                                                                              CCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCG                 <  SRR4302542.3986009/94‑1 (MQ=60)
                                                                              CCAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCG                 <  SRR4302542.5651091/94‑1 (MQ=60)
                                                                               CAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGA                <  SRR4302542.71900/94‑1 (MQ=60)
                                                                               CAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGA                >  SRR4302542.7427957/1‑94 (MQ=60)
                                                                               CAGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGA                >  SRR4302542.5001055/1‑94 (MQ=60)
                                                                                AGGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAA               >  SRR4302542.397440/1‑94 (MQ=60)
                                                                                 GGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAA              >  SRR4302542.4559759/1‑94 (MQ=60)
                                                                                 GGCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAA              >  SRR4302542.1945868/1‑94 (MQ=60)
                                                                                  GCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAC             >  SRR4302542.7252862/1‑94 (MQ=60)
                                                                                  GCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAC             <  SRR4302542.1688576/94‑1 (MQ=60)
                                                                                  GCTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAAC             <  SRR4302542.1302657/94‑1 (MQ=60)
                                                                                   CTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACC            <  SRR4302542.5474122/94‑1 (MQ=60)
                                                                                   CTGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACC            <  SRR4302542.3456767/94‑1 (MQ=60)
                                                                                    TGACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCC           <  SRR4302542.5761756/94‑1 (MQ=60)
                                                                                     GACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCG          <  SRR4302542.7488009/94‑1 (MQ=60)
                                                                                     GACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCG          <  SRR4302542.7238569/94‑1 (MQ=60)
                                                                                      ACCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGT         <  SRR4302542.1970297/94‑1 (MQ=60)
                                                                                       CCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTG        >  SRR4302542.934450/1‑94 (MQ=60)
                                                                                       CCAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTG        >  SRR4302542.2648963/1‑94 (MQ=60)
                                                                                        CAGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGT       >  SRR4302542.5078239/1‑94 (MQ=60)
                                                                                         AGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTA      >  SRR4302542.5882384/1‑94 (MQ=60)
                                                                                         AGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTA      <  SRR4302542.1959107/94‑1 (MQ=60)
                                                                                         AGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTA      >  SRR4302542.1042762/1‑94 (MQ=60)
                                                                                         AGAACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTA      >  SRR4302542.2474414/1‑94 (MQ=60)
                                                                                           AAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACC    >  SRR4302542.3929893/1‑94 (MQ=60)
                                                                                           AACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACC    >  SRR4302542.6866637/1‑94 (MQ=60)
                                                                                            ACCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCA   >  SRR4302542.4060540/1‑94 (MQ=60)
                                                                                             CCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  SRR4302542.3809890/1‑94 (MQ=60)
                                                                                             CCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  <  SRR4302542.3273010/94‑1 (MQ=60)
                                                                                             CCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  SRR4302542.4005910/1‑94 (MQ=60)
                                                                                             CCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  SRR4302542.5017341/1‑94 (MQ=60)
                                                                                             CCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  SRR4302542.6798641/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTTTTGCCTGATAGAGCAGCTTATCTGAACGCGCACCTCCAGGCTGACCAGAAGCATAAACACGAACGCCCGCTTCCCCCACCCATACCAACAATGTTCCAACTTGCGCAGCCAGGCGTACAGCTGCATGCGAAACCCGTGTACCAG  >  NC_000913/2877443‑2877629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑