Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,013,656 |
T→C |
M159T (ATG→ACG) |
ygfJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,013,656 | 0 | T | C | 85.0%
| 699.7
/ 115.6
| 299 | M159T (ATG→ACG) | ygfJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (17/28); new base C (109/145); total (126/173) |
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01 |
Only 100 of 299 total aligned reads displayed.
TCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGT > NC_000913/3013566‑3013745
|
tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACgg < 2:3300894/93‑1 (MQ=255)
tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACgg > 2:3656454/1‑93 (MQ=255)
cccGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGga > 1:2024154/1‑93 (MQ=255)
ccGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGgag < 2:3528323/93‑1 (MQ=255)
ccGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGgag > 1:5778787/1‑93 (MQ=255)
gCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATc < 1:5205367/93‑1 (MQ=255)
gCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATc < 1:5433423/93‑1 (MQ=255)
gCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATc < 1:6003368/93‑1 (MQ=255)
gCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATc < 2:3766231/93‑1 (MQ=255)
ccATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCa > 1:2733290/1‑93 (MQ=255)
ccATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCa > 1:1618252/1‑93 (MQ=255)
tCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCatta > 2:2720509/1‑93 (MQ=255)
tCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCatta > 2:6231238/1‑93 (MQ=255)
tCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCatta > 1:5917845/1‑93 (MQ=255)
ccGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCattat > 1:55632/1‑93 (MQ=255)
ccGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCattat < 2:6144040/93‑1 (MQ=255)
ccGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCattat < 1:4971139/93‑1 (MQ=255)
cGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCattatt < 1:6276486/93‑1 (MQ=255)
ttttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCg < 2:7362621/93‑1 (MQ=255)
ttttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCg < 1:929217/93‑1 (MQ=255)
ttttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCg > 1:39779/1‑93 (MQ=255)
ttttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCg > 2:2048615/1‑93 (MQ=255)
ttttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCg > 2:3711433/1‑93 (MQ=255)
tttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGt < 2:4346689/93‑1 (MQ=255)
tttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGt < 1:2229969/93‑1 (MQ=255)
aGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGa < 2:2111404/93‑1 (MQ=255)
aGTGTCAAAACCATACCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGa < 1:4830166/93‑1 (MQ=255)
gtgtCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGaa > 1:1418421/1‑93 (MQ=255)
tCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATa > 1:1199983/1‑93 (MQ=255)
tCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATa < 1:4730844/93‑1 (MQ=255)
tCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATa < 1:4537107/93‑1 (MQ=255)
aaaaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGa < 1:6190053/93‑1 (MQ=255)
aaaaCCATCCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGa < 1:6592081/93‑1 (MQ=255)
aaaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaa < 1:2526491/93‑1 (MQ=255)
aaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaaa > 2:5531306/1‑93 (MQ=255)
aaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaaa < 1:5512139/93‑1 (MQ=255)
aaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaaa > 2:2429130/1‑93 (MQ=255)
aaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaaa < 2:6178076/93‑1 (MQ=255)
aaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGaaa < 2:6649607/93‑1 (MQ=255)
ccATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAAt > 2:6269200/1‑93 (MQ=255)
ccATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAAt > 2:1380227/1‑93 (MQ=255)
aTGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGc < 2:5972946/93‑1 (MQ=255)
aTGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGc < 1:6929742/93‑1 (MQ=255)
tGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCa < 1:1798705/93‑1 (MQ=255)
tGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCa > 1:6408604/1‑93 (MQ=255)
tGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCa > 2:342864/1‑93 (MQ=255)
gCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAg > 2:845004/1‑93 (MQ=255)
cTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGaa > 1:4238165/1‑93 (MQ=255)
tGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGaaa > 1:2987056/1‑93 (MQ=255)
tGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGaaa > 2:6834104/1‑93 (MQ=255)
gATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaat > 1:2645014/1‑93 (MQ=255)
gATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaat > 2:1546829/1‑93 (MQ=255)
tGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaataa > 2:509415/1‑93 (MQ=255)
gCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCGCTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaataat > 2:1886469/1‑93 (MQ=255)
gCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaataat < 1:3498729/93‑1 (MQ=255)
aGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAAttt > 2:392822/1‑93 (MQ=255)
gCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTa < 2:3218386/93‑1 (MQ=255)
gCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTa < 1:344758/93‑1 (MQ=255)
aaTCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGa < 1:3607381/93‑1 (MQ=255)
aTCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGat > 1:7479400/1‑93 (MQ=255)
aTCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGat < 2:2966217/93‑1 (MQ=255)
aTCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGat < 1:5653239/93‑1 (MQ=255)
tCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGata < 2:5375078/93‑1 (MQ=255)
tCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGata > 1:1244246/1‑93 (MQ=255)
ccAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGatat > 2:4852464/1‑93 (MQ=255)
cAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATAtt > 2:5445874/1‑93 (MQ=255)
gACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATa < 1:3055208/93‑1 (MQ=255)
aCCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATAc < 1:3687073/93‑1 (MQ=255)
cccAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACt < 1:3892920/93‑1 (MQ=255)
cAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTcc < 2:4171417/93‑1 (MQ=255)
aTGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCgg > 1:6769451/1‑93 (MQ=255)
gTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGgac < 1:2402223/93‑1 (MQ=255)
ccAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACt > 2:1100341/1‑93 (MQ=255)
aaTATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACttt > 1:722001/1‑93 (MQ=255)
atatGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTtta < 2:1915892/93‑1 (MQ=255)
atGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatt < 1:3116694/93‑1 (MQ=255)
tGCGTCAGGCACTCCTTATGGGAGGTCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGGCTttatta > 1:6171899/1‑93 (MQ=255)
tGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatta < 1:192925/93‑1 (MQ=255)
tGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatta < 2:76100/93‑1 (MQ=255)
tGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatta > 2:1590160/1‑93 (MQ=255)
gCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTAc < 1:7067436/93‑1 (MQ=255)
cGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACa < 2:2265018/93‑1 (MQ=255)
gTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAg < 2:5835479/93‑1 (MQ=255)
gTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAg > 2:7312983/1‑93 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa < 2:477210/93‑1 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa < 2:4051787/93‑1 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa < 1:5255981/93‑1 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa > 2:2792210/1‑93 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa > 1:4359367/1‑93 (MQ=255)
ggCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa < 2:7193016/93‑1 (MQ=255)
gCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAg < 2:1448420/93‑1 (MQ=255)
aCTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGa > 2:3000429/1‑93 (MQ=255)
aCTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGa < 1:5038203/93‑1 (MQ=255)
cTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaa > 2:7087931/1‑93 (MQ=255)
cTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaa > 2:3833057/1‑93 (MQ=255)
cTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaa < 2:6061884/93‑1 (MQ=255)
cTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaa < 2:5253253/93‑1 (MQ=255)
tCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGTAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaaa > 2:5194102/1‑93 (MQ=255)
cTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAgg < 2:6565160/93‑1 (MQ=255)
cTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAgg < 2:232713/93‑1 (MQ=255)
|
TCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGT > NC_000913/3013566‑3013745
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATAC > NC_000913/3013563‑3013749
|
GCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAC < SRR4302542.2634330/94‑1 (MQ=60)
GCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAC < SRR4302542.962696/94‑1 (MQ=60)
GCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAC < SRR4302542.5701932/94‑1 (MQ=60)
CATCCCCGGCCATCCGCTTTTAGTGTCCACACCATGCCTGATGCAGGCACTCCAACGACCCACTGTCACCAATATGCGTCAGGCACTCCTTACG > SRR4302542.6351189/1‑94 (MQ=60)
CATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACG > SRR4302542.1708727/1‑94 (MQ=60)
ATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGG < SRR4302542.3066701/94‑1 (MQ=60)
TCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGG < SRR4302542.1814757/94‑1 (MQ=60)
CCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGA > SRR4302542.2041663/1‑94 (MQ=60)
CCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAG < SRR4302542.2510161/94‑1 (MQ=60)
CCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAG > SRR4302542.5834891/1‑94 (MQ=60)
CCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAG < SRR4302542.6308086/94‑1 (MQ=60)
CCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGA < SRR4302542.3572466/94‑1 (MQ=60)
CCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGA < SRR4302542.5535022/94‑1 (MQ=60)
CGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGAT > SRR4302542.5650402/1‑94 (MQ=60)
GGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATC < SRR4302542.4144596/94‑1 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCA < SRR4302542.3984783/94‑1 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCA < SRR4302542.5486217/94‑1 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCA > SRR4302542.2759657/1‑94 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCA < SRR4302542.6061508/94‑1 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCA > SRR4302542.1632230/1‑94 (MQ=60)
GCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCA < SRR4302542.5255992/94‑1 (MQ=60)
CATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATT < SRR4302542.622756/94‑1 (MQ=60)
CATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATT > SRR4302542.4985971/1‑94 (MQ=60)
ATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTA > SRR4302542.5975196/1‑94 (MQ=60)
ATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTA > SRR4302542.953976/1‑94 (MQ=60)
TCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTAT < SRR4302542.7173339/94‑1 (MQ=60)
TCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTAT > SRR4302542.56087/1‑94 (MQ=60)
TCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTAT < SRR4302542.235984/94‑1 (MQ=60)
TCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTAT < SRR4302542.3405876/94‑1 (MQ=60)
CCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATT < SRR4302542.5019399/94‑1 (MQ=60)
CCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATT < SRR4302542.1232755/94‑1 (MQ=60)
CGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTC < SRR4302542.6338347/94‑1 (MQ=60)
GATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCC > SRR4302542.6773925/1‑94 (MQ=60)
ATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCG > SRR4302542.40134/1‑94 (MQ=60)
ATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCG < SRR4302542.1610463/94‑1 (MQ=60)
ATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCG < SRR4302542.4565880/94‑1 (MQ=60)
TTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGT < SRR4302542.937207/94‑1 (MQ=60)
TTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTC < SRR4302542.2249157/94‑1 (MQ=60)
TTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTC > SRR4302542.5996428/1‑94 (MQ=60)
TTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCG < SRR4302542.7165009/94‑1 (MQ=60)
TAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCTGTCGA < SRR4302542.2660544/94‑1 (MQ=60)
AGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAA < SRR4302542.6022289/94‑1 (MQ=60)
AGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAA > SRR4302542.1430701/1‑94 (MQ=60)
AGTGTCAAAACCATACCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAA < SRR4302542.4877224/94‑1 (MQ=60)
TGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGAGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAAT < SRR4302542.6272057/94‑1 (MQ=60)
GTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATA > SRR4302542.1210315/1‑94 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAG > SRR4302542.1919247/1‑94 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAG < SRR4302542.6078464/94‑1 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAG < SRR4302542.160137/94‑1 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAG > SRR4302542.748220/1‑94 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAG < SRR4302542.4581538/94‑1 (MQ=60)
TCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAG < SRR4302542.4776977/94‑1 (MQ=60)
CAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGA < SRR4302542.2739162/94‑1 (MQ=60)
AAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGTCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAA < SRR4302542.657337/94‑1 (MQ=60)
AAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAA < SRR4302542.6250241/94‑1 (MQ=60)
AAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAA > SRR4302542.4906380/1‑94 (MQ=60)
AAAACCATCCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAA < SRR4302542.6657030/94‑1 (MQ=60)
AAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAA < SRR4302542.3814305/94‑1 (MQ=60)
AAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAA < SRR4302542.2550991/94‑1 (MQ=60)
AACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAA < SRR4302542.5565706/94‑1 (MQ=60)
ACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAAT > SRR4302542.5068817/1‑94 (MQ=60)
ATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCA > SRR4302542.6471752/1‑94 (MQ=60)
ATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCA < SRR4302542.6997776/94‑1 (MQ=60)
TGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCCCTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAG < SRR4302542.2404076/94‑1 (MQ=60)
TGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAG < SRR4302542.224744/94‑1 (MQ=60)
TGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAG < SRR4302542.1814303/94‑1 (MQ=60)
TGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAG < SRR4302542.5654924/94‑1 (MQ=60)
CCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAA < SRR4302542.3057645/94‑1 (MQ=60)
CCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAA > SRR4302542.4812151/1‑94 (MQ=60)
CCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAA > SRR4302542.2037108/1‑94 (MQ=60)
CCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAA > SRR4302542.4279902/1‑94 (MQ=60)
CCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAA > SRR4302542.6552755/1‑94 (MQ=60)
CTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAA > SRR4302542.2785514/1‑94 (MQ=60)
CTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAA > SRR4302542.2945121/1‑94 (MQ=60)
CTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAA > SRR4302542.2551026/1‑94 (MQ=60)
CTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAA > SRR4302542.3015651/1‑94 (MQ=60)
TGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAAT > SRR4302542.2670553/1‑94 (MQ=60)
ATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAA < SRR4302542.4474780/94‑1 (MQ=60)
ATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAA < SRR4302542.5307000/94‑1 (MQ=60)
TGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAAT < SRR4302542.2110137/94‑1 (MQ=60)
GCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATT < SRR4302542.3531453/94‑1 (MQ=60)
CAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTT > SRR4302542.7426046/1‑94 (MQ=60)
GGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTA < SRR4302542.2482484/94‑1 (MQ=60)
GCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAG < SRR4302542.347744/94‑1 (MQ=60)
GCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAG < SRR4302542.1322974/94‑1 (MQ=60)
CAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGA > SRR4302542.5244059/1‑94 (MQ=60)
AATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGAT < SRR4302542.3640992/94‑1 (MQ=60)
AATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGAT > SRR4302542.7552706/1‑94 (MQ=60)
AATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGAT < SRR4302542.4328670/94‑1 (MQ=60)
ATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATA < SRR4302542.6454203/94‑1 (MQ=60)
ATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATA < SRR4302542.5708126/94‑1 (MQ=60)
ATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATA > SRR4302542.1254941/1‑94 (MQ=60)
CCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATT < SRR4302542.676082/94‑1 (MQ=60)
CCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATT < SRR4302542.7101931/94‑1 (MQ=60)
CCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATT > SRR4302542.6247564/1‑94 (MQ=60)
CAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTG < SRR4302542.5886514/94‑1 (MQ=60)
CAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTG > SRR4302542.984633/1‑94 (MQ=60)
CAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTG < SRR4302542.3527522/94‑1 (MQ=60)
CAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTG < SRR4302542.3604420/94‑1 (MQ=60)
AACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGA > SRR4302542.6403987/1‑94 (MQ=60)
AACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGA < SRR4302542.380174/94‑1 (MQ=60)
ACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGAT < SRR4302542.4374674/94‑1 (MQ=60)
GACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATAC < SRR4302542.927699/94‑1 (MQ=60)
GACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATAC < SRR4302542.3084357/94‑1 (MQ=60)
ACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACT < SRR4302542.5600679/94‑1 (MQ=60)
ACCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACT < SRR4302542.3723466/94‑1 (MQ=60)
CCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTC > SRR4302542.550004/1‑94 (MQ=60)
CCCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTC < SRR4302542.3931351/94‑1 (MQ=60)
CCAATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCC < SRR4302542.5268422/94‑1 (MQ=60)
AATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGG > SRR4302542.6836016/1‑94 (MQ=60)
ATGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGA > SRR4302542.5576536/1‑94 (MQ=60)
TGTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGAC < SRR4302542.4582674/94‑1 (MQ=60)
GTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACG > SRR4302542.200340/1‑94 (MQ=60)
GTCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACG < SRR4302542.2425609/94‑1 (MQ=60)
TCACCAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGA > SRR4302542.6842405/1‑94 (MQ=60)
CAATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTT > SRR4302542.728223/1‑94 (MQ=60)
AATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTA < SRR4302542.574828/94‑1 (MQ=60)
ATATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTAT < SRR4302542.2705800/94‑1 (MQ=60)
TATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATT < SRR4302542.807589/94‑1 (MQ=60)
ATGCGTCAGGCACTCCTTATGGGAGGTCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGGCTTTATTA > SRR4302542.6231715/1‑94 (MQ=60)
ATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTA < SRR4302542.3146313/94‑1 (MQ=60)
ATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTA > SRR4302542.5746532/1‑94 (MQ=60)
ATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTA > SRR4302542.5209758/1‑94 (MQ=60)
ATGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAACAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTA < SRR4302542.337139/94‑1 (MQ=60)
TGCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTAC < SRR4302542.194558/94‑1 (MQ=60)
GCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACA < SRR4302542.3672282/94‑1 (MQ=60)
GCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACA < SRR4302542.7136802/94‑1 (MQ=60)
GCGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACA < SRR4302542.5314293/94‑1 (MQ=60)
CGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAG < SRR4302542.1656651/94‑1 (MQ=60)
CGTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAG > SRR4302542.1728510/1‑94 (MQ=60)
GTCAGGCACTCCTTATGGGAGATTATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGC < SRR4302542.6882571/94‑1 (MQ=60)
GTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGC < SRR4302542.3997312/94‑1 (MQ=60)
GTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGC > SRR4302542.3657271/1‑94 (MQ=60)
GTCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGC < SRR4302542.5078758/94‑1 (MQ=60)
TCAGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCG < SRR4302542.3482853/94‑1 (MQ=60)
AGGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAA > SRR4302542.4402174/1‑94 (MQ=60)
GGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAG > SRR4302542.4866985/1‑94 (MQ=60)
GGCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAG < SRR4302542.5307065/94‑1 (MQ=60)
GCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGG < SRR4302542.58492/94‑1 (MQ=60)
GCACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGG > SRR4302542.3122231/1‑94 (MQ=60)
CACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGA < SRR4302542.3119437/94‑1 (MQ=60)
ACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAA < SRR4302542.5087117/94‑1 (MQ=60)
ACTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAA > SRR4302542.546826/1‑94 (MQ=60)
CTCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAA > SRR4302542.705672/1‑94 (MQ=60)
TCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAG < SRR4302542.4761335/94‑1 (MQ=60)
TCCTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAG < SRR4302542.6077676/94‑1 (MQ=60)
CTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGT < SRR4302542.3047246/94‑1 (MQ=60)
CTTACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGT > SRR4302542.1255633/1‑94 (MQ=60)
TTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTA < SRR4302542.424903/94‑1 (MQ=60)
TACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTAT < SRR4302542.2084200/94‑1 (MQ=60)
ACGGGAGTTCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATA < SRR4302542.1410250/94‑1 (MQ=60)
ACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATA < SRR4302542.459391/94‑1 (MQ=60)
ACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATA > SRR4302542.2188002/1‑94 (MQ=60)
ACGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATA < SRR4302542.965032/94‑1 (MQ=60)
CGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATAC > SRR4302542.4028170/1‑94 (MQ=60)
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GCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATAC > NC_000913/3013563‑3013749
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
