Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,030,024	T→C	L236P (CTG→CCG)	ygfU →	putative permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,030,024	0	T	C	83.1%	716.2 / 145.9	325	L236P (CTG→CCG)	ygfU	putative permease
Reads supporting (aligned to +/- strand): ref base T (28/27); new base C (129/141); total (157/168)
Fisher's exact test for biased strand distribution p-value = 7.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 327 total aligned reads displayed.

CGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029932‑3030116

cGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACt                                                                                              >  1:6428401/1‑93 (MQ=255)

 gTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTg                                                                                             >  2:5426292/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTgg                                                                                            >  2:4709681/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTgg                                                                                            >  2:837057/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            <  2:5310120/93‑1 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            >  1:5439697/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            <  1:4003208/93‑1 (MQ=255)

  gttatttaGGTATTTCCTTTACCGTCTTAATTTTTATCTTGCTCATTACTCGCTAGGCGAAAGGAGTTATGTCCAACGGCGCCGTATTACCgg                                                                                            <  1:5616553/92‑1 (MQ=255)

    tatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgggg                                                                                          <  1:6007083/93‑1 (MQ=255)

     atttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGa                                                                                         <  2:293340/93‑1 (MQ=255)

     atttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGa                                                                                         >  2:25684/1‑93 (MQ=255)

       ttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAtt                                                                                       <  1:98037/93‑1 (MQ=255)

       ttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAtt                                                                                       <  1:700267/93‑1 (MQ=255)

         aGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGt                                                                                     >  1:5885680/1‑93 (MQ=255)

            tATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTAtt                                                                                  <  2:6391819/93‑1 (MQ=255)

             aTCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTTGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTAttt                                                                                 >  1:6221900/1‑93 (MQ=255)

                  cTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAGTGTATTTGGCtt                                                                            <  1:2627505/93‑1 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  2:725424/1‑93 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  1:7294811/1‑93 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           <  2:6717935/93‑1 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  2:53690/1‑93 (MQ=255)

                    ttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCtttt                                                                          <  2:4366007/93‑1 (MQ=255)

                     tGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCttttt                                                                         <  2:2841887/93‑1 (MQ=255)

                      gCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTa                                                                        <  2:6482759/93‑1 (MQ=255)

                      gCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTa                                                                        <  2:3400644/93‑1 (MQ=255)

                       ccGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTAc                                                                       >  1:5167046/1‑93 (MQ=255)

                       ccGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTAc                                                                       <  2:2058343/93‑1 (MQ=255)

                        cGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACt                                                                      >  2:219470/1‑93 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACtt                                                                     <  2:6083032/93‑1 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACtt                                                                     >  2:1394965/1‑93 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACtt                                                                     >  1:3761639/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACttt                                                                    >  1:1474825/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    <  2:5587316/93‑1 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    >  2:7111068/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    <  1:4967722/93‑1 (MQ=255)

                           cTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTc                                                                   >  2:3880944/1‑93 (MQ=255)

                             tAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGt                                                                 <  2:3514642/93‑1 (MQ=255)

                             tAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGt                                                                 <  1:3330528/93‑1 (MQ=255)

                              aaTTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTg                                                                <  1:4387919/93‑1 (MQ=255)

                              aaTTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTg                                                                >  1:5405281/1‑93 (MQ=255)

                                tttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGga                                                              >  1:2905306/1‑93 (MQ=255)

                                 ttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGgat                                                             <  2:4264654/93‑1 (MQ=255)

                                 ttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgat                                                             >  2:5793420/1‑93 (MQ=255)

                                  tttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgatg                                                            <  2:6944047/93‑1 (MQ=255)

                                   ttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgatga                                                           <  2:5293996/93‑1 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:5501340/1‑93 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:3092837/1‑93 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:3838751/1‑93 (MQ=255)

                                       cTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaa                                                       <  1:5553191/93‑1 (MQ=255)

                                       cTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaa                                                       >  1:4135814/1‑93 (MQ=255)

                                        ttGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaat                                                      <  1:2773539/93‑1 (MQ=255)

                                        ttGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaat                                                      >  1:2506514/1‑93 (MQ=255)

                                           cTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGAtgaatgaa                                                   >  1:3607981/1‑93 (MQ=255)

                                              aTTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTc                                                >  1:3885076/1‑93 (MQ=255)

                                                tACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCaa                                              <  2:6314502/93‑1 (MQ=255)

                                                tACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCaa                                              >  2:5969516/1‑93 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             >  1:7337302/1‑93 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             <  1:2174259/93‑1 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             <  1:838229/93‑1 (MQ=255)

                                                  cTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAtt                                            <  2:3599793/93‑1 (MQ=255)

                                                   tCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAttt                                           >  2:3696046/1‑93 (MQ=255)

                                                   tCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAttt                                           >  1:6738144/1‑93 (MQ=255)

                                                    cGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTa                                          <  1:130412/93‑1 (MQ=255)

                                                     gCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAt                                         >  2:3021011/1‑93 (MQ=255)

                                                      cTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATc                                        <  2:4862981/93‑1 (MQ=255)

                                                      cTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATc                                        >  1:784660/1‑93 (MQ=255)

                                                       tATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATcc                                       >  1:5753871/1‑93 (MQ=255)

                                                        aTGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCg                                      >  2:2730664/1‑93 (MQ=255)

                                                        aTGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCg                                      <  1:4499824/93‑1 (MQ=255)

                                                          gCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCggg                                    >  1:440561/1‑93 (MQ=255)

                                                           cGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGc                                   <  2:1736608/93‑1 (MQ=255)

                                                            gAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCt                                  >  2:3981414/1‑93 (MQ=255)

                                                            gAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCt                                  <  1:2973315/93‑1 (MQ=255)

                                                             aaaGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTa                                 >  1:3121573/1‑93 (MQ=255)

                                                              aaGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAc                                >  1:4693094/1‑93 (MQ=255)

                                                              aaGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAc                                >  1:1003205/1‑93 (MQ=255)

                                                               aGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACa                               <  2:1247353/93‑1 (MQ=255)

                                                               aGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACa                               <  1:1607619/93‑1 (MQ=255)

                                                                ggATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACat                              <  1:1081828/93‑1 (MQ=255)

                                                                 gATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatg                             >  2:5180935/1‑93 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  1:1997029/93‑1 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  2:5875318/93‑1 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  2:1104928/93‑1 (MQ=255)

                                                                     tATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGc                         <  1:3961323/93‑1 (MQ=255)

                                                                       tGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCtt                       <  2:2342133/93‑1 (MQ=255)

                                                                         tCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCa                     <  1:4647658/93‑1 (MQ=255)

                                                                          ccAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAt                    >  2:5015350/1‑93 (MQ=255)

                                                                          ccAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAt                    <  1:6817498/93‑1 (MQ=255)

                                                                           cAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATg                   >  1:346194/1‑93 (MQ=255)

                                                                                  gCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCg            >  2:740049/1‑93 (MQ=255)

                                                                                   ccGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGa           >  1:1819633/1‑93 (MQ=255)

                                                                                    cGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAt          <  1:1726383/93‑1 (MQ=255)

                                                                                    cGTATTACCGGGGATTGTATTTGGCTTTTTACTCTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAt          <  1:7429070/93‑1 (MQ=255)

                                                                                     gTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAtt         <  1:7133446/93‑1 (MQ=255)

                                                                                      tATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTg        >  2:1586323/1‑93 (MQ=255)

                                                                                        ttACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGtt      <  2:1170159/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:6842931/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:1479361/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:2890970/93‑1 (MQ=255)

                                                                                          aCTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTAc    <  2:3222210/93‑1 (MQ=255)

CGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029932‑3030116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029931‑3030116

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACT                                                                                              >  SRR4302542.6491738/1‑94 (MQ=60)

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACC                                                                                              <  SRR4302542.5435041/94‑1 (MQ=60)

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACC                                                                                              <  SRR4302542.889668/94‑1 (MQ=60)

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACC                                                                                              <  SRR4302542.2681827/94‑1 (MQ=60)

 CGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCG                                                                                             <  SRR4302542.4530925/94‑1 (MQ=60)

  GTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGG                                                                                            >  SRR4302542.5492547/1‑94 (MQ=60)

  GTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGG                                                                                            >  SRR4302542.1334862/1‑94 (MQ=60)

  GTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGG                                                                                            <  SRR4302542.1888447/94‑1 (MQ=60)

   TTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGG                                                                                           <  SRR4302542.4042688/94‑1 (MQ=60)

   TTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGG                                                                                           <  SRR4302542.5671115/94‑1 (MQ=60)

   TTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGG                                                                                           <  SRR4302542.7086027/94‑1 (MQ=60)

   GTTATTTAGGTATTTCCTTTACCGTCTTAATTTTTATCTTGCTCATTACTCGCTAGGCGAAAGGAGTTATGTCCAACGGCGCCGTATTACCGGG                                                                                           <  SRR4302542.5671117/94‑1 (MQ=60)

    TTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGG                                                                                          <  SRR4302542.2558181/94‑1 (MQ=60)

     TATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGA                                                                                         <  SRR4302542.6065258/94‑1 (MQ=60)

      ATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAT                                                                                        >  SRR4302542.1626323/1‑94 (MQ=60)

      ATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAT                                                                                        <  SRR4302542.4723783/94‑1 (MQ=60)

        TTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTG                                                                                      <  SRR4302542.98861/94‑1 (MQ=60)

        TTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTG                                                                                      <  SRR4302542.706335/94‑1 (MQ=60)

         TAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGT                                                                                     >  SRR4302542.5942721/1‑94 (MQ=60)

          AGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTA                                                                                    <  SRR4302542.3938766/94‑1 (MQ=60)

          AGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTA                                                                                    >  SRR4302542.7405570/1‑94 (MQ=60)

           GGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTAT                                                                                   >  SRR4302542.4519624/1‑94 (MQ=60)

           GGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTAT                                                                                   >  SRR4302542.5697021/1‑94 (MQ=60)

             TATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTTGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTT                                                                                 >  SRR4302542.6283175/1‑94 (MQ=60)

             TATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTT                                                                                 >  SRR4302542.5387299/1‑94 (MQ=60)

              ATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTG                                                                                >  SRR4302542.5261059/1‑94 (MQ=60)

              ATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTG                                                                                <  SRR4302542.7060018/94‑1 (MQ=60)

              ATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTG                                                                                >  SRR4302542.4728582/1‑94 (MQ=60)

              ATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTG                                                                                >  SRR4302542.7346808/1‑94 (MQ=60)

               TCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGG                                                                               >  SRR4302542.2772834/1‑94 (MQ=60)

               TCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGG                                                                               <  SRR4302542.2810035/94‑1 (MQ=60)

               TCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGG                                                                               <  SRR4302542.1355213/94‑1 (MQ=60)

                   CTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTT                                                                           >  SRR4302542.7366913/1‑94 (MQ=60)

                   CTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTT                                                                           <  SRR4302542.6320395/94‑1 (MQ=60)

                   CTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTT                                                                           >  SRR4302542.4561820/1‑94 (MQ=60)

                   CTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTT                                                                           >  SRR4302542.7366300/1‑94 (MQ=60)

                   CTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAGTGTATTTGGCTTT                                                                           <  SRR4302542.2652889/94‑1 (MQ=60)

                      TGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTA                                                                        <  SRR4302542.3542224/94‑1 (MQ=60)

                      TGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTA                                                                        >  SRR4302542.3331610/1‑94 (MQ=60)

                      TGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTA                                                                        >  SRR4302542.4535898/1‑94 (MQ=60)

                       GCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTAC                                                                       >  SRR4302542.5217266/1‑94 (MQ=60)

                       GCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTAC                                                                       >  SRR4302542.3222986/1‑94 (MQ=60)

                       GCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTAC                                                                       >  SRR4302542.1766023/1‑94 (MQ=60)

                       GCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTAC                                                                       <  SRR4302542.681701/94‑1 (MQ=60)

                        CCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACT                                                                      >  SRR4302542.5643565/1‑94 (MQ=60)

                         CGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTT                                                                     >  SRR4302542.1906144/1‑94 (MQ=60)

                         CGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTT                                                                     <  SRR4302542.6217221/94‑1 (MQ=60)

                         CGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTT                                                                     >  SRR4302542.3798852/1‑94 (MQ=60)

                          GTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTT                                                                    >  SRR4302542.1487554/1‑94 (MQ=60)

                          GTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTT                                                                    <  SRR4302542.5479921/94‑1 (MQ=60)

                           TCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTC                                                                   <  SRR4302542.4422991/94‑1 (MQ=60)

                           TCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTC                                                                   >  SRR4302542.4774869/1‑94 (MQ=60)

                           TCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTC                                                                   <  SRR4302542.5015957/94‑1 (MQ=60)

                            CTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCG                                                                  >  SRR4302542.3767570/1‑94 (MQ=60)

                              TAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTG                                                                <  SRR4302542.3361876/94‑1 (MQ=60)

                              TAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTG                                                                >  SRR4302542.5457790/1‑94 (MQ=60)

                               AATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGG                                                               <  SRR4302542.4430965/94‑1 (MQ=60)

                               AATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGG                                                               >  SRR4302542.6796002/1‑94 (MQ=60)

                                ATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGA                                                              >  SRR4302542.2933183/1‑94 (MQ=60)

                                ATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGA                                                              >  SRR4302542.1180275/1‑94 (MQ=60)

                                ATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGA                                                              >  SRR4302542.839734/1‑94 (MQ=60)

                                 TTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAT                                                             <  SRR4302542.2916066/94‑1 (MQ=60)

                                 TTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAT                                                             <  SRR4302542.7455816/94‑1 (MQ=60)

                                 TTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAT                                                             <  SRR4302542.7155011/94‑1 (MQ=60)

                                  TTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATG                                                            <  SRR4302542.3822244/94‑1 (MQ=60)

                                  TTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATG                                                            <  SRR4302542.36982/94‑1 (MQ=60)

                                   TTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGA                                                           <  SRR4302542.5163993/94‑1 (MQ=60)

                                   TTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGA                                                           <  SRR4302542.4581555/94‑1 (MQ=60)

                                    TTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGAT                                                          <  SRR4302542.911023/94‑1 (MQ=60)

                                       TCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAA                                                       >  SRR4302542.4176562/1‑94 (MQ=60)

                                        CTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAAT                                                      <  SRR4302542.5607147/94‑1 (MQ=60)

                                        CTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAAT                                                      >  SRR4302542.2530844/1‑94 (MQ=60)

                                         TTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATG                                                     <  SRR4302542.992429/94‑1 (MQ=60)

                                         TTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATG                                                     <  SRR4302542.3399402/94‑1 (MQ=60)

                                         TTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATG                                                     <  SRR4302542.2800258/94‑1 (MQ=60)

                                          TGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGA                                                    <  SRR4302542.7415543/94‑1 (MQ=60)

                                          TGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGA                                                    <  SRR4302542.4273164/94‑1 (MQ=60)

                                           GCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAA                                                   <  SRR4302542.993781/94‑1 (MQ=60)

                                           GCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAA                                                   >  SRR4302542.3641599/1‑94 (MQ=60)

                                           GCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAA                                                   <  SRR4302542.3861656/94‑1 (MQ=60)

                                            CTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAG                                                  >  SRR4302542.7468129/1‑94 (MQ=60)

                                             TCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGT                                                 <  SRR4302542.3956527/94‑1 (MQ=60)

                                              CATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTC                                                <  SRR4302542.6005481/94‑1 (MQ=60)

                                              CATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTC                                                >  SRR4302542.3923439/1‑94 (MQ=60)

                                               ATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCA                                               <  SRR4302542.1535086/94‑1 (MQ=60)

                                               ATTACTCGCTATGCGAAAGGATTTATGTCCAACGNCGNCGTATTACCNGGGATTGTATNTGGCNTTNTANTTTCGTGNANGATGNANGNNNNCA                                               >  SRR4302542.7105433/1‑94 (MQ=60)

                                                 TACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAT                                             >  SRR4302542.7409173/1‑94 (MQ=60)

                                                 TACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAT                                             <  SRR4302542.783919/94‑1 (MQ=60)

                                                  ACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATT                                            <  SRR4302542.845475/94‑1 (MQ=60)

                                                  ACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATT                                            <  SRR4302542.2192973/94‑1 (MQ=60)

                                                   CTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTT                                           >  SRR4302542.3021392/1‑94 (MQ=60)

                                                   CTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTT                                           >  SRR4302542.6804469/1‑94 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         <  SRR4302542.131482/94‑1 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         >  SRR4302542.6293750/1‑94 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         <  SRR4302542.1708058/94‑1 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         <  SRR4302542.4435547/94‑1 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         >  SRR4302542.6963633/1‑94 (MQ=60)

                                                     CGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAT                                         >  SRR4302542.34454/1‑94 (MQ=60)

                                                      GCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATC                                        >  SRR4302542.791426/1‑94 (MQ=60)

                                                       CTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCC                                       >  SRR4302542.5809725/1‑94 (MQ=60)

                                                       CTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCC                                       <  SRR4302542.6443266/94‑1 (MQ=60)

                                                       CTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCC                                       <  SRR4302542.7238977/94‑1 (MQ=60)

                                                         ATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGG                                     <  SRR4302542.4543955/94‑1 (MQ=60)

                                                          TGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGG                                    >  SRR4302542.444379/1‑94 (MQ=60)

                                                            CGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCT                                  >  SRR4302542.5475584/1‑94 (MQ=60)

                                                            CGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCT                                  <  SRR4302542.592381/94‑1 (MQ=60)

                                                             GAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTA                                 >  SRR4302542.3151266/1‑94 (MQ=60)

                                                             GAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTA                                 >  SRR4302542.5331217/1‑94 (MQ=60)

                                                             GAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTA                                 <  SRR4302542.7532284/94‑1 (MQ=60)

                                                             GAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTA                                 <  SRR4302542.3001791/94‑1 (MQ=60)

                                                              AAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAC                                >  SRR4302542.3632665/1‑94 (MQ=60)

                                                              AAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAC                                >  SRR4302542.1011847/1‑94 (MQ=60)

                                                              AAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAC                                >  SRR4302542.5518426/1‑94 (MQ=60)

                                                              AAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAC                                >  SRR4302542.4738917/1‑94 (MQ=60)

                                                              AAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAC                                >  SRR4302542.3208818/1‑94 (MQ=60)

                                                               AAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACA                               >  SRR4302542.1760151/1‑94 (MQ=60)

                                                               AAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACA                               <  SRR4302542.4022995/94‑1 (MQ=60)

                                                                AGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACAT                              <  SRR4302542.1621505/94‑1 (MQ=60)

                                                                 GGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATG                             <  SRR4302542.1091117/94‑1 (MQ=60)

                                                                 GGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATG                             >  SRR4302542.4075114/1‑94 (MQ=60)

                                                                 GGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATG                             <  SRR4302542.5987590/94‑1 (MQ=60)

                                                                 GGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATG                             <  SRR4302542.6561162/94‑1 (MQ=60)

                                                                  gtttttggtcaacCGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCatccacgaaagt                            <  SRR4302542.5028407/81‑13 (MQ=60)

                                                                   ATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGAT                           <  SRR4302542.1998512/94‑1 (MQ=60)

                                                                   ATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGAT                           <  SRR4302542.2014258/94‑1 (MQ=60)

                                                                   ATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGAT                           <  SRR4302542.4024764/94‑1 (MQ=60)

                                                                   ATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGAT                           >  SRR4302542.3831645/1‑94 (MQ=60)

                                                                     TTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGC                         >  SRR4302542.2338049/1‑94 (MQ=60)

                                                                      TATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCT                        <  SRR4302542.4000438/94‑1 (MQ=60)

                                                                      TATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCT                        <  SRR4302542.5683214/94‑1 (MQ=60)

                                                                      TATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACAAGATGCT                        <  SRR4302542.4589018/94‑1 (MQ=60)

                                                                       ATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTT                       <  SRR4302542.1109038/94‑1 (MQ=60)

                                                                       ATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTT                       >  SRR4302542.970973/1‑94 (MQ=60)

                                                                        TGTCCCACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTC                      >  SRR4302542.4909091/1‑94 (MQ=60)

                                                                        TGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTC                      <  SRR4302542.83513/94‑1 (MQ=60)

                                                                          TCCACCGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAT                    <  SRR4302542.6235336/94‑1 (MQ=60)

                                                                          TCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAT                    <  SRR4302542.4693101/94‑1 (MQ=60)

                                                                          TCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAT                    <  SRR4302542.4326600/94‑1 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   <  SRR4302542.6884518/94‑1 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   >  SRR4302542.2960506/1‑94 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   >  SRR4302542.1046319/1‑94 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   >  SRR4302542.1057313/1‑94 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   <  SRR4302542.2063771/94‑1 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   >  SRR4302542.5756048/1‑94 (MQ=60)

                                                                           CCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATG                   >  SRR4302542.349198/1‑94 (MQ=60)

                                                                            CAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGG                  <  SRR4302542.1582179/94‑1 (MQ=60)

                                                                            CAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGG                  <  SRR4302542.2096341/94‑1 (MQ=60)

                                                                            CAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGG                  >  SRR4302542.4042787/1‑94 (MQ=60)

                                                                             AACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGT                 >  SRR4302542.287373/1‑94 (MQ=60)

                                                                             AACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGT                 >  SRR4302542.2963571/1‑94 (MQ=60)

                                                                             AACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGT                 >  SRR4302542.5886409/1‑94 (MQ=60)

                                                                              ACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTT                <  SRR4302542.6990414/94‑1 (MQ=60)

                                                                                GTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGTTGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTG              >  SRR4302542.5061628/1‑94 (MQ=60)

                                                                                   GCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGA           >  SRR4302542.2143041/1‑94 (MQ=60)

                                                                                   GCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGA           >  SRR4302542.1835389/1‑94 (MQ=60)

                                                                                    CCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAT          >  SRR4302542.1540383/1‑94 (MQ=60)

                                                                                    CCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAT          >  SRR4302542.5501671/1‑94 (MQ=60)

                                                                                     CGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATT         <  SRR4302542.1741365/94‑1 (MQ=60)

                                                                                     CGTATTACCGGGGATTGTATTTGGCTTTTTACTCTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATT         <  SRR4302542.7501771/94‑1 (MQ=60)

                                                                                      GTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTG        <  SRR4302542.7203451/94‑1 (MQ=60)

                                                                                      GTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTG        <  SRR4302542.2726410/94‑1 (MQ=60)

                                                                                        ATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTT      <  SRR4302542.2404768/94‑1 (MQ=60)

                                                                                        ATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTT      >  SRR4302542.3029416/1‑94 (MQ=60)

                                                                                        ATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTT      >  SRR4302542.2542335/1‑94 (MQ=60)

                                                                                          TACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTAC    <  SRR4302542.6826803/94‑1 (MQ=60)

                                                                                          TACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTAC    <  SRR4302542.4447962/94‑1 (MQ=60)

                                                                                           ACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACG   <  SRR4302542.1808549/94‑1 (MQ=60)

                                                                                           ACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACG   <  SRR4302542.2518797/94‑1 (MQ=60)

                                                                                            CCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGA  <  SRR4302542.7252548/94‑1 (MQ=60)

CCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029931‑3030116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`