Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,130,671	T→C	D186G (GAT→GGT)	yghR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,130,671	0	T	C	83.8%	709.1 / 134.3	315	D186G (GAT→GGT)	yghR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (26/25); new base C (144/120); total (170/145)
Fisher's exact test for biased strand distribution p-value = 6.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01

Only 100 of 318 total aligned reads displayed.

TGCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATT  >  NC_000913/3130579‑3130760

   cGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCaa                                                                                        <  2:3585344/93‑1 (MQ=255)

   cGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCaa                                                                                        >  1:1535082/1‑93 (MQ=255)

    gTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTAAATACCAAt                                                                                       >  1:3136827/1‑93 (MQ=255)

     ttATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATg                                                                                      >  2:5317690/1‑93 (MQ=255)

     ttATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATg                                                                                      >  2:4477937/1‑93 (MQ=255)

     ttATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATg                                                                                      <  1:2618977/93‑1 (MQ=255)

       ataGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGcc                                                                                    <  1:5019509/93‑1 (MQ=255)

        taGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGccc                                                                                   <  1:1033742/93‑1 (MQ=255)

        taGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGccc                                                                                   <  1:2809942/93‑1 (MQ=255)

         aGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACTAATGCCCa                                                                                  >  1:4512094/1‑93 (MQ=255)

         aGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCa                                                                                  <  2:7297544/93‑1 (MQ=255)

         aGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCa                                                                                  >  1:866007/1‑93 (MQ=255)

          gCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAg                                                                                 >  1:6124290/1‑93 (MQ=255)

          gCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAg                                                                                 >  1:2972275/1‑93 (MQ=255)

           ccAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAgg                                                                                <  2:3666034/93‑1 (MQ=255)

           ccAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAgg                                                                                >  2:3005373/1‑93 (MQ=255)

            cAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGc                                                                               >  2:7521751/1‑93 (MQ=255)

            cAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGc                                                                               >  2:2740539/1‑93 (MQ=255)

            cAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGc                                                                               >  1:2267742/1‑93 (MQ=255)

             aaTCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCg                                                                              >  2:2831713/1‑93 (MQ=255)

             aaTCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCg                                                                              >  2:2434191/1‑93 (MQ=255)

              aTCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGa                                                                             >  1:6794749/1‑93 (MQ=255)

              aTCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGa                                                                             >  1:3549344/1‑93 (MQ=255)

              aTCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGa                                                                             >  1:1261124/1‑93 (MQ=255)

               tCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGaa                                                                            >  2:3124332/1‑93 (MQ=255)

                 ttCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGaata                                                                          >  2:224724/1‑93 (MQ=255)

                  tCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGaataa                                                                         >  2:405672/1‑93 (MQ=255)

                   cGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGaataat                                                                        <  2:2457422/93‑1 (MQ=255)

                   cGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGaataat                                                                        <  1:6334033/93‑1 (MQ=255)

                    gACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAAtaatt                                                                       <  2:861774/93‑1 (MQ=255)

                      cATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAAtaattaa                                                                     <  1:1168812/93‑1 (MQ=255)

                      cATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAAtaattaa                                                                     >  1:4087653/1‑93 (MQ=255)

                       aTGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAAtaattaat                                                                    <  1:4686539/93‑1 (MQ=255)

                       aTGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAAtaattaat                                                                    <  1:5862385/93‑1 (MQ=255)

                       aTGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAAtaattaat                                                                    <  2:5213166/93‑1 (MQ=255)

                        tGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATaattaatt                                                                   <  2:6658391/93‑1 (MQ=255)

                        tGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATaattaatt                                                                   >  2:3559666/1‑93 (MQ=255)

                         gACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTc                                                                  <  1:5309422/93‑1 (MQ=255)

                         gACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTc                                                                  <  2:6921586/93‑1 (MQ=255)

                         gACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTc                                                                  <  1:3304635/93‑1 (MQ=255)

                          acacCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTcc                                                                 >  2:5610236/1‑93 (MQ=255)

                          acacCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTcc                                                                 >  1:6612250/1‑93 (MQ=255)

                           cacCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCg                                                                >  1:1579144/1‑93 (MQ=255)

                           cacCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCg                                                                <  2:4825562/93‑1 (MQ=255)

                            acCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCgg                                                               >  1:6015550/1‑93 (MQ=255)

                            acCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCgg                                                               >  1:6745072/1‑93 (MQ=255)

                            acCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCgg                                                               <  1:1688876/93‑1 (MQ=255)

                            acCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCgg                                                               >  2:1268374/1‑93 (MQ=255)

                             ccGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCggg                                                              >  2:1037833/1‑93 (MQ=255)

                               gATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCg                                                            >  1:3500529/1‑93 (MQ=255)

                               gATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCg                                                            >  1:4948919/1‑93 (MQ=255)

                                 ttttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGat                                                          <  2:3336047/93‑1 (MQ=255)

                                  tttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGata                                                         <  1:3961540/93‑1 (MQ=255)

                                  tttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCATGCGAATAATTAATTCCGGGCGata                                                         <  2:7362972/93‑1 (MQ=255)

                                  tttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGata                                                         <  2:5969229/93‑1 (MQ=255)

                                  tttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGata                                                         <  2:3755411/93‑1 (MQ=255)

                                   ttGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGatat                                                        <  1:2380127/93‑1 (MQ=255)

                                       ccTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTgcg                                                    >  2:2072933/1‑93 (MQ=255)

                                         tGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGcc                                                  <  1:2501669/93‑1 (MQ=255)

                                         tGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGcc                                                  >  1:3799351/1‑93 (MQ=255)

                                          gCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCa                                                 >  1:2007113/1‑93 (MQ=255)

                                           cAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCAt                                                <  1:5124479/93‑1 (MQ=255)

                                            aGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCAtt                                               >  2:1651586/1‑93 (MQ=255)

                                             gCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCAttt                                              <  1:2129581/93‑1 (MQ=255)

                                              cTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATttg                                             <  1:6419526/93‑1 (MQ=255)

                                               tCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATttgt                                            <  2:4744714/93‑1 (MQ=255)

                                                cGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATttgtt                                           <  2:5148347/93‑1 (MQ=255)

                                                 ggCATCGTCATGGGCAGGCTTGCGGGCGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGGTATTGCGCCATttgttg                                          >  1:5698352/1‑93 (MQ=255)

                                                 ggCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATttgttg                                          <  1:5143595/93‑1 (MQ=255)

                                                 ggCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATttgttg                                          >  2:450508/1‑93 (MQ=255)

                                                  gCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTgg                                         <  2:6372510/93‑1 (MQ=255)

                                                   cATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGt                                        <  1:3653785/93‑1 (MQ=255)

                                                     tAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGtat                                      <  2:352639/93‑1 (MQ=255)

                                                     tAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGtat                                      >  1:807446/1‑93 (MQ=255)

                                                     tAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGtat                                      >  2:4944097/1‑93 (MQ=255)

                                                      aGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGtata                                     <  1:4282440/93‑1 (MQ=255)

                                                       gTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATaa                                    >  2:4163141/1‑93 (MQ=255)

                                                        tCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATaaa                                   <  1:5463716/93‑1 (MQ=255)

                                                        tCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATaaa                                   <  2:5536194/93‑1 (MQ=255)

                                                         cATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAAc                                  <  1:7227385/93‑1 (MQ=255)

                                                               cAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGtt                            <  2:4004906/93‑1 (MQ=255)

                                                                aGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTc                           <  1:4814084/93‑1 (MQ=255)

                                                                aGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTc                           <  2:6268339/93‑1 (MQ=255)

                                                                    ttGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAATCGCCGTTCgcgc                       <  2:1925827/93‑1 (MQ=255)

                                                                    ttGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCgcgc                       >  1:3014846/1‑93 (MQ=255)

                                                                     tGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCt                      <  2:5657967/93‑1 (MQ=255)

                                                                      gCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTg                     <  1:7139443/93‑1 (MQ=255)

                                                                       cGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTgc                    <  2:6020824/93‑1 (MQ=255)

                                                                        gggAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTgcg                   >  2:6229400/1‑93 (MQ=255)

                                                                         ggAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTgcgc                  >  1:6536576/1‑93 (MQ=255)

                                                                           agaTGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCa                <  2:7123639/93‑1 (MQ=255)

                                                                                 cAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACa          <  2:6526488/93‑1 (MQ=255)

                                                                                 cAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACa          >  2:1115019/1‑93 (MQ=255)

                                                                                 cAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACa          <  1:7445197/93‑1 (MQ=255)

                                                                                   gTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATg        >  2:1589320/1‑93 (MQ=255)

                                                                                     ctcAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCt      >  1:4442496/1‑93 (MQ=255)

                                                                                      tcAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTg     >  1:5619794/1‑93 (MQ=255)

                                                                                      tcAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTg     >  2:138183/1‑93 (MQ=255)

                                                                                        aaTACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGAt   >  2:2366109/1‑93 (MQ=255)

                                                                                         atacCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGAtt  <  2:3818712/93‑1 (MQ=255)

TGCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATT  >  NC_000913/3130579‑3130760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATTTT  >  NC_000913/3130579‑3130762

TGCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACC                                                                                            <  SRR4302542.6404838/94‑1 (MQ=60)

 GCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCA                                                                                           <  SRR4302542.8139/94‑1 (MQ=60)

 GCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCA                                                                                           <  SRR4302542.348459/94‑1 (MQ=60)

  CCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAA                                                                                          >  SRR4302542.1548339/1‑94 (MQ=60)

  CCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAA                                                                                          >  SRR4302542.1596032/1‑94 (MQ=60)

   CGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAAT                                                                                         <  SRR4302542.2524845/94‑1 (MQ=60)

   CGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTAAATACCAAT                                                                                         >  SRR4302542.3166643/1‑94 (MQ=60)

    GTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATG                                                                                        >  SRR4302542.2098534/1‑94 (MQ=60)

    GTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATG                                                                                        >  SRR4302542.6162804/1‑94 (MQ=60)

     TTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGC                                                                                       <  SRR4302542.2644286/94‑1 (MQ=60)

     TTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGC                                                                                       >  SRR4302542.3163760/1‑94 (MQ=60)

       ATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCC                                                                                     >  SRR4302542.6463994/1‑94 (MQ=60)

       ATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCC                                                                                     <  SRR4302542.5068253/94‑1 (MQ=60)

        TAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACTAATGCCCA                                                                                    >  SRR4302542.4556311/1‑94 (MQ=60)

        TAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCA                                                                                    <  SRR4302542.1042629/94‑1 (MQ=60)

        TAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCA                                                                                    <  SRR4302542.2836992/94‑1 (MQ=60)

        TAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCA                                                                                    >  SRR4302542.4556310/1‑94 (MQ=60)

        TAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCA                                                                                    >  SRR4302542.873470/1‑94 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTTTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAG                                                                                   >  SRR4302542.5697002/1‑94 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAG                                                                                   <  SRR4302542.7523805/94‑1 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAG                                                                                   <  SRR4302542.5028197/94‑1 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAG                                                                                   >  SRR4302542.6183547/1‑94 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAG                                                                                   >  SRR4302542.301676/1‑94 (MQ=60)

         AGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAG                                                                                   >  SRR4302542.3000742/1‑94 (MQ=60)

          GCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGG                                                                                  <  SRR4302542.4019273/94‑1 (MQ=60)

           CCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGC                                                                                 >  SRR4302542.5457000/1‑94 (MQ=60)

           CCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGC                                                                                 >  SRR4302542.2287255/1‑94 (MQ=60)

            CAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCG                                                                                >  SRR4302542.1097998/1‑94 (MQ=60)

            CAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCG                                                                                >  SRR4302542.5150600/1‑94 (MQ=60)

            CAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCG                                                                                >  SRR4302542.5522472/1‑94 (MQ=60)

            CAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCG                                                                                >  SRR4302542.1488454/1‑94 (MQ=60)

             AATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGA                                                                               >  SRR4302542.6861560/1‑94 (MQ=60)

             AATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGA                                                                               >  SRR4302542.3582526/1‑94 (MQ=60)

             AATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGA                                                                               >  SRR4302542.1271969/1‑94 (MQ=60)

              ATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAA                                                                              >  SRR4302542.3380460/1‑94 (MQ=60)

              ATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAA                                                                              >  SRR4302542.3174110/1‑94 (MQ=60)

              ATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAA                                                                              >  SRR4302542.6442943/1‑94 (MQ=60)

                CTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATA                                                                            >  SRR4302542.2259216/1‑94 (MQ=60)

                 TTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAA                                                                           >  SRR4302542.5334735/1‑94 (MQ=60)

                 TTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAA                                                                           <  SRR4302542.1562848/94‑1 (MQ=60)

                  TCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAAT                                                                          <  SRR4302542.81773/94‑1 (MQ=60)

                   CGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATT                                                                         <  SRR4302542.6396442/94‑1 (MQ=60)

                    GACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTA                                                                        >  SRR4302542.2380077/1‑94 (MQ=60)

                    GACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTA                                                                        >  SRR4302542.3599879/1‑94 (MQ=60)

                     ACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAA                                                                       >  SRR4302542.4127976/1‑94 (MQ=60)

                      CATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAAT                                                                      <  SRR4302542.1178908/94‑1 (MQ=60)

                      CATAACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTATCAATACCAATGCCCAGGCGAATAATTAAT                                                                      >  SRR4302542.1919446/1‑94 (MQ=60)

                       ATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATT                                                                     <  SRR4302542.4732311/94‑1 (MQ=60)

                       ATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATT                                                                     <  SRR4302542.5919230/94‑1 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCC                                                                   <  SRR4302542.7296431/94‑1 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   <  SRR4302542.5361007/94‑1 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   >  SRR4302542.5191450/1‑94 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   <  SRR4302542.3335801/94‑1 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   >  SRR4302542.327972/1‑94 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   <  SRR4302542.1974533/94‑1 (MQ=60)

                         GACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCC                                                                   >  SRR4302542.6677391/1‑94 (MQ=60)

                          ACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCG                                                                  >  SRR4302542.1592784/1‑94 (MQ=60)

                           CACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGG                                                                 >  SRR4302542.6811446/1‑94 (MQ=60)

                           CACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGG                                                                 >  SRR4302542.6073801/1‑94 (MQ=60)

                           CACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGG                                                                 >  SRR4302542.3875858/1‑94 (MQ=60)

                           CACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGG                                                                 <  SRR4302542.3130563/94‑1 (MQ=60)

                           CACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGG                                                                 >  SRR4302542.665434/1‑94 (MQ=60)

                            ACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGG                                                                >  SRR4302542.4941147/1‑94 (MQ=60)

                            ACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGG                                                                <  SRR4302542.1703499/94‑1 (MQ=60)

                            ACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGG                                                                <  SRR4302542.7466811/94‑1 (MQ=60)

                            ACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGG                                                                <  SRR4302542.3503220/94‑1 (MQ=60)

                             CCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGC                                                               <  SRR4302542.2574984/94‑1 (MQ=60)

                             CCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGC                                                               <  SRR4302542.4282680/94‑1 (MQ=60)

                              CGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCG                                                              >  SRR4302542.3533266/1‑94 (MQ=60)

                              CGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCG                                                              >  SRR4302542.4997002/1‑94 (MQ=60)

                              CGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCG                                                              >  SRR4302542.4574890/1‑94 (MQ=60)

                              CGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCG                                                              <  SRR4302542.2204248/94‑1 (MQ=60)

                               GATTTTGTCCTGCAGCTCTGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGA                                                             >  SRR4302542.3350230/1‑94 (MQ=60)

                               GATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGA                                                             >  SRR4302542.3567248/1‑94 (MQ=60)

                                ATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGAT                                                            >  SRR4302542.2631986/1‑94 (MQ=60)

                                 TTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATA                                                           <  SRR4302542.3772993/94‑1 (MQ=60)

                                  TTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATAT                                                          <  SRR4302542.4000657/94‑1 (MQ=60)

                                   TTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATT                                                         <  SRR4302542.2401760/94‑1 (MQ=60)

                                    TGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGGGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTG                                                        >  SRR4302542.2896471/1‑94 (MQ=60)

                                    TGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTG                                                        >  SRR4302542.632095/1‑94 (MQ=60)

                                    TGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTG                                                        <  SRR4302542.4626962/94‑1 (MQ=60)

                                    TGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTG                                                        <  SRR4302542.6294743/94‑1 (MQ=60)

                                     GTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGC                                                       <  SRR4302542.1864437/94‑1 (MQ=60)

                                     GTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGC                                                       >  SRR4302542.5597987/1‑94 (MQ=60)

                                      TCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCG                                                      >  SRR4302542.6221525/1‑94 (MQ=60)

                                       CCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGC                                                     >  SRR4302542.6161891/1‑94 (MQ=60)

                                       CCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGC                                                     >  SRR4302542.3685002/1‑94 (MQ=60)

                                       CCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGC                                                     >  SRR4302542.6817821/1‑94 (MQ=60)

                                        CTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCC                                                    >  SRR4302542.3836960/1‑94 (MQ=60)

                                        CTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCC                                                    <  SRR4302542.121323/94‑1 (MQ=60)

                                        CTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCC                                                    >  SRR4302542.1161418/1‑94 (MQ=60)

                                         TGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCA                                                   <  SRR4302542.2525923/94‑1 (MQ=60)

                                         TGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCA                                                   >  SRR4302542.2024450/1‑94 (MQ=60)

                                         TGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCA                                                   >  SRR4302542.1586049/1‑94 (MQ=60)

                                           CAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATT                                                 <  SRR4302542.5174239/94‑1 (MQ=60)

                                           CAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATT                                                 <  SRR4302542.3572452/94‑1 (MQ=60)

                                            AGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTT                                                >  SRR4302542.4987992/1‑94 (MQ=60)

                                            AGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTT                                                >  SRR4302542.595891/1‑94 (MQ=60)

                                            AGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTT                                                >  SRR4302542.5835289/1‑94 (MQ=60)

                                             GCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTG                                               <  SRR4302542.2147958/94‑1 (MQ=60)

                                              CTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGT                                              <  SRR4302542.6482793/94‑1 (MQ=60)

                                                CGGCATCGTCATGGGCAGGCTTGCGGGCGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGGTATTGCGCCATTTGTTG                                            >  SRR4302542.5753661/1‑94 (MQ=60)

                                                CGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTG                                            >  SRR4302542.482952/1‑94 (MQ=60)

                                                CGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCCCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTG                                            <  SRR4302542.4435797/94‑1 (MQ=60)

                                                 GGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGG                                           <  SRR4302542.5193593/94‑1 (MQ=60)

                                                 GGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGG                                           >  SRR4302542.865354/1‑94 (MQ=60)

                                                   CATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTA                                         <  SRR4302542.2125420/94‑1 (MQ=60)

                                                   CATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTA                                         >  SRR4302542.7381409/1‑94 (MQ=60)

                                                   CATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTA                                         <  SRR4302542.3687979/94‑1 (MQ=60)

                                                    ATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTAT                                        >  SRR4302542.1258521/1‑94 (MQ=60)

                                                    ATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTAT                                        >  SRR4302542.814395/1‑94 (MQ=60)

                                                    ATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTAT                                        >  SRR4302542.2673020/1‑94 (MQ=60)

                                                      AGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAA                                      <  SRR4302542.4324564/94‑1 (MQ=60)

                                                      AGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGAGATTGCGCCATTTGTTTGTATAA                                      >  SRR4302542.682379/1‑94 (MQ=60)

                                                       NNCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAA                                     <  SRR4302542.1440243/94‑1 (MQ=60)

                                                       GTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAA                                     <  SRR4302542.6586355/94‑1 (MQ=60)

                                                        TCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAAC                                    <  SRR4302542.5516794/94‑1 (MQ=60)

                                                        TCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAAC                                    <  SRR4302542.3013677/94‑1 (MQ=60)

                                                        TCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAAC                                    <  SRR4302542.7126433/94‑1 (MQ=60)

                                                        TCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAAC                                    <  SRR4302542.391832/94‑1 (MQ=60)

                                                         CATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACG                                   <  SRR4302542.7298284/94‑1 (MQ=60)

                                                          ATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGC                                  >  SRR4302542.2738175/1‑94 (MQ=60)

                                                          ATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGC                                  <  SRR4302542.1671716/94‑1 (MQ=60)

                                                          ATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCAGGCGATATTGCGCCATTTGTTGGTATAAACGC                                  >  SRR4302542.4543240/1‑94 (MQ=60)

                                                            GGTCAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCG                                <  SRR4302542.2332846/94‑1 (MQ=60)

                                                               CAGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTC                             >  SRR4302542.380357/1‑94 (MQ=60)

                                                                AGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCG                            <  SRR4302542.4861004/94‑1 (MQ=60)

                                                                AGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCG                            <  SRR4302542.5187809/94‑1 (MQ=60)

                                                                AGGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCG                            >  SRR4302542.6545059/1‑94 (MQ=60)

                                                                 GGCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGC                           >  SRR4302542.6659702/1‑94 (MQ=60)

                                                                  GCTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCG                          >  SRR4302542.5005168/1‑94 (MQ=60)

                                                                   CTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGC                         >  SRR4302542.3043661/1‑94 (MQ=60)

                                                                   CTTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGC                         >  SRR4302542.7265137/1‑94 (MQ=60)

                                                                    TTGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCT                        <  SRR4302542.674586/94‑1 (MQ=60)

                                                                     TGCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTG                       <  SRR4302542.6776536/94‑1 (MQ=60)

                                                                      GCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGC                      <  SRR4302542.5838788/94‑1 (MQ=60)

                                                                      GCGGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGC                      <  SRR4302542.7209511/94‑1 (MQ=60)

                                                                        GGGGGATGGCAGTCTCAATACCAATGGCCAGGGGAATAGTTAATTCCGGGCGATATTGCGCCATTTGTTGGTttagaggtcgttcgggcggcgc                    >  SRR4302542.2412227/1‑72 (MQ=60)

                                                                        GGGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGC                    >  SRR4302542.6600995/1‑94 (MQ=60)

                                                                         GGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCC                   >  SRR4302542.5418999/1‑94 (MQ=60)

                                                                         GGAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCC                   <  SRR4302542.4843225/94‑1 (MQ=60)

                                                                          GAGATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCA                  <  SRR4302542.5693230/94‑1 (MQ=60)

                                                                             ATGGCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAA               >  SRR4302542.4925773/1‑94 (MQ=60)

                                                                                GCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACA            <  SRR4302542.6889994/94‑1 (MQ=60)

                                                                                GCAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACA            <  SRR4302542.557162/94‑1 (MQ=60)

                                                                                 CAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACAT           <  SRR4302542.42324/94‑1 (MQ=60)

                                                                                 CAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACAT           <  SRR4302542.4450559/94‑1 (MQ=60)

                                                                                 CAGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACAT           <  SRR4302542.7518091/94‑1 (MQ=60)

                                                                                  AGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATG          >  SRR4302542.2873935/1‑94 (MQ=60)

                                                                                  AGTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATG          >  SRR4302542.5124134/1‑94 (MQ=60)

                                                                                   GTCTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGC         >  SRR4302542.421233/1‑94 (MQ=60)

                                                                                    TCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCT        <  SRR4302542.919563/94‑1 (MQ=60)

                                                                                    TCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCT        >  SRR4302542.4486089/1‑94 (MQ=60)

                                                                                     CTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.5674386/1‑94 (MQ=60)

                                                                                     CTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.6958573/1‑94 (MQ=60)

                                                                                     CTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.2833632/1‑94 (MQ=60)

                                                                                     CTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.76507/1‑94 (MQ=60)

                                                                                     CTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.5298745/1‑94 (MQ=60)

                                                                                     CTCAATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTG       >  SRR4302542.406339/1‑94 (MQ=60)

                                                                                        AATACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATT    >  SRR4302542.6035755/1‑94 (MQ=60)

                                                                                          TACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATTTT  >  SRR4302542.3381618/1‑94 (MQ=60)

                                                                                          TACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATTTT  >  SRR4302542.5264631/1‑94 (MQ=60)

                                                                                          TACCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATTTT  <  SRR4302542.1708942/94‑1 (MQ=60)

TGCCGTTATAGCCAATCTTCGACATGACACCGATTTTGTCCTGCAGCTCGGCATAGTCATGGTCAGGCTTGCGGGAGATGGCAGTCTCAATATCAATGCCCAGGCGAATAATTAATTCCGGGCGATATTGCGCCATTTGTTGGTATAAACGCCGTTCGCGCTGCGCCAGAAACATGCTGATTTT  >  NC_000913/3130579‑3130762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`