Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,132,550	T→C	G135G (GGT→GGC)	yghT →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,132,550	0	T	C	82.2%	640.7 / 130.7	326	G135G (GGT→GGC)	yghT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (32/25); new base C (143/121); total (176/150)
Fisher's exact test for biased strand distribution p-value = 8.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.68e-01

Only 100 of 334 total aligned reads displayed.

GTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAA  >  NC_000913/3132459‑3132639

gtcgCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑ggtg                                                                                          <  1:2667484/93‑1 (MQ=255)

 tcgCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑ggtgg                                                                                         >  1:2216265/1‑93 (MQ=255)

 tcgCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑ggcgg                                                                                         >  2:3584234/1‑93 (MQ=255)

 tcgCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑ggcgg                                                                                         >  2:5931020/1‑93 (MQ=255)

     gggTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCgc                                                                                     >  2:2990055/1‑92 (MQ=255)

     gggTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCgc                                                                                     >  2:6195600/1‑92 (MQ=255)

     gggTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCgc                                                                                     >  1:4164844/1‑92 (MQ=255)

         tAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTTGTTTTg                                                                                 <  2:6993197/93‑1 (MQ=255)

         tAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTg                                                                                 <  2:6056386/93‑1 (MQ=255)

         tAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTg                                                                                 >  2:1123193/1‑93 (MQ=255)

           aTTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGtc                                                                               <  2:2273202/93‑1 (MQ=255)

           aTTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGCGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGtc                                                                               >  1:4260485/1‑93 (MQ=255)

              gTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCa                                                                            <  1:7312725/93‑1 (MQ=255)

              gTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCa                                                                            <  2:1354875/93‑1 (MQ=255)

              gTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCa                                                                            <  2:1266412/93‑1 (MQ=255)

               ttCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCAt                                                                           >  1:6986016/1‑93 (MQ=255)

                 cTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCAtgg                                                                         >  2:5816222/1‑93 (MQ=255)

                     ccgaccgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCAtggctgg                                                                     <  1:803569/93‑1 (MQ=255)

                     ccgaccgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCAtggctgg                                                                     <  1:4614667/93‑1 (MQ=255)

                        accgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCaa                                                                  >  1:251860/1‑93 (MQ=255)

                          cgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGc                                                                >  2:2135403/1‑93 (MQ=255)

                           gTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGcc                                                               >  1:3885669/1‑93 (MQ=255)

                           gTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGcc                                                               <  2:4047192/93‑1 (MQ=255)

                           gTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGcc                                                               >  1:5208885/1‑93 (MQ=255)

                           gTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGcc                                                               <  2:2780053/93‑1 (MQ=255)

                            ttATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCa                                                              >  2:3169806/1‑93 (MQ=255)

                            ttATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCa                                                              <  2:7128778/93‑1 (MQ=255)

                             tATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAg                                                             >  2:2400696/1‑93 (MQ=255)

                               tCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGa                                                           >  2:2544420/1‑93 (MQ=255)

                                ccTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGaa                                                          <  2:4608525/93‑1 (MQ=255)

                                 cTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAAc                                                         <  1:1945658/93‑1 (MQ=255)

                                 cTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGGGTTCCCACCTAACGTTGAA‑GGCGGTAGCTTTGTCTCATGGCTGGCAAGCCAGGAAc                                                         >  1:5540920/1‑93 (MQ=255)

                                  tCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACg                                                        >  2:5730048/1‑93 (MQ=255)

                                  tCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACg                                                        >  2:6534219/1‑93 (MQ=255)

                                    aGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGGAAGTa                                                      >  1:320701/1‑93 (MQ=255)

                                    aGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTa                                                      <  2:220982/93‑1 (MQ=255)

                                    aGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTa                                                      <  2:3281487/93‑1 (MQ=255)

                                     ggACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTaa                                                     <  1:5289446/93‑1 (MQ=255)

                                     ggACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTaa                                                     <  1:198572/93‑1 (MQ=255)

                                     ggACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTaa                                                     <  2:1988378/93‑1 (MQ=255)

                                     ggACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTaa                                                     >  1:1618116/1‑93 (MQ=255)

                                      gACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTaaa                                                    <  1:840545/93‑1 (MQ=255)

                                       aCCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAg                                                   >  1:4385897/1‑93 (MQ=255)

                                       aCCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAg                                                   >  2:3896906/1‑93 (MQ=255)

                                        ccAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGc                                                  >  1:1309479/1‑93 (MQ=255)

                                         cAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCg                                                 >  1:2881594/1‑93 (MQ=255)

                                         cAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCg                                                 >  2:2946137/1‑93 (MQ=255)

                                          aaaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                >  1:6563520/1‑93 (MQ=255)

                                          aaaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                >  2:2639909/1‑93 (MQ=255)

                                          aaaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                >  1:5520773/1‑93 (MQ=255)

                                          aaaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                >  2:2746735/1‑93 (MQ=255)

                                          aaaTTCCTGGCGCTTACGATGGTACGGTGTCCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                <  1:3375237/93‑1 (MQ=255)

                                           aaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGtt                                               >  2:1758524/1‑93 (MQ=255)

                                           aaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGtt                                               >  2:7464029/1‑93 (MQ=255)

                                           aaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGtt                                               >  2:1815831/1‑93 (MQ=255)

                                           aaTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGAAAGCCAGGAACGTAAAGCGtt                                               >  1:6479184/1‑93 (MQ=255)

                                            aTTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGttt                                              <  1:6957333/93‑1 (MQ=255)

                                             ttCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTc                                             <  2:5062945/93‑1 (MQ=255)

                                             ttCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTc                                             >  2:425164/1‑93 (MQ=255)

                                             ttCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTc                                             <  2:4296825/93‑1 (MQ=255)

                                              tCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCa                                            <  2:5204771/93‑1 (MQ=255)

                                              tCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCa                                            <  1:1867473/93‑1 (MQ=255)

                                              tCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCa                                            <  2:647239/93‑1 (MQ=255)

                                               ccTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCAc                                           <  1:612132/93‑1 (MQ=255)

                                               ccTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCAc                                           <  1:4801519/93‑1 (MQ=255)

                                               ccTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCAc                                           <  1:4210461/93‑1 (MQ=255)

                                                cTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACt                                          <  1:4736126/93‑1 (MQ=255)

                                                cTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACt                                          >  1:4438897/1‑93 (MQ=255)

                                                cTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACt                                          <  1:7495925/93‑1 (MQ=255)

                                                 tGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTg                                         >  2:6391506/1‑93 (MQ=255)

                                                  ggCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTgg                                        >  2:6878953/1‑93 (MQ=255)

                                                  ggCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTgg                                        <  1:7204910/93‑1 (MQ=255)

                                                   gcgcTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGa                                       <  2:3325840/93‑1 (MQ=255)

                                                     gcTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATg                                     <  1:5048200/93‑1 (MQ=255)

                                                           gATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGc                               >  2:5303263/1‑93 (MQ=255)

                                                           gATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGc                               >  1:1198285/1‑93 (MQ=255)

                                                           gATGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGc                               >  1:4586531/1‑93 (MQ=255)

                                                            aTGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGcc                              >  2:6671715/1‑93 (MQ=255)

                                                            aTGGTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGcc                              <  1:5233771/93‑1 (MQ=255)

                                                               gTACGGTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATa                           <  2:4954845/93‑1 (MQ=255)

                                                                   ggTGTTCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGcc                       <  2:4808830/93‑1 (MQ=255)

                                                                   ggTGTCCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGcc                       <  1:3997713/93‑1 (MQ=255)

                                                                       ttCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGAt                   <  2:4194148/93‑1 (MQ=255)

                                                                        tCCCACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATc                  >  2:5592556/1‑93 (MQ=255)

                                                                          ccACCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTg                >  2:778142/1‑93 (MQ=255)

                                                                           ccccTAACGTTGAG‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTgg               <  1:5897480/91‑1 (MQ=255)

                                                                            aCCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGGGAGCCATAAGCCCGATCTGGt              >  1:3633043/1‑93 (MQ=255)

                                                                            aCCTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGt              <  2:7164904/93‑1 (MQ=255)

                                                                             ccTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtc             >  1:6336163/1‑93 (MQ=255)

                                                                              cTAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtca            >  1:4705290/1‑93 (MQ=255)

                                                                               tAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcat           >  1:6181850/1‑93 (MQ=255)

                                                                               tAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcat           <  2:1482422/93‑1 (MQ=255)

                                                                               tAACGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcat           >  2:3520904/1‑93 (MQ=255)

                                                                               ctaCGTTGAAGGGGGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtca            <  1:2350987/91‑1 (MQ=255)

                                                                                aaCGTTGAA‑GGCGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCTTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcatc          <  1:5599555/93‑1 (MQ=255)

                                                                                 aCGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcatca         >  2:7287281/1‑93 (MQ=255)

                                                                                 aCGTTGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcatca         >  1:1022906/1‑93 (MQ=255)

                                                                                    ttGAA‑GGCGTCCGCTTTGTCTCAGGGCTGGCAAGCCAGGAACAAAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAAc      <  1:6722029/93‑1 (MQ=255)

                                                                                    ttGAA‑GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAAc      >  1:3757371/1‑93 (MQ=255)

                                                                                        a‑GGCGGTCGCTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCaa  <  1:1459700/93‑1 (MQ=255)

GTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAA‑GGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAA  >  NC_000913/3132459‑3132639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTT  >  NC_000913/3132457‑3132643

TCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGC                                                                                               >  SRR4302542.5994520/1‑94 (MQ=60)

 CGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCG                                                                                              <  SRR4302542.257434/94‑1 (MQ=60)

 CGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCG                                                                                              <  SRR4302542.4989476/94‑1 (MQ=60)

  GTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGG                                                                                             >  SRR4302542.2235337/1‑94 (MQ=60)

  GTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGG                                                                                             <  SRR4302542.2693230/94‑1 (MQ=60)

  GTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGG                                                                                             <  SRR4302542.2648791/94‑1 (MQ=60)

    CGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTC                                                                                           >  SRR4302542.1902675/1‑94 (MQ=60)

     GCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCG                                                                                          <  SRR4302542.3842096/94‑1 (MQ=60)

      CGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGT                                                                                         >  SRR4302542.5847372/1‑94 (MQ=60)

      CGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGC                                                                                         >  SRR4302542.7053977/1‑94 (MQ=60)

      CGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGC                                                                                         >  SRR4302542.4205912/1‑94 (MQ=60)

       GGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCT                                                                                        >  SRR4302542.1969565/1‑94 (MQ=60)

       GGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCT                                                                                        <  SRR4302542.3721873/94‑1 (MQ=60)

        GGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTT                                                                                       >  SRR4302542.1928215/1‑94 (MQ=60)

         GTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTT                                                                                      >  SRR4302542.1443031/1‑94 (MQ=60)

          TTAATTGTTCTACCCGCCCGTTATCCTCAGGACCAAATTCCGGGCGCTTACGATGGTCCGGTTTTCCCCCCTAACGTTGAAGGCGGTCGCTTTG                                                                                     <  SRR4302542.2399721/94‑1 (MQ=60)

          TTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCNNCTAACGTTGNNGGCGGTCGNNNTG                                                                                     <  SRR4302542.6374676/94‑1 (MQ=60)

          TTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTG                                                                                     <  SRR4302542.3257356/94‑1 (MQ=60)

          TTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTG                                                                                     >  SRR4302542.4223623/1‑94 (MQ=60)

            AATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTC                                                                                   >  SRR4302542.4631628/1‑94 (MQ=60)

            AATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTC                                                                                   >  SRR4302542.5907042/1‑94 (MQ=60)

            AATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGCGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTC                                                                                   >  SRR4302542.4302436/1‑94 (MQ=60)

                GTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCAT                                                                               <  SRR4302542.4771248/94‑1 (MQ=60)

                GTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCAT                                                                               <  SRR4302542.7384352/94‑1 (MQ=60)

                GTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCAT                                                                               >  SRR4302542.7054638/1‑94 (MQ=60)

                GTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCGT                                                                               <  SRR4302542.820142/94‑1 (MQ=60)

                 TTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATG                                                                              >  SRR4302542.4215154/1‑94 (MQ=60)

                 TTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATG                                                                              <  SRR4302542.6349343/94‑1 (MQ=60)

                 TTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATG                                                                              <  SRR4302542.4771076/94‑1 (MQ=60)

                  TCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGG                                                                             >  SRR4302542.5500151/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGTACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGC                                                                            >  SRR4302542.2330186/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTTCGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGC                                                                            >  SRR4302542.7588512/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGC                                                                            >  SRR4302542.4725777/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGC                                                                            >  SRR4302542.787855/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGC                                                                            >  SRR4302542.2435851/1‑94 (MQ=60)

                   CTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGC                                                                            >  SRR4302542.4472843/1‑94 (MQ=60)

                    TAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCT                                                                           <  SRR4302542.5060652/94‑1 (MQ=60)

                     AACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTG                                                                          >  SRR4302542.3947909/1‑94 (MQ=60)

                     AACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTG                                                                          >  SRR4302542.5116672/1‑94 (MQ=60)

                      ACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGG                                                                         >  SRR4302542.5648823/1‑94 (MQ=60)

                       CCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGC                                                                        >  SRR4302542.4569209/1‑94 (MQ=60)

                       CCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGC                                                                        <  SRR4302542.4659753/94‑1 (MQ=60)

                       CCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGC                                                                        >  SRR4302542.7068862/1‑94 (MQ=60)

                       CCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGC                                                                        <  SRR4302542.810481/94‑1 (MQ=60)

                         GACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAA                                                                      >  SRR4302542.254012/1‑94 (MQ=60)

                           CCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGC                                                                    >  SRR4302542.4526019/1‑94 (MQ=60)

                           CCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGC                                                                    >  SRR4302542.561386/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCC                                                                   >  SRR4302542.3924035/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCC                                                                   >  SRR4302542.4102905/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAGGCC                                                                   >  SRR4302542.3926433/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCC                                                                   >  SRR4302542.630667/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCC                                                                   >  SRR4302542.5259546/1‑94 (MQ=60)

                            CGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCC                                                                   <  SRR4302542.6765271/94‑1 (MQ=60)

                             GTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCA                                                                  >  SRR4302542.7535281/1‑94 (MQ=60)

                             GTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCA                                                                  >  SRR4302542.1291175/1‑94 (MQ=60)

                              TTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAG                                                                 >  SRR4302542.4437614/1‑94 (MQ=60)

                               TATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGG                                                                >  SRR4302542.7053983/1‑94 (MQ=60)

                                ATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGA                                                               >  SRR4302542.81350/1‑94 (MQ=60)

                                  CCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAAC                                                             <  SRR4302542.3269378/94‑1 (MQ=60)

                                  CCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAAC                                                             >  SRR4302542.5582226/1‑94 (MQ=60)

                                  CCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGGGTTCCCACCTAACGTTGAAGGCGGTAGCTTTGTCTCATGGCTGGCAAGCCAGGAAC                                                             >  SRR4302542.5594777/1‑94 (MQ=60)

                                   CTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACG                                                            <  SRR4302542.1962487/94‑1 (MQ=60)

                                   CTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACG                                                            >  SRR4302542.92567/1‑94 (MQ=60)

                                   CTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACG                                                            >  SRR4302542.7006336/1‑94 (MQ=60)

                                   CTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACG                                                            >  SRR4302542.1411453/1‑94 (MQ=60)

                                   CTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACG                                                            >  SRR4302542.2923285/1‑94 (MQ=60)

                                    TCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCATCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGT                                                           <  SRR4302542.7375853/94‑1 (MQ=60)

                                    TCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGT                                                           >  SRR4302542.5231665/1‑94 (MQ=60)

                                     CAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGGAAGTA                                                          >  SRR4302542.323481/1‑94 (MQ=60)

                                     CAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTA                                                          >  SRR4302542.4814213/1‑94 (MQ=60)

                                      AGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAA                                                         >  SRR4302542.6288293/1‑94 (MQ=60)

                                      AGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAA                                                         >  SRR4302542.1632093/1‑94 (MQ=60)

                                      AGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAA                                                         >  SRR4302542.6647626/1‑94 (MQ=60)

                                       GGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAA                                                        <  SRR4302542.200259/94‑1 (MQ=60)

                                       GGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAA                                                        <  SRR4302542.5340861/94‑1 (MQ=60)

                                        GACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAG                                                       <  SRR4302542.847807/94‑1 (MQ=60)

                                        GACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAG                                                       <  SRR4302542.2772211/94‑1 (MQ=60)

                                        GACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAG                                                       >  SRR4302542.4428932/1‑94 (MQ=60)

                                         ACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGC                                                      >  SRR4302542.1853811/1‑94 (MQ=60)

                                         ACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGC                                                      >  SRR4302542.4923410/1‑94 (MQ=60)

                                         ACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGC                                                      >  SRR4302542.1320764/1‑94 (MQ=60)

                                          CCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCG                                                     <  SRR4302542.2202704/94‑1 (MQ=60)

                                          CCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCG                                                     >  SRR4302542.2909273/1‑94 (MQ=60)

                                          CCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCG                                                     <  SRR4302542.4753639/94‑1 (MQ=60)

                                          CCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCG                                                     >  SRR4302542.5172988/1‑94 (MQ=60)

                                           CAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGT                                                    >  SRR4302542.6628205/1‑94 (MQ=60)

                                           CAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGT                                                    >  SRR4302542.5574424/1‑94 (MQ=60)

                                            AAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTT                                                   <  SRR4302542.1388306/94‑1 (MQ=60)

                                            AAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGAAAGCCAGGAACGTAAAGCGTT                                                   >  SRR4302542.6543016/1‑94 (MQ=60)

                                            AAATTCCTGGCGCTTACGATGGTACGGTGTCCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTT                                                   <  SRR4302542.3406949/94‑1 (MQ=60)

                                             AATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTT                                                  <  SRR4302542.5275256/94‑1 (MQ=60)

                                              ATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTC                                                 <  SRR4302542.7025688/94‑1 (MQ=60)

                                               TTCCTGGCGCTTACGATGGTCGGGTGTCCCACCCAAACGTTGAAGGCGGTCCCTTTGTCTAATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCA                                                <  SRR4302542.6216817/94‑1 (MQ=42)

                                               TTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCA                                                <  SRR4302542.6216818/94‑1 (MQ=60)

                                               TTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCA                                                >  SRR4302542.791708/1‑94 (MQ=60)

                                               TTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCA                                                >  SRR4302542.3753145/1‑94 (MQ=60)

                                                TCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCAC                                               <  SRR4302542.1883627/94‑1 (MQ=60)

                                                 CCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACT                                              <  SRR4302542.617400/94‑1 (MQ=60)

                                                 CCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACT                                              <  SRR4302542.4251959/94‑1 (MQ=60)

                                                 CCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACT                                              <  SRR4302542.4304651/94‑1 (MQ=60)

                                                 CCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACT                                              >  SRR4302542.4482461/1‑94 (MQ=60)

                                                 CCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACT                                              <  SRR4302542.4848294/94‑1 (MQ=60)

                                                  CTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTG                                             <  SRR4302542.1663173/94‑1 (MQ=60)

                                                  CTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTG                                             <  SRR4302542.4782310/94‑1 (MQ=60)

                                                  CTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTG                                             <  SRR4302542.747993/94‑1 (MQ=60)

                                                  CTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTG                                             <  SRR4302542.7569558/94‑1 (MQ=60)

                                                  CTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTG                                             >  SRR4302542.2333042/1‑94 (MQ=60)

                                                    GGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGA                                           <  SRR4302542.7275620/94‑1 (MQ=60)

                                                     GCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTGGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGAT                                          <  SRR4302542.6547782/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.2333686/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.5309456/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.5319091/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.2234151/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.4736812/94‑1 (MQ=60)

                                                      CGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATG                                         <  SRR4302542.3076264/94‑1 (MQ=60)

                                                       GCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGG                                        <  SRR4302542.5097208/94‑1 (MQ=60)

                                                        CTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGG                                       >  SRR4302542.2886142/1‑94 (MQ=60)

                                                        CTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGC                                       >  SRR4302542.6151139/1‑94 (MQ=60)

                                                        CTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGC                                       >  SRR4302542.1947722/1‑94 (MQ=60)

                                                         TTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCG                                      >  SRR4302542.6449701/1‑94 (MQ=60)

                                                         TTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCG                                      <  SRR4302542.3644943/94‑1 (MQ=60)

                                                         TTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCG                                      <  SRR4302542.1554290/94‑1 (MQ=60)

                                                          TACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGA                                     <  SRR4302542.6419561/94‑1 (MQ=60)

                                                           ACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAG                                    <  SRR4302542.7314773/94‑1 (MQ=60)

                                                           ACGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAG                                    <  SRR4302542.672612/94‑1 (MQ=60)

                                                            CGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGC                                   >  SRR4302542.4631399/1‑94 (MQ=60)

                                                            CGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGC                                   >  SRR4302542.4631400/1‑94 (MQ=60)

                                                            CGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGC                                   >  SRR4302542.7125210/1‑94 (MQ=60)

                                                            CGATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGC                                   >  SRR4302542.1208600/1‑94 (MQ=60)

                                                              ATGGTACGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCA                                 <  SRR4302542.5284660/94‑1 (MQ=60)

                                                                ggtcgggtgtcccccCCTAACGTTGAAGGCGGTCGTTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATA                               <  SRR4302542.2503028/79‑1 (MQ=60)

                                                                 GTACGGTGTCCCCCCCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAA                              <  SRR4302542.7156332/94‑1 (MQ=60)

                                                                    CGGTGTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCC                           >  SRR4302542.6936079/1‑94 (MQ=60)

                                                                     GGTGTCCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCT                          <  SRR4302542.4037147/94‑1 (MQ=60)

                                                                        GTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGAT                       >  SRR4302542.854097/1‑94 (MQ=60)

                                                                        GTTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGAT                       >  SRR4302542.6563346/1‑94 (MQ=60)

                                                                         TTCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATC                      >  SRR4302542.4623223/1‑94 (MQ=60)

                                                                         TCCCCACCAACCGTTGAAGGCGGTCGCTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATC                      <  SRR4302542.2001063/94‑1 (MQ=60)

                                                                          TCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCT                     <  SRR4302542.1120959/94‑1 (MQ=60)

                                                                          TCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCT                     >  SRR4302542.4136239/1‑94 (MQ=60)

                                                                          TCCCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAACCATAAGCCTGATCT                     >  SRR4302542.596467/1‑94 (MQ=60)

                                                                          CCCCACCTAATGTGGAAGGCGGTCTCTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCT                     <  SRR4302542.5384267/94‑1 (MQ=60)

                                                                            CCCCCAAACGTTGAAGGCGGTCGCTTTGTCTCAGGGCTGGCAAGCCAGGAACGTAAAGCTTTTCAATGGATGGCGAGCCATAAGCCTGATCTGG                   <  SRR4302542.3153873/94‑1 (MQ=60)

                                                                            CCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGG                   >  SRR4302542.4842103/1‑94 (MQ=60)

                                                                            CCACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGG                   >  SRR4302542.1098887/1‑94 (MQ=60)

                                                                             CCCCTAACGTTGAGGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGT                  <  SRR4302542.5954658/94‑1 (MQ=60)

                                                                             CACTTAACGTTGAAGGCGGTGGCTTTGTCTCATGGCGGGAAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGT                  <  SRR4302542.1489491/94‑1 (MQ=60)

                                                                             CACCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGGGAGCCATAAGCCCGATCTGGT                  >  SRR4302542.3666896/1‑94 (MQ=60)

                                                                              CCCTACCGTTGAGGGTGGTCGTTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTC                 <  SRR4302542.2664055/94‑1 (MQ=60)

                                                                              ACCTAAGGTTGAAGGTGGTTTTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTC                 <  SRR4302542.4311896/94‑1 (MQ=60)

                                                                              ACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTC                 >  SRR4302542.6398586/1‑94 (MQ=60)

                                                                               CCTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCA                >  SRR4302542.4751196/1‑94 (MQ=60)

                                                                               CCAAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGAAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCA                <  SRR4302542.3911651/94‑1 (MQ=60)

                                                                                CTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCAT               >  SRR4302542.3536154/1‑94 (MQ=60)

                                                                                CTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCAT               >  SRR4302542.2607622/1‑94 (MQ=60)

                                                                                CTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCAT               >  SRR4302542.6241826/1‑94 (MQ=60)

                                                                                CTAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCAT               >  SRR4302542.3985147/1‑94 (MQ=60)

                                                                                 TAACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATC              <  SRR4302542.1209088/94‑1 (MQ=60)

                                                                                 TAACGTTGAAGGCGGCCTCTTTGTCTCAGGGCGGGAAAGCCAGGAACGTAAAGCGTTTCACTGGAGGGCGAGCCATAAGCCTGATCTGGTCATC              <  SRR4302542.3595270/94‑1 (MQ=60)

                                                                                  AACGTTGAAGGCGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCTTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCA             <  SRR4302542.5653953/94‑1 (MQ=60)

                                                                                  AACGTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCA             >  SRR4302542.1031721/1‑94 (MQ=60)

                                                                                    CGTTGAGGGTGGTCTTTTTGTCTCATGGCGGGAAAGCCAGGAACGTAAAGCGTTTCACTGGAGGGGGAGCCATAAGCCTGATCTGGTCATCAAA           <  SRR4302542.5815008/94‑1 (MQ=60)

                                                                                     GTTGAGGGCGGTCGCTTTGTCTCAGGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGGGAGCCATAAGCCTGATCTGGTCATCAAAC          <  SRR4302542.2811524/94‑1 (MQ=60)

                                                                                     GTTGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAAC          >  SRR4302542.3794541/1‑94 (MQ=60)

                                                                                      TGGAAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACT         <  SRR4302542.5502014/94‑1 (MQ=60)

                                                                                        GAAGGCGGTCGCTTTGTCTCATGGCTGGCAAACCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCA       >  SRR4302542.5577805/1‑94 (MQ=60)

                                                                                         AAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAA      >  SRR4302542.4287321/1‑94 (MQ=60)

                                                                                         AAGGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAA      >  SRR4302542.5263736/1‑94 (MQ=60)

                                                                                          AGGGGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAAT     <  SRR4302542.4285601/94‑1 (MQ=60)

                                                                                          AGGCGGTCGCTTTGTCTCATGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAAT     <  SRR4302542.1472301/94‑1 (MQ=60)

                                                                                           GGGGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    <  SRR4302542.3639342/94‑1 (MQ=60)

                                                                                           GGGGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    <  SRR4302542.1801683/94‑1 (MQ=60)

                                                                                           GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    >  SRR4302542.246666/1‑94 (MQ=60)

                                                                                           GGCGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    >  SRR4302542.4056852/1‑94 (MQ=60)

                                                                                           GGCGGTCGCTTTGTCTCATGGCTGGAAAGCCAGGAACGTAAAGCGTTTCACTGGATGGGGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    <  SRR4302542.1097391/94‑1 (MQ=60)

                                                                                           GGCGGTCGCTTCGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCCCTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATG    <  SRR4302542.5027836/94‑1 (MQ=60)

                                                                                            GCGGTCGCTTTGTCTCAGGGCGGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGT   <  SRR4302542.5763698/94‑1 (MQ=60)

                                                                                             CGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTT  >  SRR4302542.4998766/1‑94 (MQ=60)

                                                                                             CGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTT  >  SRR4302542.4699191/1‑94 (MQ=60)

                                                                                             CGGTCGCTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTT  >  SRR4302542.813998/1‑94 (MQ=60)

TCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTT  >  NC_000913/3132457‑3132643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`