Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,167,940 G→A G33S (GGT→AGT)  qseB → quorum sensing regulator B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,167,9400GA86.2% 859.7 / 83.8 297G33S (GGT→AGT) qseBquorum sensing regulator B
Reads supporting (aligned to +/- strand):  ref base G (19/22);  new base A (133/123);  total (152/145)
Fisher's exact test for biased strand distribution p-value = 6.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 297 total aligned reads displayed.

ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT  >  NC_000913/3167850‑3168029
                                                                                          |                                                                                         
 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGgtc                                                                                        >  2:5180999/1‑93 (MQ=255)
 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtc                                                                                        <  2:7299461/93‑1 (MQ=255)
  tttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcg                                                                                       >  2:211498/1‑93 (MQ=255)
  tttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcg                                                                                       <  2:5559255/93‑1 (MQ=255)
   ttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcgt                                                                                      <  2:4309717/93‑1 (MQ=255)
    tACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGgtcgtc                                                                                     <  1:6426868/93‑1 (MQ=255)
    tACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcgtc                                                                                     >  1:6381012/1‑93 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    <  1:6608793/93‑1 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    <  1:5621226/93‑1 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    >  1:7393293/1‑93 (MQ=255)
       tGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAgg                                                                                  >  2:2482600/1‑93 (MQ=255)
        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAggg                                                                                 >  2:1507281/1‑93 (MQ=255)
        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAggg                                                                                 >  2:6409085/1‑93 (MQ=255)
          tAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaa                                                                               >  1:390715/1‑93 (MQ=255)
            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGaaaa                                                                             <  2:6025442/93‑1 (MQ=255)
            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaaaa                                                                             <  2:3185796/93‑1 (MQ=255)
             aagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAag                                                                            <  2:6880942/93‑1 (MQ=255)
             aagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAag                                                                            >  2:6767749/1‑93 (MQ=255)
              agaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAaga                                                                           <  2:511845/93‑1 (MQ=255)
              agaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAaga                                                                           >  2:6528051/1‑93 (MQ=255)
               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                          >  1:2924583/1‑93 (MQ=255)
               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                          >  1:5522551/1‑93 (MQ=255)
                 tGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgc                                                                        <  1:1310168/93‑1 (MQ=255)
                 tGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgc                                                                        >  1:538831/1‑93 (MQ=255)
                    cATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCt                                                                     >  2:91010/1‑93 (MQ=255)
                     aTGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCtt                                                                    >  2:3868075/1‑93 (MQ=255)
                        cTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtat                                                                 <  1:5725228/93‑1 (MQ=255)
                         tGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtata                                                                >  2:7329872/1‑93 (MQ=255)
                          gATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAg                                                               >  1:2834072/1‑93 (MQ=255)
                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                              <  2:7082714/93‑1 (MQ=255)
                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                              >  1:3179676/1‑93 (MQ=255)
                            ttGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAgcg                                                             >  2:5371974/1‑93 (MQ=255)
                            ttGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgcg                                                             >  1:1018256/1‑93 (MQ=255)
                               gCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCAc                                                          <  2:4400315/93‑1 (MQ=255)
                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                        >  1:4334107/1‑93 (MQ=255)
                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                        >  1:4819764/1‑93 (MQ=255)
                                  aCGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTAGACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCtt                                                       >  1:1643630/1‑93 (MQ=255)
                                  aCGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCtt                                                       >  2:1131386/1‑93 (MQ=255)
                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                      <  1:5876484/93‑1 (MQ=255)
                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                      <  1:1877793/93‑1 (MQ=255)
                                    ggCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTat                                                     <  1:3756792/93‑1 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  2:2688664/1‑93 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  1:6257303/1‑93 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  2:504447/1‑93 (MQ=255)
                                      cATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatga                                                   >  1:1045259/1‑93 (MQ=255)
                                      cATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatga                                                   <  1:4654391/93‑1 (MQ=255)
                                       aTCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgat                                                  <  1:2675256/93‑1 (MQ=255)
                                       aTCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgat                                                  >  1:1716681/1‑93 (MQ=255)
                                        tCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgatg                                                 >  1:4546644/1‑93 (MQ=255)
                                         cAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGc                                                <  1:7128409/93‑1 (MQ=255)
                                          aaaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCg                                               >  1:5014098/1‑93 (MQ=255)
                                          aaaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCg                                               >  2:2991466/1‑93 (MQ=255)
                                           aaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCgg                                              >  1:772440/1‑93 (MQ=255)
                                            aaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGt                                             >  1:6829363/1‑93 (MQ=255)
                                              cGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGa                                           <  2:826498/93‑1 (MQ=255)
                                              cGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGa                                           <  2:6578881/93‑1 (MQ=255)
                                                  ccTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCt                                       <  2:3753444/93‑1 (MQ=255)
                                                  ccTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCt                                       <  1:340638/93‑1 (MQ=255)
                                                   cTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                      >  2:1776857/1‑93 (MQ=255)
                                                   cTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                      >  2:1288096/1‑93 (MQ=255)
                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                     >  2:4549353/1‑93 (MQ=255)
                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                     <  2:2576414/93‑1 (MQ=255)
                                                     tAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGa                                    >  2:1222002/1‑93 (MQ=255)
                                                      aGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAt                                   <  2:1558824/93‑1 (MQ=255)
                                                        tAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAttt                                 >  1:2036637/1‑93 (MQ=255)
                                                         aaaaTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTa                                >  1:5675549/1‑93 (MQ=255)
                                                           aaTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAAc                              >  2:3287844/1‑93 (MQ=255)
                                                            aTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAAcc                             >  2:5304013/1‑93 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            <  1:7219247/93‑1 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            >  1:510949/1‑93 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            <  1:1477625/93‑1 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            >  2:4767355/1‑93 (MQ=255)
                                                              gggTTTTAGCGTCGACTGGTTTACACAAAGGCGTCTGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCtt                           >  1:4220678/1‑93 (MQ=255)
                                                               ggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTa                          >  2:1363388/1‑93 (MQ=255)
                                                               ggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTCTATAGCGCACCTTGTGATGCGGTGATCCTGGATTTAACCTTa                          >  2:7366103/1‑93 (MQ=255)
                                                                gTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAc                         >  2:1940603/1‑93 (MQ=255)
                                                                 ttttAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                        >  1:4772720/1‑93 (MQ=255)
                                                                 ttttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                        <  1:4601218/93‑1 (MQ=255)
                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAccc                       <  1:4871745/93‑2 (MQ=255)
                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                       <  2:3592210/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  2:4514003/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      >  2:4660758/1‑93 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  1:3601682/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  2:347677/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  1:7276338/93‑1 (MQ=255)
                                                                    tAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAgg                     >  1:1768439/1‑93 (MQ=255)
                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                   <  2:4473785/93‑1 (MQ=255)
                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                   <  2:4865433/93‑1 (MQ=255)
                                                                        gTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 <  2:1353181/93‑1 (MQ=255)
                                                                        gTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 >  2:1845207/1‑93 (MQ=255)
                                                                        gTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 >  1:4133206/1‑93 (MQ=255)
                                                                          cGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatgga               >  1:300656/1‑93 (MQ=255)
                                                                          cGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatgga               >  1:2251394/1‑93 (MQ=255)
                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg             >  1:6769948/1‑93 (MQ=255)
                                                                             cTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatgg            >  2:7481284/1‑93 (MQ=255)
                                                                             cTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatgg            <  2:422376/93‑1 (MQ=255)
                                                                              tGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCGGGCATGGATGGt           <  1:852850/93‑1 (MQ=255)
                                                                               ggTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTc          <  1:6152497/93‑1 (MQ=255)
                                                                                   tACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGa      >  2:5933360/1‑93 (MQ=255)
                                                                                     cacaAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGata    <  1:2438459/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT  >  NC_000913/3167850‑3168029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGC  >  NC_000913/3167847‑3168033
                                                                                             |                                                                                             
CGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAA                                                                                               >  SRR4302542.1084410/1‑94 (MQ=60)
CGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAA                                                                                               >  SRR4302542.4131305/1‑94 (MQ=60)
 GAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAG                                                                                              <  SRR4302542.7137504/94‑1 (MQ=60)
  AATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGT                                                                                             >  SRR4302542.3905690/1‑94 (MQ=60)
    TTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCG                                                                                           <  SRR4302542.573259/94‑1 (MQ=60)
      TTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTC                                                                                         >  SRR4302542.6686477/1‑94 (MQ=60)
      TTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTC                                                                                         >  SRR4302542.6443834/1‑94 (MQ=60)
       TACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCA                                                                                        <  SRR4302542.6490192/94‑1 (MQ=60)
       TACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCA                                                                                        <  SRR4302542.3968223/94‑1 (MQ=60)
       TACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCA                                                                                        >  SRR4302542.7465656/1‑94 (MQ=60)
       TACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCA                                                                                        <  SRR4302542.5686643/94‑1 (MQ=60)
        ACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAG                                                                                       <  SRR4302542.4978822/94‑1 (MQ=60)
        ACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAG                                                                                       <  SRR4302542.6673893/94‑1 (MQ=60)
        ACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAG                                                                                       >  SRR4302542.257329/1‑94 (MQ=60)
        ACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAG                                                                                       <  SRR4302542.5675833/94‑1 (MQ=60)
        ACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAG                                                                                       >  SRR4302542.5923695/1‑94 (MQ=60)
           GATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGA                                                                                    >  SRR4302542.757320/1‑94 (MQ=60)
            ATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAA                                                                                   >  SRR4302542.394092/1‑94 (MQ=60)
            ATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAA                                                                                   >  SRR4302542.1699335/1‑94 (MQ=60)
             TAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAA                                                                                  <  SRR4302542.807290/94‑1 (MQ=60)
              AGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAA                                                                                 >  SRR4302542.3068668/1‑94 (MQ=60)
              AGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAA                                                                                 >  SRR4302542.6331931/1‑94 (MQ=60)
                AAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGA                                                                               >  SRR4302542.469702/1‑94 (MQ=60)
                 AGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAG                                                                              >  SRR4302542.5953975/1‑94 (MQ=60)
                 AGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAG                                                                              >  SRR4302542.2952601/1‑94 (MQ=60)
                 AGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAG                                                                              >  SRR4302542.5576225/1‑94 (MQ=60)
                 AGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAG                                                                              <  SRR4302542.1374066/94‑1 (MQ=60)
                  GATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGG                                                                             <  SRR4302542.173487/94‑1 (MQ=60)
                  GATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGG                                                                             >  SRR4302542.4829776/1‑94 (MQ=60)
                   ATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGC                                                                            >  SRR4302542.4333782/1‑94 (MQ=60)
                   ATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGC                                                                            >  SRR4302542.543492/1‑94 (MQ=60)
                    TGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCG                                                                           <  SRR4302542.6452856/94‑1 (MQ=60)
                    TGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCG                                                                           <  SRR4302542.422028/94‑1 (MQ=60)
                    TGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCG                                                                           <  SRR4302542.1321458/94‑1 (MQ=60)
                      ACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCT                                                                         >  SRR4302542.5643300/1‑94 (MQ=60)
                       CATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTT                                                                        >  SRR4302542.2265352/1‑94 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       <  SRR4302542.1761736/94‑1 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       >  SRR4302542.1784443/1‑94 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       >  SRR4302542.4693416/1‑94 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       >  SRR4302542.1588332/1‑94 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       >  SRR4302542.3463981/1‑94 (MQ=60)
                        ATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTT                                                                       >  SRR4302542.6290952/1‑94 (MQ=60)
                          GCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTAT                                                                     <  SRR4302542.92260/94‑1 (MQ=60)
                           CTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATA                                                                    <  SRR4302542.4972237/94‑1 (MQ=60)
                           CTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATA                                                                    <  SRR4302542.5780798/94‑1 (MQ=60)
                           CTGATTGGCGACGCCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGA‑GCGCTTTATAG                                                                   <  SRR4302542.7369774/94‑1 (MQ=60)
                            TGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAG                                                                   <  SRR4302542.6984232/94‑1 (MQ=60)
                            TGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAG                                                                   >  SRR4302542.2861312/1‑94 (MQ=60)
                             GATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGC                                                                  >  SRR4302542.3209808/1‑94 (MQ=60)
                             GATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGC                                                                  <  SRR4302542.1114684/94‑1 (MQ=60)
                             GATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGC                                                                  >  SRR4302542.2231595/1‑94 (MQ=60)
                              ATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCG                                                                 >  SRR4302542.1027030/1‑94 (MQ=60)
                                TGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCA                                                               >  SRR4302542.53038/1‑94 (MQ=60)
                                  GCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACC                                                             >  SRR4302542.6861523/1‑94 (MQ=60)
                                   CGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCT                                                            >  SRR4302542.4376703/1‑94 (MQ=60)
                                   CGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCT                                                            >  SRR4302542.4866737/1‑94 (MQ=60)
                                    GACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTAGACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTT                                                           >  SRR4302542.1657829/1‑94 (MQ=60)
                                    GACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTT                                                           >  SRR4302542.2801906/1‑94 (MQ=60)
                                     ACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTA                                                          <  SRR4302542.5748655/94‑1 (MQ=60)
                                      CGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTAT                                                         <  SRR4302542.1894046/94‑1 (MQ=60)
                                      CGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTAT                                                         <  SRR4302542.5933452/94‑1 (MQ=60)
                                       GGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATG                                                        <  SRR4302542.3793961/94‑1 (MQ=60)
                                       GGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATG                                                        >  SRR4302542.6318958/1‑94 (MQ=60)
                                        GCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGA                                                       >  SRR4302542.1912686/1‑94 (MQ=60)
                                        GCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGA                                                       >  SRR4302542.1054231/1‑94 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      <  SRR4302542.1030374/94‑1 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      <  SRR4302542.4901779/94‑1 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      >  SRR4302542.1731590/1‑94 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      <  SRR4302542.4699893/94‑1 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      <  SRR4302542.7268341/94‑1 (MQ=60)
                                         CATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGAT                                                      <  SRR4302542.296879/94‑1 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     >  SRR4302542.2861994/1‑94 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     <  SRR4302542.4689674/94‑1 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     >  SRR4302542.4591150/1‑94 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     >  SRR4302542.4625017/1‑94 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     >  SRR4302542.5139075/1‑94 (MQ=60)
                                          ATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATG                                                     <  SRR4302542.2701081/94‑1 (MQ=60)
                                            CAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCG                                                   <  SRR4302542.7198368/94‑1 (MQ=60)
                                            CAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCG                                                   >  SRR4302542.5062792/1‑94 (MQ=60)
                                             AAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGG                                                  >  SRR4302542.779115/1‑94 (MQ=60)
                                              AAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGT                                                 >  SRR4302542.6896482/1‑94 (MQ=60)
                                                 CGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGAT                                              >  SRR4302542.4899407/1‑94 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            >  SRR4302542.6840753/1‑94 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            <  SRR4302542.3268736/94‑1 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            >  SRR4302542.1801579/1‑94 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            >  SRR4302542.6604418/1‑94 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            <  SRR4302542.3403729/94‑1 (MQ=60)
                                                   GGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCC                                            >  SRR4302542.3777778/1‑94 (MQ=60)
                                                    GCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCT                                           <  SRR4302542.7095031/94‑1 (MQ=60)
                                                    GCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCT                                           <  SRR4302542.6322428/94‑1 (MQ=60)
                                                     CCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTG                                          <  SRR4302542.343594/94‑1 (MQ=60)
                                                      CTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGG                                         >  SRR4302542.4037869/1‑94 (MQ=60)
                                                       TTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGA                                        <  SRR4302542.778605/94‑1 (MQ=60)
                                                        TAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAT                                       <  SRR4302542.1117499/94‑1 (MQ=60)
                                                          GTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTT                                     <  SRR4302542.4256218/94‑1 (MQ=60)
                                                          GTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTT                                     >  SRR4302542.2054245/1‑94 (MQ=60)
                                                          GTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTT                                     >  SRR4302542.435042/1‑94 (MQ=60)
                                                           TAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTA                                    >  SRR4302542.5730662/1‑94 (MQ=60)
                                                            AAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAA                                   >  SRR4302542.1399559/1‑94 (MQ=60)
                                                              AATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACC                                 <  SRR4302542.741326/94‑1 (MQ=60)
                                                              AATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACC                                 >  SRR4302542.1711097/1‑94 (MQ=60)
                                                               ATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCT                                >  SRR4302542.515386/1‑94 (MQ=60)
                                                               ATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCT                                <  SRR4302542.2957286/94‑1 (MQ=60)
                                                               ATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCT                                <  SRR4302542.5670408/94‑1 (MQ=60)
                                                                TGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTT                               <  SRR4302542.1490372/94‑1 (MQ=60)
                                                                TGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTT                               <  SRR4302542.7290065/94‑1 (MQ=60)
                                                                TGGGTTTTAGCGTCGACTGGTTTACACAAAGGCGTCTGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTT                               >  SRR4302542.4262269/1‑94 (MQ=60)
                                                                 GGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTA                              >  SRR4302542.1595196/1‑94 (MQ=60)
                                                                   GTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACC                            >  SRR4302542.4819245/1‑94 (MQ=60)
                                                                   GTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACC                            <  SRR4302542.2901082/94‑1 (MQ=60)
                                                                    TTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCA                           <  SRR4302542.4646193/94‑1 (MQ=60)
                                                                     TTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCCG                          <  SRR4302542.4919166/94‑1 (MQ=60)
                                                                      TTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGG                         >  SRR4302542.1783773/1‑94 (MQ=60)
                                                                      TTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGG                         <  SRR4302542.7347702/94‑1 (MQ=60)
                                                                      TTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGG                         <  SRR4302542.3635248/94‑1 (MQ=60)
                                                                      TTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGG                         <  SRR4302542.6677363/94‑1 (MQ=60)
                                                                      NNAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGG                         <  SRR4302542.2859300/94‑1 (MQ=60)
                                                                         GCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCAT                      <  SRR4302542.5536393/94‑1 (MQ=60)
                                                                         GCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCAT                      <  SRR4302542.4737314/94‑1 (MQ=60)
                                                                          CGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATG                     <  SRR4302542.6161785/94‑1 (MQ=60)
                                                                          CGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATG                     >  SRR4302542.4173934/1‑94 (MQ=60)
                                                                           GTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGG                    <  SRR4302542.7340559/94‑1 (MQ=60)
                                                                           GTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGG                    >  SRR4302542.4443410/1‑94 (MQ=60)
                                                                            TCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGA                   >  SRR4302542.303274/1‑94 (MQ=60)
                                                                            TCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGA                   >  SRR4302542.2270758/1‑94 (MQ=60)
                                                                              GACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATG                 >  SRR4302542.5211405/1‑94 (MQ=60)
                                                                              GACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATG                 >  SRR4302542.6836520/1‑94 (MQ=60)
                                                                              GACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATG                 >  SRR4302542.820451/1‑94 (MQ=60)
                                                                               ACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGG                >  SRR4302542.4826516/1‑94 (MQ=60)
                                                                                CTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGT               >  SRR4302542.3665101/1‑94 (MQ=60)
                                                                                CTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGT               <  SRR4302542.3104439/94‑1 (MQ=60)
                                                                                 TGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCGGGCATGGATGGTC              <  SRR4302542.860198/94‑1 (MQ=60)
                                                                                 TGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTC              <  SRR4302542.5519275/94‑1 (MQ=60)
                                                                                 TGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTC              <  SRR4302542.728830/94‑1 (MQ=60)
                                                                                  GGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCG             <  SRR4302542.6445626/94‑1 (MQ=60)
                                                                                  GGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCG             <  SRR4302542.6212065/94‑1 (MQ=60)
                                                                                      TACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGAT         <  SRR4302542.4575765/94‑1 (MQ=60)
                                                                                      TACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGAT         <  SRR4302542.5152247/94‑1 (MQ=60)
                                                                                      TACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGAT         >  SRR4302542.2417516/1‑94 (MQ=60)
                                                                                       ACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATA        <  SRR4302542.3438939/94‑1 (MQ=60)
                                                                                       ACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATA        >  SRR4302542.4623870/1‑94 (MQ=60)
                                                                                       ACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATA        <  SRR4302542.6258652/94‑1 (MQ=60)
                                                                                        CACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATAT       <  SRR4302542.6520004/94‑1 (MQ=60)
                                                                                        CACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATAT       <  SRR4302542.7239718/94‑1 (MQ=60)
                                                                                        CACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATAT       <  SRR4302542.2462186/94‑1 (MQ=60)
                                                                                         ACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT      <  SRR4302542.2553893/94‑1 (MQ=60)
                                                                                         ACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT      <  SRR4302542.5908255/94‑1 (MQ=60)
                                                                                          CAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTT     <  SRR4302542.2383504/94‑1 (MQ=60)
                                                                                          CAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTT     >  SRR4302542.5142375/1‑94 (MQ=60)
                                                                                          CAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTT     <  SRR4302542.3884615/94‑1 (MQ=60)
                                                                                          CAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTT     <  SRR4302542.1929033/94‑1 (MQ=60)
                                                                                           AAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTT    <  SRR4302542.1955626/94‑1 (MQ=60)
                                                                                           AAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTT    >  SRR4302542.6619148/1‑94 (MQ=60)
                                                                                           AAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGACGCGATATTTT    >  SRR4302542.698669/1‑94 (MQ=60)
                                                                                            AAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTG   <  SRR4302542.1047922/94‑1 (MQ=60)
                                                                                            AAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTG   <  SRR4302542.5896033/94‑1 (MQ=60)
                                                                                             AGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGC  <  SRR4302542.5310511/94‑1 (MQ=60)
                                                                                             AGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGC  <  SRR4302542.4317170/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGC  >  NC_000913/3167847‑3168033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑