Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,222,944 |
4 bp→AGCA |
coding (2671‑2674/3093 nt) |
b3076 → |
evolved beta‑D‑galactosidase alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,222,944 | 0 | C | A | 99.6%
| 926.5
/ NA
| 242 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (114/127); total (115/127) |
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | NC_000913 | 3,222,945 | 0 | A | G | 100.0%
| 818.9
/ NA
| 242 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (115/127); total (115/127) |
| * | NC_000913 | 3,222,946 | 0 | A | C | 100.0%
| 815.1
/ NA
| 242 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (115/127); total (115/127) |
| * | NC_000913 | 3,222,947 | 0 | G | A | 100.0%
| 889.4
/ NA
| 242 | A892T (GCC→ACC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (115/127); total (115/127) |
Only 100 of 242 total aligned reads displayed.
GATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTA > NC_000913/3222863‑3223028
||||
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 2:5436519/1‑93 (MQ=255)
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 1:6944985/1‑93 (MQ=255)
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 1:6015069/1‑93 (MQ=255)
tCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGc < 1:4595635/93‑1 (MQ=255)
nngTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa < 1:1907262/91‑1 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa > 1:5976126/1‑93 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa > 2:5894351/1‑93 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa < 2:2345292/93‑1 (MQ=255)
aGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCa < 1:4486832/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCAt < 2:3789946/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCAt > 1:5761379/1‑93 (MQ=255)
tGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGt > 1:7109621/1‑93 (MQ=255)
gTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCga > 1:6355235/1‑93 (MQ=255)
gTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCga < 1:4045320/93‑1 (MQ=255)
gTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCga > 2:4446764/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 2:6121852/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 1:5683573/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 2:3893012/1‑93 (MQ=255)
aTTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgaga < 2:1952828/93‑1 (MQ=255)
ttACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGaa < 2:249027/93‑1 (MQ=255)
ttACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGaa < 2:4057069/93‑1 (MQ=255)
tACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAAc < 1:421581/93‑1 (MQ=255)
tACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAAc < 2:1237175/93‑1 (MQ=255)
tACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAAc < 2:5065284/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 2:3013209/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 1:3718646/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 2:5998668/93‑1 (MQ=255)
ggTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt < 2:4309939/93‑1 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc < 2:608629/93‑1 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc < 2:4983429/93‑1 (MQ=255)
tCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATcc > 1:5468104/1‑93 (MQ=255)
tCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATACCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATcc > 1:5666034/1‑93 (MQ=255)
cGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATccc < 2:6656137/93‑1 (MQ=255)
cGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATccc < 2:6396759/93‑1 (MQ=255)
gTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCt < 2:283141/93‑1 (MQ=255)
gTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCt < 1:2384243/93‑1 (MQ=255)
gTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCt < 1:3835071/93‑1 (MQ=255)
tGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCtt > 2:620597/1‑93 (MQ=255)
aCCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTccc < 2:5406558/93‑1 (MQ=255)
gggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCa > 1:1168475/1‑93 (MQ=255)
gCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGa > 2:2199081/1‑93 (MQ=255)
cGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaa < 2:3464599/93‑1 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac < 1:5213440/93‑1 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac > 2:5737160/1‑93 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac < 2:1943343/93‑1 (MQ=255)
gAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaac > 1:4391556/1‑93 (MQ=255)
aaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaa > 1:2847093/1‑93 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 1:2016468/93‑1 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 1:5243904/93‑1 (MQ=255)
aCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACg < 2:6238988/93‑1 (MQ=255)
cTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACgg > 1:1309975/1‑93 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGt > 1:4849313/1‑93 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGt < 2:2234812/93‑1 (MQ=255)
aCGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa < 1:333944/93‑1 (MQ=255)
aCGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa < 2:1608705/93‑1 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 2:2605164/93‑1 (MQ=255)
cGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTaa < 2:2742334/93‑1 (MQ=255)
gCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAc < 1:3914721/93‑1 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc > 1:937364/1‑93 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc < 2:7193361/93‑1 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc < 2:7481521/93‑1 (MQ=255)
gACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGt > 1:1774836/1‑93 (MQ=255)
gACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGt > 2:5810021/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc > 2:880678/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc > 2:1058663/1‑93 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa > 2:7128189/1‑93 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa < 2:6814854/93‑1 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa > 2:6433255/1‑93 (MQ=255)
ccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCa < 2:6977065/93‑1 (MQ=255)
cagcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAt < 1:547663/93‑1 (MQ=255)
cagcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAt > 1:1880421/1‑93 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg > 2:183540/1‑93 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg > 2:4667101/1‑93 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg > 1:3891662/1‑93 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGt < 1:5158575/93‑1 (MQ=255)
agGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTcc > 1:4326969/1‑93 (MQ=255)
agGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTcc < 1:7197364/93‑1 (MQ=255)
gCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc < 1:5019136/93‑1 (MQ=255)
gCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc > 2:4706944/1‑93 (MQ=255)
gCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc < 2:1563159/93‑1 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt < 1:6912612/93‑1 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt < 1:686193/93‑1 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt > 2:5972143/1‑93 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt < 1:1539155/93‑1 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTg < 2:3346041/93‑1 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTg > 1:6771604/1‑93 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTg > 1:871003/1‑93 (MQ=255)
aaCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTgg > 1:1439512/1‑93 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa < 2:5114575/93‑1 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa > 1:3543682/1‑93 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa < 2:7283525/93‑1 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa < 2:799133/93‑1 (MQ=255)
catcatCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAc > 2:1334617/1‑93 (MQ=255)
atcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACg < 2:2956114/93‑1 (MQ=255)
atcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACg > 2:7377614/1‑93 (MQ=255)
atcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACg < 1:1001025/93‑1 (MQ=255)
atcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCa > 2:4039383/1‑93 (MQ=255)
atcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCa > 2:3936849/1‑93 (MQ=255)
tcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAc > 1:2584596/1‑93 (MQ=255)
atCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACt < 2:3510374/93‑1 (MQ=255)
||||
GATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTA > NC_000913/3222863‑3223028
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222864‑3223027
|
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGC < SRR4302542.7495830/94‑1 (MQ=60)
TCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCC < SRR4302542.4640573/94‑1 (MQ=60)
CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCA > SRR4302542.6033961/1‑94 (MQ=60)
NNGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302542.1923743/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302542.1486371/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302542.1977788/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302542.4530867/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT < SRR4302542.7227560/94‑1 (MQ=60)
AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCAT > SRR4302542.5817306/1‑94 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGT > SRR4302542.7179407/1‑94 (MQ=60)
TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTT < SRR4302542.6994973/94‑1 (MQ=60)
GCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCG < SRR4302542.552184/94‑1 (MQ=60)
CGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGA > SRR4302542.6417833/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG > SRR4302542.1398746/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG > SRR4302542.920946/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG > SRR4302542.5738761/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG < SRR4302542.4085231/94‑1 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAG < SRR4302542.5977813/94‑1 (MQ=60)
TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGA > SRR4302542.6959918/1‑94 (MQ=60)
ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAA < SRR4302542.3821874/94‑1 (MQ=60)
ATTACGGTCGCGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAA > SRR4302542.4688927/1‑94 (MQ=60)
TTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAAC > SRR4302542.3940912/1‑94 (MQ=60)
TTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAAC > SRR4302542.5395766/1‑94 (MQ=60)
TACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACT < SRR4302542.4930551/94‑1 (MQ=60)
TACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACT < SRR4302542.425200/94‑1 (MQ=60)
ACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTA > SRR4302542.3391231/1‑94 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTAT < SRR4302542.3755436/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302542.6418783/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302542.2068004/94‑1 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCC > SRR4302542.5521221/1‑94 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATACCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCC > SRR4302542.5721070/1‑94 (MQ=60)
TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCC < SRR4302542.3777037/94‑1 (MQ=60)
TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCC < SRR4302542.1091298/94‑1 (MQ=60)
CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT > SRR4302542.4375841/1‑94 (MQ=60)
CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT < SRR4302542.278635/94‑1 (MQ=60)
CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT > SRR4302542.6872152/1‑94 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT < SRR4302542.2406277/94‑1 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT < SRR4302542.6005799/94‑1 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT > SRR4302542.1914997/1‑94 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTA < SRR4302542.3872999/94‑1 (MQ=60)
TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC < SRR4302542.4307240/94‑1 (MQ=60)
GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC < SRR4302542.3290673/94‑1 (MQ=60)
CGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCA > SRR4302542.1178566/1‑94 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG > SRR4302542.3653666/1‑94 (MQ=60)
CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC > SRR4302542.4434644/1‑94 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA < SRR4302542.5264140/94‑1 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302542.789151/1‑94 (MQ=60)
AAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAA > SRR4302542.2874461/1‑94 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC > SRR4302542.4871803/1‑94 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC < SRR4302542.2491934/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302542.5294877/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG > SRR4302542.3285290/1‑94 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302542.2033885/94‑1 (MQ=60)
ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG > SRR4302542.1321263/1‑94 (MQ=60)
ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG < SRR4302542.4094291/94‑1 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT > SRR4302542.2500985/1‑94 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT > SRR4302542.4896534/1‑94 (MQ=60)
ACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAA < SRR4302542.404148/94‑1 (MQ=60)
ACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAA < SRR4302542.336843/94‑1 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC > SRR4302542.5292377/1‑94 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC < SRR4302542.448839/94‑1 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC > SRR4302542.945439/1‑94 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC < SRR4302542.3953350/94‑1 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC < SRR4302542.5210645/94‑1 (MQ=60)
CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG < SRR4302542.5511647/94‑1 (MQ=60)
CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT < SRR4302542.136852/94‑1 (MQ=60)
CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT > SRR4302542.1790219/1‑94 (MQ=60)
CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT > SRR4302542.5777839/1‑94 (MQ=60)
ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA < SRR4302542.6933509/94‑1 (MQ=60)
ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA < SRR4302542.4313582/94‑1 (MQ=60)
CCAGCAGGCTAACATCGTCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT < SRR4302542.1648574/94‑1 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT < SRR4302542.1006723/94‑1 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT < SRR4302542.6063665/94‑1 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT > SRR4302542.1896699/1‑94 (MQ=60)
CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT > SRR4302542.3932584/1‑94 (MQ=60)
CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG < SRR4302542.552389/94‑1 (MQ=60)
CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG < SRR4302542.388279/94‑1 (MQ=60)
CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG > SRR4302542.3930082/1‑94 (MQ=60)
GCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTC < SRR4302542.5208706/94‑1 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC > SRR4302542.5733275/1‑94 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC > SRR4302542.4369506/1‑94 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC > SRR4302542.5245867/1‑94 (MQ=60)
AGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG < SRR4302542.7267992/94‑1 (MQ=60)
AGGCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG > SRR4302542.1941805/1‑94 (MQ=60)
GCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCT < SRR4302542.5067878/94‑1 (MQ=60)
GCTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCT > SRR4302542.614627/1‑94 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG > SRR4302542.878512/1‑94 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG > SRR4302542.6838190/1‑94 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG < SRR4302542.1552446/94‑1 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG < SRR4302542.692119/94‑1 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG < SRR4302542.6980474/94‑1 (MQ=60)
TAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG < SRR4302542.5607272/94‑1 (MQ=60)
TAACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG > SRR4302542.1451946/1‑94 (MQ=60)
AACATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGA > SRR4302542.3576786/1‑94 (MQ=60)
CATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG < SRR4302542.564363/94‑1 (MQ=60)
CATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG < SRR4302542.7153769/94‑1 (MQ=60)
ATCATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGG < SRR4302542.1009639/94‑1 (MQ=60)
ATCTATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302542.444992/1‑94 (MQ=60)
ATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302542.5102080/1‑94 (MQ=60)
ATCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302542.2609631/1‑94 (MQ=60)
TCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT < SRR4302542.7021510/94‑1 (MQ=60)
TCGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT < SRR4302542.1627531/94‑1 (MQ=60)
CGATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG < SRR4302542.1791761/94‑1 (MQ=60)
ATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > SRR4302542.4432474/1‑94 (MQ=60)
ATATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > SRR4302542.3630203/1‑94 (MQ=60)
TATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGGCGGCACTGACT < SRR4302542.6213336/94‑1 (MQ=60)
TATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT < SRR4302542.4474623/94‑1 (MQ=60)
TATCTGGCGCAGCA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > SRR4302542.112706/1‑94 (MQ=60)
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ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222864‑3223027
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
