Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,229,223 T→C intergenic (+343/‑83) ygjK → / → ygjL putative isomerase/putative NADPH dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,229,2230TC76.4% 523.7 / 202.2 313intergenic (+343/‑83)ygjK/ygjLputative isomerase/putative NADPH dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (35/39);  new base C (97/142);  total (132/181)
Fisher's exact test for biased strand distribution p-value = 3.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 320 total aligned reads displayed.

GCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAC  >  NC_000913/3229131‑3229314
                                                                                            |                                                                                           
  aaTTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCAcccc                                                                                           >  1:1514957/1‑93 (MQ=255)
   aTTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTccc                                                                                          >  2:532530/1‑93 (MQ=255)
    ttCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCGCCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCAcccccc                                                                                         >  1:2615066/1‑93 (MQ=255)
     tCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCccct                                                                                        <  1:107970/93‑1 (MQ=255)
        gTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCccctttt                                                                                     <  2:6731096/93‑1 (MQ=255)
        gTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCccctttt                                                                                     <  1:6748930/93‑1 (MQ=255)
         tAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCcccttttc                                                                                    >  2:387322/1‑93 (MQ=255)
           aCCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCcccttttccc                                                                                  <  1:2148925/93‑1 (MQ=255)
           aCCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCcccttttccc                                                                                  <  2:5909428/93‑1 (MQ=255)
           aCCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCccctttcccc                                                                                  >  1:4537916/1‑93 (MQ=255)
            ccTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCcccttttccct                                                                                 <  1:6588693/93‑1 (MQ=255)
                 aTAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTtct                                                                            <  2:480243/93‑1 (MQ=255)
                  tAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTtctc                                                                           <  1:3424670/93‑1 (MQ=255)
                   aaaaCGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTcc                                                                          <  1:530392/93‑1 (MQ=255)
                    aaaCGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCACACTCCCCTTTTCTCTTTTCTCCg                                                                         >  1:6652284/1‑93 (MQ=255)
                      aCGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGc                                                                       <  1:6942008/93‑1 (MQ=255)
                         cgACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGAc                                                                    <  2:4840316/93‑1 (MQ=255)
                           aCAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACgg                                                                  >  2:2076857/1‑93 (MQ=255)
                           aCAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACgg                                                                  <  1:5052457/93‑1 (MQ=255)
                            cAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGc                                                                 <  2:2586844/93‑1 (MQ=255)
                             aaGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCt                                                                >  1:4441650/1‑93 (MQ=255)
                             aaGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCt                                                                <  2:6935680/93‑1 (MQ=255)
                              aGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTa                                                               >  1:4077877/1‑93 (MQ=255)
                                 gTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAt                                                            >  1:972177/1‑93 (MQ=255)
                                  tCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAtt                                                           >  1:3727942/1‑93 (MQ=255)
                                  tCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAtt                                                           <  2:4266376/93‑1 (MQ=255)
                                  tCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAtt                                                           >  2:4583162/1‑93 (MQ=255)
                                  tCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAtt                                                           >  2:3958001/1‑93 (MQ=255)
                                   cGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTa                                                          <  2:4995344/93‑1 (MQ=255)
                                    gCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAg                                                         >  1:5131421/1‑93 (MQ=255)
                                     cATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGa                                                        <  2:7231469/93‑1 (MQ=255)
                                      aTCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGaa                                                       >  1:5541880/1‑93 (MQ=255)
                                      aTCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGaa                                                       <  1:2866705/93‑1 (MQ=255)
                                       tCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAc                                                      >  2:1900879/1‑93 (MQ=255)
                                       tCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAc                                                      >  1:5954933/1‑93 (MQ=255)
                                       tCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAc                                                      >  2:4044338/1‑93 (MQ=255)
                                       tCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAc                                                      <  2:1411165/93‑1 (MQ=255)
                                        ccGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACt                                                     >  1:4639688/1‑93 (MQ=255)
                                        ccGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACt                                                     <  1:1886965/93‑1 (MQ=255)
                                         cGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTc                                                    <  1:1260950/93‑1 (MQ=255)
                                         cGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTc                                                    >  1:4215763/1‑93 (MQ=255)
                                          ggCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCa                                                   >  1:5912823/1‑93 (MQ=255)
                                            cGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATc                                                 <  1:3582808/93‑1 (MQ=255)
                                             gTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATcc                                                <  1:6714271/93‑1 (MQ=255)
                                              ttATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCg                                               >  1:4812078/1‑93 (MQ=255)
                                               tATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGa                                              <  2:3589259/93‑1 (MQ=255)
                                                aTCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGAc                                             <  1:1000019/93‑1 (MQ=255)
                                                 tCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGAcc                                            <  2:1339647/93‑1 (MQ=255)
                                                 tCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGAcc                                            <  2:5499504/93‑1 (MQ=255)
                                                  cACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACca                                           >  1:1953000/1‑93 (MQ=255)
                                                   aCCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACcac                                          >  2:282587/1‑93 (MQ=255)
                                                   aCCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACcac                                          >  2:1164074/1‑93 (MQ=255)
                                                    ccGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACcaca                                         >  1:5406354/1‑93 (MQ=255)
                                                     cGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACAt                                        <  1:4139555/93‑1 (MQ=255)
                                                      gggCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATa                                       <  2:6017947/93‑1 (MQ=255)
                                                       ggCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATaa                                      >  1:901838/1‑93 (MQ=255)
                                                        gCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAAc                                     <  2:7369734/93‑1 (MQ=255)
                                                         cGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACa                                    >  2:747620/1‑93 (MQ=255)
                                                         cGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACa                                    <  1:7474653/93‑1 (MQ=255)
                                                          gTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACaa                                   <  2:343158/93‑1 (MQ=255)
                                                           tATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAat                                  >  1:4373847/1‑93 (MQ=255)
                                                           tATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAat                                  >  2:2284670/1‑93 (MQ=255)
                                                           tATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAat                                  >  1:6282920/1‑93 (MQ=255)
                                                            aTTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAatt                                 <  1:164508/93‑1 (MQ=255)
                                                            aTTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAatt                                 >  2:509245/1‑93 (MQ=255)
                                                            aTTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAatt                                 >  1:7034326/1‑93 (MQ=255)
                                                             ttCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAatta                                <  2:6241060/93‑1 (MQ=255)
                                                              tCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAattat                               <  2:6144391/93‑1 (MQ=255)
                                                              tCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAattat                               >  1:3117657/1‑93 (MQ=255)
                                                              tCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAattat                               >  2:2458948/1‑93 (MQ=255)
                                                               cTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAattatt                              <  2:3696342/93‑1 (MQ=255)
                                                                tttttGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTAttt                             <  1:7150193/93‑1 (MQ=255)
                                                                 ttttGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTAtttt                            >  2:1720869/1‑93 (MQ=255)
                                                                   ttGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTAc                          <  1:2715118/93‑1 (MQ=255)
                                                                    tGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACa                         <  1:6097533/93‑1 (MQ=255)
                                                                      aaTCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATa                       <  2:5390523/93‑1 (MQ=255)
                                                                       aTCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATAc                      <  2:6570060/93‑1 (MQ=255)
                                                                        tCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACt                     <  1:1297294/93‑1 (MQ=255)
                                                                        tCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACt                     >  2:4743260/1‑93 (MQ=255)
                                                                        tCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACt                     <  1:3031662/93‑1 (MQ=255)
                                                                        tCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACt                     <  2:2170109/93‑1 (MQ=255)
                                                                         cccATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTg                    <  1:147285/93‑1 (MQ=255)
                                                                          ccATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTgg                   >  2:5696002/1‑93 (MQ=255)
                                                                          ccATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTgg                   <  2:2011692/93‑1 (MQ=255)
                                                                          ccATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTgg                   <  1:6023360/93‑1 (MQ=255)
                                                                              cacaAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACaa               <  2:6344519/93‑1 (MQ=255)
                                                                              cacaAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACaa               <  1:864150/93‑1 (MQ=255)
                                                                               acaAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAAt              <  1:6402022/93‑1 (MQ=255)
                                                                                caAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAAtt             <  1:3164124/93‑1 (MQ=255)
                                                                                  aaCCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAAtttt           >  1:5626833/1‑93 (MQ=255)
                                                                                  aaCCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAAtttt           >  2:6758975/1‑93 (MQ=255)
                                                                                   aCCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTa          <  2:4484795/93‑1 (MQ=255)
                                                                                     cccGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATg        <  2:3109666/93‑1 (MQ=255)
                                                                                      ccGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGa       <  1:328156/93‑1 (MQ=255)
                                                                                        gCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGc     >  2:3768212/1‑93 (MQ=255)
                                                                                        gCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGc     >  1:7272533/1‑93 (MQ=255)
                                                                                        gCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGc     <  1:1182758/93‑1 (MQ=255)
                                                                                          aCTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTa   >  2:5037883/1‑93 (MQ=255)
                                                                                          aCTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTa   <  1:2443285/93‑1 (MQ=255)
                                                                                           cTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAc  >  2:705653/1‑93 (MQ=255)
                                                                                            |                                                                                           
GCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAC  >  NC_000913/3229131‑3229314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCC  >  NC_000913/3229130‑3229316
                                                                                             |                                                                                             
TGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACT                                                                                               <  SRR4302542.3022755/94‑1 (MQ=60)
TGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACT                                                                                               >  SRR4302542.2593243/1‑94 (MQ=60)
  CAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCC                                                                                             >  SRR4302542.1528043/1‑94 (MQ=60)
   AATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCC                                                                                            >  SRR4302542.911132/1‑94 (MQ=60)
    ATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCGCCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCC                                                                                           >  SRR4302542.2640332/1‑94 (MQ=60)
     TTCCGTAACCTGGATAAAACCCGGCAAGCGTAGCATCCGGCGTTATCATCGGTCGTATTCTTTTTGAATTTCATCACAAACACCGCACTCCCCT                                                                                          >  SRR4302542.871421/1‑94 (MQ=60)
      TCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTT                                                                                         <  SRR4302542.6058594/94‑1 (MQ=60)
      TCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTT                                                                                         <  SRR4302542.108854/94‑1 (MQ=60)
        CGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTT                                                                                       >  SRR4302542.7059939/1‑94 (MQ=60)
        CGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTT                                                                                       <  SRR4302542.5649004/94‑1 (MQ=60)
         GTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTC                                                                                      <  SRR4302542.6815337/94‑1 (MQ=60)
          TAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCC                                                                                     <  SRR4302542.6360457/94‑1 (MQ=60)
          TAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCC                                                                                     <  SRR4302542.3271350/94‑1 (MQ=60)
           AACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCC                                                                                    >  SRR4302542.1245701/1‑94 (MQ=60)
           AACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTCCCC                                                                                    >  SRR4302542.4582349/1‑94 (MQ=60)
            ACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCT                                                                                   <  SRR4302542.2167449/94‑1 (MQ=60)
            ACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCT                                                                                   >  SRR4302542.1941584/1‑94 (MQ=60)
             CCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTT                                                                                  <  SRR4302542.6653612/94‑1 (MQ=60)
             CCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTT                                                                                  >  SRR4302542.149760/1‑94 (MQ=60)
             CCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTT                                                                                  <  SRR4302542.3588758/94‑1 (MQ=60)
             CCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTT                                                                                  >  SRR4302542.5790203/1‑94 (MQ=60)
             CCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTT                                                                                  <  SRR4302542.183288/94‑1 (MQ=60)
              CTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTT                                                                                 >  SRR4302542.1190405/1‑94 (MQ=60)
               TGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTT                                                                                >  SRR4302542.1790590/1‑94 (MQ=60)
               TGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTT                                                                                <  SRR4302542.4276297/94‑1 (MQ=60)
                GGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTC                                                                               <  SRR4302542.6669630/94‑1 (MQ=60)
                GGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTC                                                                               >  SRR4302542.680711/1‑94 (MQ=60)
                 GATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCT                                                                              >  SRR4302542.5228421/1‑94 (MQ=60)
                 GATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCT                                                                              <  SRR4302542.3179539/94‑1 (MQ=60)
                 GANNNAACGCGACNNGCGTCGCATNNGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCT                                                                              >  SRR4302542.3667651/1‑94 (MQ=60)
                  ATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTC                                                                             <  SRR4302542.999934/94‑1 (MQ=60)
                  ATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTC                                                                             >  SRR4302542.4737849/1‑94 (MQ=60)
                   TAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCC                                                                            <  SRR4302542.1061066/94‑1 (MQ=60)
                   TAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCC                                                                            <  SRR4302542.3456747/94‑1 (MQ=60)
                    AAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCG                                                                           >  SRR4302542.680394/1‑94 (MQ=60)
                    AAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCG                                                                           <  SRR4302542.534972/94‑1 (MQ=60)
                    AAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCG                                                                           <  SRR4302542.6806716/94‑1 (MQ=60)
                    AAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCG                                                                           <  SRR4302542.899894/94‑1 (MQ=60)
                    AAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCACACTCCCCTTTTCTCTTTTCTCCG                                                                           >  SRR4302542.6717841/1‑94 (MQ=60)
                     AAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGG                                                                          <  SRR4302542.4311831/94‑1 (MQ=60)
                       ACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCG                                                                        <  SRR4302542.7010215/94‑1 (MQ=60)
                        CGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGA                                                                       >  SRR4302542.287538/1‑94 (MQ=60)
                         GCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGAC                                                                      <  SRR4302542.736479/94‑1 (MQ=60)
                         GCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGAC                                                                      <  SRR4302542.2935076/94‑1 (MQ=60)
                          CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACG                                                                     >  SRR4302542.3211456/1‑94 (MQ=60)
                          CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACG                                                                     >  SRR4302542.4610723/1‑94 (MQ=60)
                          CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACG                                                                     <  SRR4302542.6735151/94‑1 (MQ=60)
                            ACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGC                                                                   <  SRR4302542.5101518/94‑1 (MQ=60)
                             CAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCT                                                                  >  SRR4302542.7106765/1‑94 (MQ=60)
                             CAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCT                                                                  >  SRR4302542.579763/1‑94 (MQ=60)
                             CAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCT                                                                  >  SRR4302542.4485237/1‑94 (MQ=60)
                             CAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCT                                                                  >  SRR4302542.4543211/1‑94 (MQ=60)
                             CAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCT                                                                  <  SRR4302542.7304301/94‑1 (MQ=60)
                              AAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTA                                                                 >  SRR4302542.4118069/1‑94 (MQ=60)
                               AGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAA                                                                >  SRR4302542.5308870/1‑94 (MQ=60)
                                GCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAA                                                               <  SRR4302542.435070/94‑1 (MQ=60)
                                 CGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAT                                                              >  SRR4302542.980559/1‑94 (MQ=60)
                                 CGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAAT                                                              >  SRR4302542.506774/1‑94 (MQ=60)
                                  GTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATT                                                             >  SRR4302542.3764861/1‑94 (MQ=60)
                                  GTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATT                                                             >  SRR4302542.1194657/1‑94 (MQ=60)
                                  GTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATT                                                             >  SRR4302542.7381309/1‑94 (MQ=60)
                                  GTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATT                                                             >  SRR4302542.1275624/1‑94 (MQ=60)
                                   TCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTA                                                            <  SRR4302542.5374335/94‑1 (MQ=60)
                                    CGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAG                                                           >  SRR4302542.5663424/1‑94 (MQ=60)
                                    CGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAG                                                           <  SRR4302542.3081038/94‑1 (MQ=60)
                                    CGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAG                                                           >  SRR4302542.5181258/1‑94 (MQ=60)
                                    CGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAG                                                           <  SRR4302542.1460971/94‑1 (MQ=60)
                                      CATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAA                                                         >  SRR4302542.5595747/1‑94 (MQ=60)
                                      CACCCGGCTTTATCACGGGGCGTTTTCTTTTTGAATCCCATCACAACCCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAA                                                         <  SRR4302542.3934167/94‑1 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        <  SRR4302542.2894242/94‑1 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        >  SRR4302542.6678715/1‑94 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        <  SRR4302542.3408760/94‑1 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        >  SRR4302542.3060095/1‑94 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        <  SRR4302542.2711444/94‑1 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        >  SRR4302542.6012599/1‑94 (MQ=60)
                                       ATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAAC                                                        <  SRR4302542.7454541/94‑1 (MQ=60)
                                        TCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCCCCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACC                                                       <  SRR4302542.1175735/94‑1 (MQ=60)
                                        TCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACT                                                       <  SRR4302542.3161866/94‑1 (MQ=60)
                                        TCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACT                                                       >  SRR4302542.4685022/1‑94 (MQ=60)
                                        TCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACT                                                       <  SRR4302542.6369790/94‑1 (MQ=60)
                                         CCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTC                                                      >  SRR4302542.2715977/1‑94 (MQ=60)
                                         CCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTC                                                      >  SRR4302542.4257306/1‑94 (MQ=60)
                                         CCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTC                                                      <  SRR4302542.6237543/94‑1 (MQ=60)
                                         CCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTC                                                      <  SRR4302542.1903302/94‑1 (MQ=60)
                                          CGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCA                                                     >  SRR4302542.5970125/1‑94 (MQ=60)
                                          CGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCA                                                     <  SRR4302542.1271793/94‑1 (MQ=60)
                                          CGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCA                                                     >  SRR4302542.1912864/1‑94 (MQ=60)
                                           GGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCAT                                                    >  SRR4302542.6870209/1‑94 (MQ=60)
                                           GGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCAT                                                    <  SRR4302542.600066/94‑1 (MQ=60)
                                           GGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCAT                                                    <  SRR4302542.885761/94‑1 (MQ=60)
                                             CGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCC                                                  >  SRR4302542.453079/1‑94 (MQ=60)
                                             CGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCC                                                  <  SRR4302542.3616228/94‑1 (MQ=60)
                                              GTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCG                                                 <  SRR4302542.6780409/94‑1 (MQ=60)
                                              GTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCG                                                 >  SRR4302542.4858948/1‑94 (MQ=60)
                                                 ATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACC                                              <  SRR4302542.1008625/94‑1 (MQ=60)
                                                 ATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACC                                              >  SRR4302542.6264850/1‑94 (MQ=60)
                                                  TCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCA                                             >  SRR4302542.1969893/1‑94 (MQ=60)
                                                   CACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCAC                                            >  SRR4302542.608034/1‑94 (MQ=60)
                                                    ACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACA                                           >  SRR4302542.5458867/1‑94 (MQ=60)
                                                     CCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACAT                                          <  SRR4302542.1593954/94‑1 (MQ=60)
                                                     CCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACAT                                          >  SRR4302542.1048736/1‑94 (MQ=60)
                                                     CCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACAT                                          <  SRR4302542.4126201/94‑1 (MQ=60)
                                                      CGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATA                                         <  SRR4302542.5159975/94‑1 (MQ=60)
                                                      CGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATA                                         <  SRR4302542.4180342/94‑1 (MQ=60)
                                                       GGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAA                                        >  SRR4302542.909639/1‑94 (MQ=60)
                                                       GGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAA                                        <  SRR4302542.7169533/94‑1 (MQ=60)
                                                       GGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAA                                        >  SRR4302542.442206/1‑94 (MQ=60)
                                                        GGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAAC                                       <  SRR4302542.2206584/94‑1 (MQ=60)
                                                          CGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAA                                     >  SRR4302542.6127544/1‑94 (MQ=60)
                                                          CGTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAA                                     <  SRR4302542.7547899/94‑1 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    <  SRR4302542.4745692/94‑1 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.297213/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.1520407/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.1547729/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.6344835/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.4416786/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    <  SRR4302542.1997856/94‑1 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    >  SRR4302542.939121/1‑94 (MQ=60)
                                                           GTATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAAT                                    <  SRR4302542.5680723/94‑1 (MQ=60)
                                                            TATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATT                                   <  SRR4302542.5070981/94‑1 (MQ=60)
                                                            TATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATT                                   <  SRR4302542.2061821/94‑1 (MQ=60)
                                                            TATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATT                                   >  SRR4302542.7103434/1‑94 (MQ=60)
                                                            TATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATT                                   <  SRR4302542.2783915/94‑1 (MQ=60)
                                                             ATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTA                                  <  SRR4302542.165901/94‑1 (MQ=60)
                                                             ATTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCAACCACATAACAATTA                                  >  SRR4302542.5581039/1‑94 (MQ=60)
                                                              TTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTAT                                 <  SRR4302542.3558982/94‑1 (MQ=60)
                                                              TTCTTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTAT                                 >  SRR4302542.3147286/1‑94 (MQ=60)
                                                                CTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTT                               >  SRR4302542.5133050/1‑94 (MQ=60)
                                                                CTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTT                               <  SRR4302542.14220/94‑1 (MQ=60)
                                                                 TTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTT                              <  SRR4302542.7220341/94‑1 (MQ=60)
                                                                 TTTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTT                              >  SRR4302542.5982957/1‑94 (MQ=60)
                                                                  TTTTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTA                             <  SRR4302542.2556940/94‑1 (MQ=60)
                                                                    TTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACA                           <  SRR4302542.2741301/94‑1 (MQ=60)
                                                                    TTGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACA                           <  SRR4302542.633026/94‑1 (MQ=60)
                                                                     TGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACAT                          <  SRR4302542.1986263/94‑1 (MQ=60)
                                                                     TGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACAT                          <  SRR4302542.6601842/94‑1 (MQ=60)
                                                                     TGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACAT                          <  SRR4302542.6156544/94‑1 (MQ=60)
                                                                     TGAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACAT                          <  SRR4302542.780890/94‑1 (MQ=60)
                                                                      GAATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATA                         <  SRR4302542.3586524/94‑1 (MQ=60)
                                                                       AATCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATAC                        <  SRR4302542.5559614/94‑1 (MQ=60)
                                                                        ATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACT                       <  SRR4302542.3849659/94‑1 (MQ=60)
                                                                         TCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTG                      <  SRR4302542.1308466/94‑1 (MQ=60)
                                                                         TCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTG                      <  SRR4302542.6935412/94‑1 (MQ=60)
                                                                         TCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTG                      <  SRR4302542.3060587/94‑1 (MQ=60)
                                                                         TCCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTG                      <  SRR4302542.1281306/94‑1 (MQ=60)
                                                                          CCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGG                     >  SRR4302542.2374423/1‑94 (MQ=60)
                                                                          CCCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGG                     <  SRR4302542.148522/94‑1 (MQ=60)
                                                                           CCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGA                    <  SRR4302542.6614268/94‑1 (MQ=60)
                                                                           CCATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGA                    <  SRR4302542.6081687/94‑1 (MQ=60)
                                                                            CATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGAC                   <  SRR4302542.6767229/94‑1 (MQ=60)
                                                                            CATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGAC                   >  SRR4302542.5024854/1‑94 (MQ=60)
                                                                             ATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACA                  <  SRR4302542.3714943/94‑1 (MQ=60)
                                                                             ATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACA                  <  SRR4302542.4219485/94‑1 (MQ=60)
                                                                             ATCACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACA                  >  SRR4302542.6043768/1‑94 (MQ=60)
                                                                               CACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAAT                <  SRR4302542.871590/94‑1 (MQ=60)
                                                                                ACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATT               <  SRR4302542.6465104/94‑1 (MQ=60)
                                                                                ACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATT               >  SRR4302542.4463346/1‑94 (MQ=60)
                                                                                ACAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATT               <  SRR4302542.7273869/94‑1 (MQ=60)
                                                                                 CAAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTT              <  SRR4302542.3194148/94‑1 (MQ=60)
                                                                                  AAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTT             >  SRR4302542.5439860/1‑94 (MQ=60)
                                                                                  AAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTT             <  SRR4302542.7060415/94‑1 (MQ=60)
                                                                                  AAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTT             <  SRR4302542.3652110/94‑1 (MQ=60)
                                                                                  AAACCCCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTT             >  SRR4302542.5681471/1‑94 (MQ=60)
                                                                                      CCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGA         <  SRR4302542.3407870/94‑1 (MQ=60)
                                                                                       CCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAG        <  SRR4302542.331014/94‑1 (MQ=60)
                                                                                       CCGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAG        <  SRR4302542.4631122/94‑1 (MQ=60)
                                                                                        CGCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGC       >  SRR4302542.7343819/1‑94 (MQ=60)
                                                                                         GCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCT      <  SRR4302542.1192962/94‑1 (MQ=60)
                                                                                         GCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCT      <  SRR4302542.3106095/94‑1 (MQ=60)
                                                                                         GCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCT      <  SRR4302542.4205111/94‑1 (MQ=60)
                                                                                         GCACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCT      <  SRR4302542.4154941/94‑1 (MQ=60)
                                                                                           ACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAC    <  SRR4302542.2467063/94‑1 (MQ=60)
                                                                                           ACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAC    <  SRR4302542.1472215/94‑1 (MQ=60)
                                                                                           ACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTAC    <  SRR4302542.323319/94‑1 (MQ=60)
                                                                                           ACCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTCTACATACTGGACAATTTTATGAGCTAC    >  SRR4302542.2845027/1‑94 (MQ=60)
                                                                                            CCCCCCTTTTCCCTTTTCTCCGGCGCCGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACC   <  SRR4302542.2618974/94‑1 (MQ=60)
                                                                                            CCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACC   >  SRR4302542.7126172/1‑94 (MQ=60)
                                                                                            CCCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACC   <  SRR4302542.2319482/94‑1 (MQ=60)
                                                                                             CCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCC  <  SRR4302542.5948482/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCC  >  NC_000913/3229130‑3229316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑